Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Vmn1r42-202ENSMUST00000226436 4045 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Clp1Q99LI9 Macc1-204ENSMUST00000222058 4193 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Clp1Q99LI9 AC156025.1-201ENSMUST00000223597 3551 ntBASIC4.11□□□□□ -1.75
Clp1Q99LI9 Chl1-201ENSMUST00000066905 7562 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
Clp1Q99LI9 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Clp1Q99LI9 Gm26273-201ENSMUST00000104180 131 ntBASIC4.11□□□□□ -1.75
Clp1Q99LI9 Gm13167-201ENSMUST00000118554 578 ntBASIC4.11□□□□□ -1.75
Clp1Q99LI9 Tarbp2-207ENSMUST00000142114 420 ntTSL 5 BASIC4.11□□□□□ -1.75
Clp1Q99LI9 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC4.11□□□□□ -1.75
Clp1Q99LI9 Gm25615-201ENSMUST00000177836 94 ntBASIC4.11□□□□□ -1.75
Clp1Q99LI9 Gm17067-202ENSMUST00000180131 123 ntBASIC4.11□□□□□ -1.75
Clp1Q99LI9 Gm27465-201ENSMUST00000184290 91 ntBASIC4.11□□□□□ -1.75
Clp1Q99LI9 AC161054.1-201ENSMUST00000214319 184 ntBASIC4.11□□□□□ -1.75
Clp1Q99LI9 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC4.11□□□□□ -1.75
Clp1Q99LI9 AC167669.4-201ENSMUST00000225967 140 ntBASIC4.11□□□□□ -1.75
Clp1Q99LI9 Gm26495-201ENSMUST00000083152 137 ntBASIC4.11□□□□□ -1.75
Clp1Q99LI9 Gm23462-201ENSMUST00000083264 104 ntBASIC4.11□□□□□ -1.75
Clp1Q99LI9 AC159193.2-201ENSMUST00000220865 4251 ntBASIC4.11□□□□□ -1.75
Clp1Q99LI9 Olfr599-202ENSMUST00000214329 2183 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Clp1Q99LI9 Gm37747-201ENSMUST00000193717 4003 ntBASIC4.11□□□□□ -1.75
Clp1Q99LI9 Jmjd1c-206ENSMUST00000173689 8609 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
Clp1Q99LI9 Gm45389-201ENSMUST00000211163 3399 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Clp1Q99LI9 Ndst4-205ENSMUST00000174648 4996 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Clp1Q99LI9 Vmn1r46-202ENSMUST00000205088 10770 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
Clp1Q99LI9 AC121997.2-203ENSMUST00000228613 4192 ntBASIC4.1□□□□□ -1.75
Clp1Q99LI9 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Clp1Q99LI9 Gm43230-201ENSMUST00000200980 2129 ntBASIC4.1□□□□□ -1.75
Clp1Q99LI9 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
Clp1Q99LI9 Gm5798-201ENSMUST00000164613 1751 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Clp1Q99LI9 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Clp1Q99LI9 Olfr709-ps1-202ENSMUST00000215468 5078 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Clp1Q99LI9 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC4.1□□□□□ -1.75
Clp1Q99LI9 Gm13076-201ENSMUST00000118041 204 ntBASIC4.1□□□□□ -1.75
Clp1Q99LI9 Gm14652-201ENSMUST00000118479 235 ntBASIC4.1□□□□□ -1.75
Clp1Q99LI9 Gm11204-201ENSMUST00000122438 147 ntBASIC4.1□□□□□ -1.75
Clp1Q99LI9 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC4.1□□□□□ -1.75
Clp1Q99LI9 Gm25066-201ENSMUST00000158145 123 ntBASIC4.1□□□□□ -1.75
Clp1Q99LI9 Mir7578-201ENSMUST00000183455 82 ntBASIC4.1□□□□□ -1.75
Clp1Q99LI9 Gm36964-201ENSMUST00000191876 198 ntBASIC4.1□□□□□ -1.75
Clp1Q99LI9 Gm43427-201ENSMUST00000198188 331 ntBASIC4.1□□□□□ -1.75
Clp1Q99LI9 Gm42774-201ENSMUST00000198854 283 ntBASIC4.1□□□□□ -1.75
Clp1Q99LI9 E330011O21Rik-203ENSMUST00000210555 455 ntTSL 5 BASIC4.1□□□□□ -1.75
Clp1Q99LI9 Usp34-208ENSMUST00000180046 12200 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Clp1Q99LI9 AC132237.1-201ENSMUST00000220950 4475 ntBASIC4.1□□□□□ -1.75
Clp1Q99LI9 Olfr577-203ENSMUST00000215237 3144 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Clp1Q99LI9 Olfr1454-203ENSMUST00000214695 4049 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Clp1Q99LI9 Cfh-203ENSMUST00000111977 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
Clp1Q99LI9 Rps6ka3-204ENSMUST00000112493 3671 ntTSL 5 BASIC4.09□□□□□ -1.75
Clp1Q99LI9 Gm8473-201ENSMUST00000176697 1885 ntBASIC4.09□□□□□ -1.75
Clp1Q99LI9 Gm44120-201ENSMUST00000203022 3023 ntBASIC4.09□□□□□ -1.75
Clp1Q99LI9 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Clp1Q99LI9 Traj31-201ENSMUST00000103710 57 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Clp1Q99LI9 Gm14448-201ENSMUST00000116383 210 ntBASIC4.09□□□□□ -1.75
Clp1Q99LI9 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC4.09□□□□□ -1.75
Clp1Q99LI9 Gm16032-201ENSMUST00000118534 168 ntBASIC4.09□□□□□ -1.75
Clp1Q99LI9 Gm11704-201ENSMUST00000120031 214 ntBASIC4.09□□□□□ -1.75
Clp1Q99LI9 Gm25015-201ENSMUST00000158400 128 ntBASIC4.09□□□□□ -1.75
Clp1Q99LI9 Ubl5-209ENSMUST00000161882 489 ntTSL 3 BASIC4.09□□□□□ -1.75
Clp1Q99LI9 Mir7667-201ENSMUST00000183866 63 ntBASIC4.09□□□□□ -1.75
Clp1Q99LI9 Gm29005-201ENSMUST00000186773 320 ntBASIC4.09□□□□□ -1.75
Clp1Q99LI9 Gm32381-201ENSMUST00000203192 476 ntBASIC4.09□□□□□ -1.75
Clp1Q99LI9 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC4.09□□□□□ -1.75
Clp1Q99LI9 Gm19790-201ENSMUST00000214414 251 ntBASIC4.09□□□□□ -1.75
Clp1Q99LI9 Gm35405-201ENSMUST00000218754 400 ntBASIC4.09□□□□□ -1.75
Clp1Q99LI9 AC161758.2-201ENSMUST00000228513 218 ntBASIC4.09□□□□□ -1.75
Clp1Q99LI9 Gm25480-201ENSMUST00000083217 133 ntBASIC4.09□□□□□ -1.75
Clp1Q99LI9 Mir101b-201ENSMUST00000083622 97 ntBASIC4.09□□□□□ -1.75
Clp1Q99LI9 Mir504-201ENSMUST00000093602 79 ntBASIC4.09□□□□□ -1.75
Clp1Q99LI9 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
Clp1Q99LI9 Gm36951-201ENSMUST00000193840 2687 ntBASIC4.09□□□□□ -1.75
Clp1Q99LI9 Nebl-202ENSMUST00000124270 8079 ntTSL 5 BASIC4.09□□□□□ -1.76
Clp1Q99LI9 Gm9911-201ENSMUST00000211467 2802 ntBASIC4.08□□□□□ -1.76
Clp1Q99LI9 Olfr59-204ENSMUST00000214048 3363 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
Clp1Q99LI9 4932415D10Rik-202ENSMUST00000217661 15111 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Clp1Q99LI9 Nbeal1-203ENSMUST00000160834 15731 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Clp1Q99LI9 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Clp1Q99LI9 Gm25168-201ENSMUST00000104189 132 ntBASIC4.08□□□□□ -1.76
Clp1Q99LI9 Gm8935-202ENSMUST00000105727 1959 ntBASIC4.08□□□□□ -1.76
Clp1Q99LI9 Gm14215-201ENSMUST00000120578 221 ntBASIC4.08□□□□□ -1.76
Clp1Q99LI9 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC4.08□□□□□ -1.76
Clp1Q99LI9 Gm22883-201ENSMUST00000157376 106 ntBASIC4.08□□□□□ -1.76
Clp1Q99LI9 Gm25835-201ENSMUST00000158917 144 ntBASIC4.08□□□□□ -1.76
Clp1Q99LI9 Fam46d-204ENSMUST00000167154 3004 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
Clp1Q99LI9 Gm24811-201ENSMUST00000175313 100 ntBASIC4.08□□□□□ -1.76
Clp1Q99LI9 Gm25535-201ENSMUST00000175364 125 ntBASIC4.08□□□□□ -1.76
Clp1Q99LI9 Gm43220-201ENSMUST00000199299 282 ntBASIC4.08□□□□□ -1.76
Clp1Q99LI9 Gm44355-201ENSMUST00000200417 104 ntBASIC4.08□□□□□ -1.76
Clp1Q99LI9 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
Clp1Q99LI9 Gm45543-201ENSMUST00000209327 88 ntBASIC4.08□□□□□ -1.76
Clp1Q99LI9 Gm18015-201ENSMUST00000214879 316 ntBASIC4.08□□□□□ -1.76
Clp1Q99LI9 AC165164.2-201ENSMUST00000220313 392 ntTSL 3 BASIC4.08□□□□□ -1.76
Clp1Q99LI9 AC166830.2-201ENSMUST00000225821 196 ntBASIC4.08□□□□□ -1.76
Clp1Q99LI9 Olfr263-202ENSMUST00000215804 3963 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Clp1Q99LI9 Olfr835-202ENSMUST00000213018 2690 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Clp1Q99LI9 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Clp1Q99LI9 Vmn1r81-205ENSMUST00000228764 13763 ntAPPRIS P2 BASIC4.07□□□□□ -1.76
Clp1Q99LI9 Zfp72-202ENSMUST00000223163 4153 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Clp1Q99LI9 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Clp1Q99LI9 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Clp1Q99LI9 Gm6829-201ENSMUST00000119858 360 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 83.4 ms