Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm23862-201ENSMUST00000180342 94 ntBASIC1.56□□□□□ -2.16
Cdx1P18111 Gm27544-201ENSMUST00000185069 155 ntBASIC1.56□□□□□ -2.16
Cdx1P18111 Gm44408-201ENSMUST00000200205 66 ntBASIC1.56□□□□□ -2.16
Cdx1P18111 Gm7692-201ENSMUST00000213534 409 ntBASIC1.56□□□□□ -2.16
Cdx1P18111 Gm22978-201ENSMUST00000082607 160 ntBASIC1.56□□□□□ -2.16
Cdx1P18111 Mir429-201ENSMUST00000083493 83 ntBASIC1.56□□□□□ -2.16
Cdx1P18111 Gm37602-201ENSMUST00000195187 3310 ntBASIC1.56□□□□□ -2.16
Cdx1P18111 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
Cdx1P18111 Gm23010-201ENSMUST00000104151 126 ntBASIC1.55□□□□□ -2.16
Cdx1P18111 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC1.55□□□□□ -2.16
Cdx1P18111 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC1.55□□□□□ -2.16
Cdx1P18111 Trav20-201ENSMUST00000142754 347 ntBASIC1.55□□□□□ -2.16
Cdx1P18111 Gm25115-201ENSMUST00000157187 140 ntBASIC1.55□□□□□ -2.16
Cdx1P18111 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
Cdx1P18111 Vmn2r-ps84-201ENSMUST00000173377 897 ntBASIC1.55□□□□□ -2.16
Cdx1P18111 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
Cdx1P18111 Mup-ps11-201ENSMUST00000178040 545 ntBASIC1.55□□□□□ -2.16
Cdx1P18111 Mup-ps3-201ENSMUST00000178315 545 ntBASIC1.55□□□□□ -2.16
Cdx1P18111 Mir7016-201ENSMUST00000184308 72 ntBASIC1.55□□□□□ -2.16
Cdx1P18111 Gm29550-201ENSMUST00000185543 285 ntBASIC1.55□□□□□ -2.16
Cdx1P18111 Gm10193-201ENSMUST00000188288 231 ntBASIC1.55□□□□□ -2.16
Cdx1P18111 Gm42947-201ENSMUST00000198230 675 ntTSL 2 BASIC1.55□□□□□ -2.16
Cdx1P18111 Gm42475-201ENSMUST00000201212 295 ntBASIC1.55□□□□□ -2.16
Cdx1P18111 Gm44128-201ENSMUST00000204909 219 ntBASIC1.55□□□□□ -2.16
Cdx1P18111 CT033785.1-201ENSMUST00000224872 272 ntBASIC1.55□□□□□ -2.16
Cdx1P18111 AC154424.1-201ENSMUST00000225883 799 ntBASIC1.55□□□□□ -2.16
Cdx1P18111 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC1.55□□□□□ -2.16
Cdx1P18111 Gm44114-201ENSMUST00000203270 2727 ntBASIC1.54□□□□□ -2.16
Cdx1P18111 Gm6444-201ENSMUST00000119611 458 ntBASIC1.54□□□□□ -2.16
Cdx1P18111 Gm5396-201ENSMUST00000121222 532 ntBASIC1.54□□□□□ -2.16
Cdx1P18111 Gm24598-201ENSMUST00000122510 74 ntBASIC1.54□□□□□ -2.16
Cdx1P18111 n-R5s159-201ENSMUST00000122681 120 ntBASIC1.54□□□□□ -2.16
Cdx1P18111 Gm22793-201ENSMUST00000157227 330 ntBASIC1.54□□□□□ -2.16
Cdx1P18111 Gm24910-201ENSMUST00000157289 272 ntBASIC1.54□□□□□ -2.16
Cdx1P18111 Gm22217-201ENSMUST00000157556 313 ntBASIC1.54□□□□□ -2.16
Cdx1P18111 Gm24885-201ENSMUST00000158783 270 ntBASIC1.54□□□□□ -2.16
Cdx1P18111 Gm16043-201ENSMUST00000160030 616 ntTSL 3 BASIC1.54□□□□□ -2.16
Cdx1P18111 Gm23289-201ENSMUST00000175615 108 ntBASIC1.54□□□□□ -2.16
Cdx1P18111 Gm22800-201ENSMUST00000175627 94 ntBASIC1.54□□□□□ -2.16
Cdx1P18111 4932441J04Rik-201ENSMUST00000180708 729 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
Cdx1P18111 Gm37579-201ENSMUST00000194291 142 ntBASIC1.54□□□□□ -2.16
Cdx1P18111 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC1.54□□□□□ -2.16
Cdx1P18111 Olfr499-ps1-201ENSMUST00000208811 930 ntBASIC1.54□□□□□ -2.16
Cdx1P18111 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC1.54□□□□□ -2.16
Cdx1P18111 AC129085.5-201ENSMUST00000225468 400 ntBASIC1.54□□□□□ -2.16
Cdx1P18111 Gm25853-201ENSMUST00000082793 132 ntBASIC1.54□□□□□ -2.16
Cdx1P18111 Mir10a-201ENSMUST00000083585 110 ntBASIC1.54□□□□□ -2.16
Cdx1P18111 Gm25938-201ENSMUST00000104139 166 ntBASIC1.53□□□□□ -2.16
Cdx1P18111 Gm14638-201ENSMUST00000121338 216 ntBASIC1.53□□□□□ -2.16
Cdx1P18111 Gm24262-201ENSMUST00000157431 144 ntBASIC1.53□□□□□ -2.16
Cdx1P18111 Gm22338-201ENSMUST00000157715 129 ntBASIC1.53□□□□□ -2.16
Cdx1P18111 Gm22551-201ENSMUST00000157795 103 ntBASIC1.53□□□□□ -2.16
Cdx1P18111 Gm23342-201ENSMUST00000158958 115 ntBASIC1.53□□□□□ -2.16
Cdx1P18111 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC1.53□□□□□ -2.16
Cdx1P18111 Gm24656-201ENSMUST00000177548 132 ntBASIC1.53□□□□□ -2.16
Cdx1P18111 Gm25730-201ENSMUST00000178753 165 ntBASIC1.53□□□□□ -2.16
Cdx1P18111 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC1.53□□□□□ -2.16
Cdx1P18111 Gm28438-201ENSMUST00000188299 345 ntBASIC1.53□□□□□ -2.16
Cdx1P18111 Gm37778-201ENSMUST00000191732 190 ntBASIC1.53□□□□□ -2.16
Cdx1P18111 Gm43431-201ENSMUST00000198577 340 ntBASIC1.53□□□□□ -2.16
Cdx1P18111 Gm42960-201ENSMUST00000202160 241 ntBASIC1.53□□□□□ -2.16
Cdx1P18111 Gm45382-201ENSMUST00000210607 151 ntBASIC1.53□□□□□ -2.16
Cdx1P18111 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC1.53□□□□□ -2.16
Cdx1P18111 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC1.53□□□□□ -2.16
Cdx1P18111 AC027184.1-201ENSMUST00000226991 424 ntBASIC1.53□□□□□ -2.16
Cdx1P18111 AC120553.1-201ENSMUST00000227313 260 ntBASIC1.53□□□□□ -2.16
Cdx1P18111 AC115357.1-201ENSMUST00000227575 466 ntBASIC1.53□□□□□ -2.16
Cdx1P18111 Ear14-201ENSMUST00000049559 468 ntBASIC1.53□□□□□ -2.16
Cdx1P18111 mt-Nd3-201ENSMUST00000082411 348 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
Cdx1P18111 Mir410-201ENSMUST00000083563 81 ntBASIC1.53□□□□□ -2.16
Cdx1P18111 Gm22723-201ENSMUST00000083820 129 ntBASIC1.53□□□□□ -2.16
Cdx1P18111 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC1.52□□□□□ -2.17
Cdx1P18111 Gm37096-201ENSMUST00000192317 2058 ntBASIC1.52□□□□□ -2.17
Cdx1P18111 Gm14624-201ENSMUST00000117746 192 ntBASIC1.52□□□□□ -2.17
Cdx1P18111 Gm15659-201ENSMUST00000118881 341 ntBASIC1.52□□□□□ -2.17
Cdx1P18111 Gm14013-201ENSMUST00000119006 270 ntBASIC1.52□□□□□ -2.17
Cdx1P18111 Gm13409-201ENSMUST00000122072 546 ntBASIC1.52□□□□□ -2.17
Cdx1P18111 Gm22597-201ENSMUST00000157602 80 ntBASIC1.52□□□□□ -2.17
Cdx1P18111 Gm25051-201ENSMUST00000158602 249 ntBASIC1.52□□□□□ -2.17
Cdx1P18111 Gm23619-201ENSMUST00000178411 94 ntBASIC1.52□□□□□ -2.17
Cdx1P18111 Gm24168-201ENSMUST00000178825 107 ntBASIC1.52□□□□□ -2.17
Cdx1P18111 Gm25474-201ENSMUST00000179052 94 ntBASIC1.52□□□□□ -2.17
Cdx1P18111 Gm22047-201ENSMUST00000179176 94 ntBASIC1.52□□□□□ -2.17
Cdx1P18111 Mir7225-201ENSMUST00000184178 54 ntBASIC1.52□□□□□ -2.17
Cdx1P18111 Gm18357-201ENSMUST00000188184 580 ntBASIC1.52□□□□□ -2.17
Cdx1P18111 Mir7021-201ENSMUST00000197026 63 ntBASIC1.52□□□□□ -2.17
Cdx1P18111 Gm44533-201ENSMUST00000207782 268 ntBASIC1.52□□□□□ -2.17
Cdx1P18111 Gm45365-201ENSMUST00000209489 256 ntBASIC1.52□□□□□ -2.17
Cdx1P18111 Gm45654-201ENSMUST00000210980 123 ntBASIC1.52□□□□□ -2.17
Cdx1P18111 Gm18774-201ENSMUST00000218269 601 ntBASIC1.52□□□□□ -2.17
Cdx1P18111 AC168062.3-201ENSMUST00000227025 165 ntBASIC1.52□□□□□ -2.17
Cdx1P18111 Olfr821-201ENSMUST00000054364 933 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
Cdx1P18111 Olfr385-201ENSMUST00000071553 939 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
Cdx1P18111 Gm24045-201ENSMUST00000083113 98 ntBASIC1.52□□□□□ -2.17
Cdx1P18111 Gm23100-201ENSMUST00000083455 141 ntBASIC1.52□□□□□ -2.17
Cdx1P18111 Gm22578-201ENSMUST00000083730 107 ntBASIC1.52□□□□□ -2.17
Cdx1P18111 Gm23503-201ENSMUST00000083903 107 ntBASIC1.52□□□□□ -2.17
Cdx1P18111 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
Cdx1P18111 Gm42664-201ENSMUST00000199417 3239 ntBASIC1.52□□□□□ -2.17
Cdx1P18111 4930440C22Rik-201ENSMUST00000185490 1565 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 127.6 ms