Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm43735-201ENSMUST00000198245 809 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Trim47Q8C0E3 Gm44030-201ENSMUST00000204865 432 ntBASIC4.49□□□□□ -1.69
Trim47Q8C0E3 Fth-ps3-201ENSMUST00000210405 358 ntBASIC4.49□□□□□ -1.69
Trim47Q8C0E3 AC160134.1-201ENSMUST00000213450 551 ntBASIC4.49□□□□□ -1.69
Trim47Q8C0E3 Mir34b-201ENSMUST00000083558 84 ntBASIC4.49□□□□□ -1.69
Trim47Q8C0E3 Gm45804-201ENSMUST00000212137 3435 ntBASIC4.49□□□□□ -1.69
Trim47Q8C0E3 Gm14062-201ENSMUST00000134795 4134 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Trim47Q8C0E3 Olfr1469-202ENSMUST00000216910 4106 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Trim47Q8C0E3 Eya4-208ENSMUST00000220299 3615 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Trim47Q8C0E3 Iigp1-201ENSMUST00000032473 3121 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
Trim47Q8C0E3 Gm20515-201ENSMUST00000174440 4824 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Trim47Q8C0E3 Olfr64-201ENSMUST00000081748 5001 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Trim47Q8C0E3 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Trim47Q8C0E3 Vmn1r42-202ENSMUST00000226436 4045 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Trim47Q8C0E3 Nlrp4f-201ENSMUST00000037372 3527 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Trim47Q8C0E3 Vmn1r185-212ENSMUST00000228633 5385 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Trim47Q8C0E3 Olfr1226-207ENSMUST00000220416 3387 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Trim47Q8C0E3 Gm4736-201ENSMUST00000100870 380 ntBASIC4.48□□□□□ -1.69
Trim47Q8C0E3 Gm25169-201ENSMUST00000104190 129 ntBASIC4.48□□□□□ -1.69
Trim47Q8C0E3 Gm24403-201ENSMUST00000104616 130 ntBASIC4.48□□□□□ -1.69
Trim47Q8C0E3 Gm22051-201ENSMUST00000117002 127 ntBASIC4.48□□□□□ -1.69
Trim47Q8C0E3 Gm16186-201ENSMUST00000120132 216 ntBASIC4.48□□□□□ -1.69
Trim47Q8C0E3 Gm15799-201ENSMUST00000120899 289 ntBASIC4.48□□□□□ -1.69
Trim47Q8C0E3 Gm13852-201ENSMUST00000122350 242 ntBASIC4.48□□□□□ -1.69
Trim47Q8C0E3 Gm26104-201ENSMUST00000157250 108 ntBASIC4.48□□□□□ -1.69
Trim47Q8C0E3 Gm24877-201ENSMUST00000158779 116 ntBASIC4.48□□□□□ -1.69
Trim47Q8C0E3 Gm19774-201ENSMUST00000190667 114 ntBASIC4.48□□□□□ -1.69
Trim47Q8C0E3 Mir3969-201ENSMUST00000197106 92 ntBASIC4.48□□□□□ -1.69
Trim47Q8C0E3 Gm22620-201ENSMUST00000082700 133 ntBASIC4.48□□□□□ -1.69
Trim47Q8C0E3 Gm23303-201ENSMUST00000082714 152 ntBASIC4.48□□□□□ -1.69
Trim47Q8C0E3 Gm23462-201ENSMUST00000083264 104 ntBASIC4.48□□□□□ -1.69
Trim47Q8C0E3 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC4.48□□□□□ -1.69
Trim47Q8C0E3 Gm13630-201ENSMUST00000127849 3650 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Trim47Q8C0E3 Cfh-203ENSMUST00000111977 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
Trim47Q8C0E3 Gm37792-201ENSMUST00000195761 3413 ntBASIC4.48□□□□□ -1.69
Trim47Q8C0E3 Gm36960-201ENSMUST00000195491 2035 ntBASIC4.48□□□□□ -1.69
Trim47Q8C0E3 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Trim47Q8C0E3 Ano5-201ENSMUST00000043944 7785 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Trim47Q8C0E3 Olfr1309-206ENSMUST00000217452 5257 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Trim47Q8C0E3 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
Trim47Q8C0E3 Gm37345-201ENSMUST00000193062 3138 ntBASIC4.47□□□□□ -1.69
Trim47Q8C0E3 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Trim47Q8C0E3 Zfp808-201ENSMUST00000099449 2571 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Trim47Q8C0E3 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Trim47Q8C0E3 Gm26135-201ENSMUST00000101993 72 ntBASIC4.47□□□□□ -1.69
Trim47Q8C0E3 Gm24281-201ENSMUST00000104234 136 ntBASIC4.47□□□□□ -1.69
Trim47Q8C0E3 Gm24318-201ENSMUST00000104490 131 ntBASIC4.47□□□□□ -1.69
Trim47Q8C0E3 Gm24067-201ENSMUST00000104514 85 ntBASIC4.47□□□□□ -1.69
Trim47Q8C0E3 Gm15613-201ENSMUST00000118396 326 ntBASIC4.47□□□□□ -1.69
Trim47Q8C0E3 Gm14282-201ENSMUST00000119484 240 ntBASIC4.47□□□□□ -1.69
Trim47Q8C0E3 Gm15067-201ENSMUST00000119534 156 ntBASIC4.47□□□□□ -1.69
Trim47Q8C0E3 Gm12143-201ENSMUST00000119666 332 ntBASIC4.47□□□□□ -1.69
Trim47Q8C0E3 Gm13687-201ENSMUST00000119857 282 ntBASIC4.47□□□□□ -1.69
Trim47Q8C0E3 Gm13443-201ENSMUST00000120770 555 ntBASIC4.47□□□□□ -1.69
Trim47Q8C0E3 Gm14564-201ENSMUST00000122159 294 ntBASIC4.47□□□□□ -1.69
Trim47Q8C0E3 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC4.47□□□□□ -1.69
Trim47Q8C0E3 Snord50b-201ENSMUST00000178497 72 ntBASIC4.47□□□□□ -1.69
Trim47Q8C0E3 Gm23816-201ENSMUST00000179617 132 ntBASIC4.47□□□□□ -1.69
Trim47Q8C0E3 Gm7497-201ENSMUST00000183064 1003 ntBASIC4.47□□□□□ -1.69
Trim47Q8C0E3 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC4.47□□□□□ -1.69
Trim47Q8C0E3 Mir7657-201ENSMUST00000196051 57 ntBASIC4.47□□□□□ -1.69
Trim47Q8C0E3 AC152062.1-201ENSMUST00000218129 386 ntBASIC4.47□□□□□ -1.69
Trim47Q8C0E3 Gm17829-201ENSMUST00000219782 344 ntBASIC4.47□□□□□ -1.69
Trim47Q8C0E3 CT010511.1-201ENSMUST00000224570 315 ntBASIC4.47□□□□□ -1.69
Trim47Q8C0E3 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Trim47Q8C0E3 Gm24163-201ENSMUST00000093660 132 ntBASIC4.47□□□□□ -1.69
Trim47Q8C0E3 Gm28362-201ENSMUST00000189430 2420 ntBASIC4.47□□□□□ -1.69
Trim47Q8C0E3 Gm10811-201ENSMUST00000221985 2448 ntBASIC4.47□□□□□ -1.69
Trim47Q8C0E3 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC4.46□□□□□ -1.69
Trim47Q8C0E3 Olfr418-202ENSMUST00000213420 4388 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
Trim47Q8C0E3 Abca16-201ENSMUST00000056042 5085 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.69
Trim47Q8C0E3 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
Trim47Q8C0E3 Zfp595-203ENSMUST00000168892 4040 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.69
Trim47Q8C0E3 Stk-ps2-201ENSMUST00000051224 4667 ntTSL 2 BASIC4.46□□□□□ -1.7
Trim47Q8C0E3 Gm15902-202ENSMUST00000219623 3477 ntBASIC4.46□□□□□ -1.7
Trim47Q8C0E3 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC4.46□□□□□ -1.7
Trim47Q8C0E3 AC153964.2-201ENSMUST00000217704 2474 ntBASIC4.46□□□□□ -1.7
Trim47Q8C0E3 Olfr843-202ENSMUST00000214019 7499 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Trim47Q8C0E3 Gm12449-201ENSMUST00000117572 234 ntBASIC4.46□□□□□ -1.7
Trim47Q8C0E3 Gm14593-201ENSMUST00000119948 294 ntBASIC4.46□□□□□ -1.7
Trim47Q8C0E3 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC4.46□□□□□ -1.7
Trim47Q8C0E3 Gm26482-201ENSMUST00000158015 62 ntBASIC4.46□□□□□ -1.7
Trim47Q8C0E3 Gm22075-201ENSMUST00000158599 192 ntBASIC4.46□□□□□ -1.7
Trim47Q8C0E3 Gm25646-201ENSMUST00000178527 79 ntBASIC4.46□□□□□ -1.7
Trim47Q8C0E3 Gm27477-201ENSMUST00000184649 143 ntBASIC4.46□□□□□ -1.7
Trim47Q8C0E3 Gm43814-201ENSMUST00000197851 413 ntBASIC4.46□□□□□ -1.7
Trim47Q8C0E3 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC4.46□□□□□ -1.7
Trim47Q8C0E3 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC4.46□□□□□ -1.7
Trim47Q8C0E3 Gm22683-201ENSMUST00000082854 137 ntBASIC4.46□□□□□ -1.7
Trim47Q8C0E3 Gm25481-201ENSMUST00000083221 158 ntBASIC4.46□□□□□ -1.7
Trim47Q8C0E3 Mir370-201ENSMUST00000083499 79 ntBASIC4.46□□□□□ -1.7
Trim47Q8C0E3 Olfr194-203ENSMUST00000216519 3705 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Trim47Q8C0E3 Gm43958-201ENSMUST00000204360 3544 ntBASIC4.46□□□□□ -1.7
Trim47Q8C0E3 Gm7452-202ENSMUST00000202891 3039 ntBASIC4.46□□□□□ -1.7
Trim47Q8C0E3 Atad1-201ENSMUST00000070210 2813 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Trim47Q8C0E3 Olfr1258-203ENSMUST00000213720 7098 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Trim47Q8C0E3 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Trim47Q8C0E3 Gm5127-202ENSMUST00000101297 1809 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Trim47Q8C0E3 Olfr437-202ENSMUST00000205175 2952 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Trim47Q8C0E3 AC154313.1-201ENSMUST00000217755 3841 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 84.9 ms