Protein–RNA interactions for Protein: P28357

Hoxd9, Homeobox protein Hox-D9, mousemouse

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd9P28357 Gm38238-201ENSMUST00000194334 346 ntBASIC3.89□□□□□ -1.79
Hoxd9P28357 Gm43730-201ENSMUST00000199863 372 ntBASIC3.89□□□□□ -1.79
Hoxd9P28357 AC165164.2-201ENSMUST00000220313 392 ntTSL 3 BASIC3.89□□□□□ -1.79
Hoxd9P28357 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Hoxd9P28357 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC3.89□□□□□ -1.79
Hoxd9P28357 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
Hoxd9P28357 Vmn2r30-202ENSMUST00000174368 3688 ntTSL 2 BASIC3.89□□□□□ -1.79
Hoxd9P28357 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Hoxd9P28357 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Hoxd9P28357 Gm6902-202ENSMUST00000191169 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Hoxd9P28357 Gm7957-201ENSMUST00000207404 2602 ntBASIC3.89□□□□□ -1.79
Hoxd9P28357 Gm6176-202ENSMUST00000207633 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Hoxd9P28357 Vmn1r58-201ENSMUST00000108569 10140 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Hoxd9P28357 Zfp850-203ENSMUST00000180502 6163 ntAPPRIS P1 TSL 3 BASIC3.88□□□□□ -1.79
Hoxd9P28357 A230081H15Rik-201ENSMUST00000218326 2929 ntBASIC3.88□□□□□ -1.79
Hoxd9P28357 Vmn2r59-201ENSMUST00000168489 2598 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Hoxd9P28357 Dnah7c-204ENSMUST00000189749 12207 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Hoxd9P28357 Olfr644-203ENSMUST00000213991 3506 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Hoxd9P28357 Mmrn1-201ENSMUST00000129603 4477 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
Hoxd9P28357 Trav8-1-201ENSMUST00000103643 328 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Hoxd9P28357 Snord89-201ENSMUST00000104516 110 ntBASIC3.88□□□□□ -1.79
Hoxd9P28357 Gm25753-201ENSMUST00000116792 121 ntBASIC3.88□□□□□ -1.79
Hoxd9P28357 Gm12143-201ENSMUST00000119666 332 ntBASIC3.88□□□□□ -1.79
Hoxd9P28357 Mir1942-201ENSMUST00000157274 63 ntBASIC3.88□□□□□ -1.79
Hoxd9P28357 Gm26001-201ENSMUST00000157989 103 ntBASIC3.88□□□□□ -1.79
Hoxd9P28357 Gm26036-201ENSMUST00000158149 144 ntBASIC3.88□□□□□ -1.79
Hoxd9P28357 Gm17113-201ENSMUST00000170118 171 ntBASIC3.88□□□□□ -1.79
Hoxd9P28357 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC3.88□□□□□ -1.79
Hoxd9P28357 Gm14419-204ENSMUST00000178182 192 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Hoxd9P28357 Gm2004-202ENSMUST00000178872 192 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Hoxd9P28357 Gm14295-203ENSMUST00000179435 192 ntTSL 5 BASIC3.88□□□□□ -1.79
Hoxd9P28357 Mir6996-201ENSMUST00000183922 61 ntBASIC3.88□□□□□ -1.79
Hoxd9P28357 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC3.88□□□□□ -1.79
Hoxd9P28357 Gm38088-201ENSMUST00000195829 241 ntBASIC3.88□□□□□ -1.79
Hoxd9P28357 Gm44650-201ENSMUST00000206929 194 ntBASIC3.88□□□□□ -1.79
Hoxd9P28357 CT009711.3-201ENSMUST00000225882 250 ntBASIC3.88□□□□□ -1.79
Hoxd9P28357 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC3.88□□□□□ -1.79
Hoxd9P28357 Gm37478-201ENSMUST00000193624 3495 ntBASIC3.88□□□□□ -1.79
Hoxd9P28357 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Hoxd9P28357 AC122840.2-201ENSMUST00000221030 2659 ntBASIC3.88□□□□□ -1.79
Hoxd9P28357 Rbbp8-202ENSMUST00000115861 3523 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Hoxd9P28357 Ckap5-204ENSMUST00000111338 6665 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Hoxd9P28357 Steap2-204ENSMUST00000115426 10408 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Hoxd9P28357 AC124346.2-201ENSMUST00000217986 5083 ntBASIC3.87□□□□□ -1.79
Hoxd9P28357 Mir551b-201ENSMUST00000102165 98 ntBASIC3.87□□□□□ -1.79
Hoxd9P28357 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC3.87□□□□□ -1.79
Hoxd9P28357 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC3.87□□□□□ -1.79
Hoxd9P28357 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC3.87□□□□□ -1.79
Hoxd9P28357 Gm26482-201ENSMUST00000158015 62 ntBASIC3.87□□□□□ -1.79
Hoxd9P28357 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Hoxd9P28357 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Hoxd9P28357 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Hoxd9P28357 Gm17522-201ENSMUST00000178144 498 ntBASIC3.87□□□□□ -1.79
Hoxd9P28357 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Hoxd9P28357 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Hoxd9P28357 Gm44174-201ENSMUST00000205022 141 ntTSL 2 BASIC3.87□□□□□ -1.79
Hoxd9P28357 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC3.87□□□□□ -1.79
Hoxd9P28357 AC154358.1-201ENSMUST00000224871 218 ntBASIC3.87□□□□□ -1.79
Hoxd9P28357 Gm24461-201ENSMUST00000082735 103 ntBASIC3.87□□□□□ -1.79
Hoxd9P28357 Gm25851-201ENSMUST00000082794 107 ntBASIC3.87□□□□□ -1.79
Hoxd9P28357 Gm22421-201ENSMUST00000083058 107 ntBASIC3.87□□□□□ -1.79
Hoxd9P28357 Mir369-201ENSMUST00000083627 79 ntBASIC3.87□□□□□ -1.79
Hoxd9P28357 Olfr1316-202ENSMUST00000213696 4184 ntAPPRIS ALT1 TSL 5 BASIC3.87□□□□□ -1.79
Hoxd9P28357 Abi3bp-204ENSMUST00000171000 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
Hoxd9P28357 Atp1b4-201ENSMUST00000016471 4201 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Hoxd9P28357 Cubn-201ENSMUST00000091436 11262 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Hoxd9P28357 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
Hoxd9P28357 Gm37742-201ENSMUST00000193263 3979 ntBASIC3.86□□□□□ -1.79
Hoxd9P28357 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Hoxd9P28357 AC153150.1-201ENSMUST00000226065 3782 ntBASIC3.86□□□□□ -1.79
Hoxd9P28357 Gm22758-201ENSMUST00000102275 96 ntBASIC3.86□□□□□ -1.79
Hoxd9P28357 Gm22269-201ENSMUST00000104002 130 ntBASIC3.86□□□□□ -1.79
Hoxd9P28357 Gm22472-201ENSMUST00000104115 134 ntBASIC3.86□□□□□ -1.79
Hoxd9P28357 Gm22105-201ENSMUST00000116734 116 ntBASIC3.86□□□□□ -1.79
Hoxd9P28357 Gm25269-201ENSMUST00000122601 104 ntBASIC3.86□□□□□ -1.79
Hoxd9P28357 Gm28702-201ENSMUST00000188276 253 ntTSL 5 BASIC3.86□□□□□ -1.79
Hoxd9P28357 Gm29167-201ENSMUST00000190024 377 ntBASIC3.86□□□□□ -1.79
Hoxd9P28357 Gm37898-201ENSMUST00000193781 174 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Hoxd9P28357 Gm5358-201ENSMUST00000212814 353 ntBASIC3.86□□□□□ -1.79
Hoxd9P28357 Gm24948-201ENSMUST00000082866 207 ntBASIC3.86□□□□□ -1.79
Hoxd9P28357 Kctd4-201ENSMUST00000050120 3998 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Hoxd9P28357 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Hoxd9P28357 Olfr1274-ps-202ENSMUST00000216111 3395 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Hoxd9P28357 Vmn1r14-204ENSMUST00000227768 7005 ntAPPRIS P2 BASIC3.86□□□□□ -1.79
Hoxd9P28357 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Hoxd9P28357 Vmn1r72-203ENSMUST00000227010 6279 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Hoxd9P28357 Btbd35f10-201ENSMUST00000178621 1952 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Hoxd9P28357 Olfr711-201ENSMUST00000051715 3035 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
Hoxd9P28357 AC123035.1-201ENSMUST00000213846 2671 ntTSL 5 BASIC3.85□□□□□ -1.79
Hoxd9P28357 Gm15714-201ENSMUST00000117168 250 ntBASIC3.85□□□□□ -1.79
Hoxd9P28357 Gm14473-201ENSMUST00000122269 557 ntBASIC3.85□□□□□ -1.79
Hoxd9P28357 Gm25104-201ENSMUST00000122476 163 ntBASIC3.85□□□□□ -1.79
Hoxd9P28357 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC3.85□□□□□ -1.79
Hoxd9P28357 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Hoxd9P28357 Gm26460-201ENSMUST00000175061 126 ntBASIC3.85□□□□□ -1.79
Hoxd9P28357 Cox6b2-206ENSMUST00000182738 423 ntTSL 2 BASIC3.85□□□□□ -1.79
Hoxd9P28357 Gm29613-201ENSMUST00000185846 313 ntBASIC3.85□□□□□ -1.79
Hoxd9P28357 Gm29604-201ENSMUST00000187176 163 ntBASIC3.85□□□□□ -1.79
Hoxd9P28357 Gm29544-201ENSMUST00000188860 313 ntBASIC3.85□□□□□ -1.79
Hoxd9P28357 Gm28808-201ENSMUST00000190978 313 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms