Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Gm11490-201ENSMUST00000118128 272 ntBASIC3.81□□□□□ -1.8
Trim28Q62318 Gm6574-201ENSMUST00000120037 362 ntBASIC3.81□□□□□ -1.8
Trim28Q62318 Gm23887-201ENSMUST00000122683 172 ntBASIC3.81□□□□□ -1.8
Trim28Q62318 Gm22849-201ENSMUST00000157713 307 ntBASIC3.81□□□□□ -1.8
Trim28Q62318 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Trim28Q62318 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
Trim28Q62318 Gm17020-201ENSMUST00000172274 274 ntBASIC3.81□□□□□ -1.8
Trim28Q62318 Gm25198-201ENSMUST00000178574 110 ntBASIC3.81□□□□□ -1.8
Trim28Q62318 Gm24168-201ENSMUST00000178825 107 ntBASIC3.81□□□□□ -1.8
Trim28Q62318 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC3.81□□□□□ -1.8
Trim28Q62318 Gm27532-201ENSMUST00000183726 113 ntBASIC3.81□□□□□ -1.8
Trim28Q62318 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC3.81□□□□□ -1.8
Trim28Q62318 Gm37801-201ENSMUST00000194754 274 ntBASIC3.81□□□□□ -1.8
Trim28Q62318 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Trim28Q62318 Gm42665-201ENSMUST00000202100 586 ntBASIC3.81□□□□□ -1.8
Trim28Q62318 Gm44825-201ENSMUST00000207557 150 ntBASIC3.81□□□□□ -1.8
Trim28Q62318 Gm44598-201ENSMUST00000207566 150 ntBASIC3.81□□□□□ -1.8
Trim28Q62318 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC3.81□□□□□ -1.8
Trim28Q62318 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Trim28Q62318 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC3.81□□□□□ -1.8
Trim28Q62318 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Trim28Q62318 Ifi203-ps-201ENSMUST00000155076 2556 ntBASIC3.8□□□□□ -1.8
Trim28Q62318 Olfr124-203ENSMUST00000216478 4416 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Trim28Q62318 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Trim28Q62318 Gm23841-201ENSMUST00000116951 114 ntBASIC3.8□□□□□ -1.8
Trim28Q62318 Gm13903-201ENSMUST00000120945 193 ntBASIC3.8□□□□□ -1.8
Trim28Q62318 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC3.8□□□□□ -1.8
Trim28Q62318 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC3.8□□□□□ -1.8
Trim28Q62318 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC3.8□□□□□ -1.8
Trim28Q62318 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC3.8□□□□□ -1.8
Trim28Q62318 Gm24061-201ENSMUST00000157489 120 ntBASIC3.8□□□□□ -1.8
Trim28Q62318 Gm22598-201ENSMUST00000157600 127 ntBASIC3.8□□□□□ -1.8
Trim28Q62318 Gm23892-201ENSMUST00000158105 130 ntBASIC3.8□□□□□ -1.8
Trim28Q62318 Gm17119-201ENSMUST00000163943 280 ntBASIC3.8□□□□□ -1.8
Trim28Q62318 Snord93-201ENSMUST00000175580 71 ntBASIC3.8□□□□□ -1.8
Trim28Q62318 Gm26501-201ENSMUST00000178307 107 ntBASIC3.8□□□□□ -1.8
Trim28Q62318 Mir7081-201ENSMUST00000184490 75 ntBASIC3.8□□□□□ -1.8
Trim28Q62318 Gm27624-201ENSMUST00000185047 177 ntBASIC3.8□□□□□ -1.8
Trim28Q62318 Gm27505-201ENSMUST00000185071 110 ntBASIC3.8□□□□□ -1.8
Trim28Q62318 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC3.8□□□□□ -1.8
Trim28Q62318 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC3.8□□□□□ -1.8
Trim28Q62318 Gm19244-201ENSMUST00000204340 253 ntBASIC3.8□□□□□ -1.8
Trim28Q62318 Gm45403-201ENSMUST00000209453 276 ntBASIC3.8□□□□□ -1.8
Trim28Q62318 AC159709.1-201ENSMUST00000220445 349 ntBASIC3.8□□□□□ -1.8
Trim28Q62318 Gm16419-201ENSMUST00000221057 625 ntBASIC3.8□□□□□ -1.8
Trim28Q62318 CT954323.1-201ENSMUST00000222774 229 ntBASIC3.8□□□□□ -1.8
Trim28Q62318 Mir26a-1-201ENSMUST00000083579 90 ntBASIC3.8□□□□□ -1.8
Trim28Q62318 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC3.8□□□□□ -1.8
Trim28Q62318 Olfr1014-202ENSMUST00000213453 2447 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
Trim28Q62318 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Trim28Q62318 Gm43486-201ENSMUST00000196431 4339 ntBASIC3.79□□□□□ -1.8
Trim28Q62318 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Trim28Q62318 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Trim28Q62318 Gm37626-201ENSMUST00000194332 4563 ntBASIC3.79□□□□□ -1.8
Trim28Q62318 Gm14537-201ENSMUST00000117464 599 ntBASIC3.79□□□□□ -1.8
Trim28Q62318 Gm14971-201ENSMUST00000117980 663 ntBASIC3.79□□□□□ -1.8
Trim28Q62318 n-R5s80-201ENSMUST00000122596 111 ntBASIC3.79□□□□□ -1.8
Trim28Q62318 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC3.79□□□□□ -1.8
Trim28Q62318 Gm25624-201ENSMUST00000157222 275 ntBASIC3.79□□□□□ -1.8
Trim28Q62318 Gm22257-201ENSMUST00000158687 301 ntBASIC3.79□□□□□ -1.8
Trim28Q62318 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Trim28Q62318 Gm37007-201ENSMUST00000194234 319 ntBASIC3.79□□□□□ -1.8
Trim28Q62318 Gm34073-201ENSMUST00000195736 212 ntBASIC3.79□□□□□ -1.8
Trim28Q62318 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC3.79□□□□□ -1.8
Trim28Q62318 Gm43600-201ENSMUST00000202134 223 ntBASIC3.79□□□□□ -1.8
Trim28Q62318 Gm44720-201ENSMUST00000206076 260 ntBASIC3.79□□□□□ -1.8
Trim28Q62318 Gm43268-201ENSMUST00000201536 4055 ntBASIC3.79□□□□□ -1.8
Trim28Q62318 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
Trim28Q62318 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
Trim28Q62318 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC3.79□□□□□ -1.8
Trim28Q62318 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
Trim28Q62318 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
Trim28Q62318 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Trim28Q62318 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Trim28Q62318 Gm14868-201ENSMUST00000117840 216 ntBASIC3.78□□□□□ -1.8
Trim28Q62318 Gm15002-201ENSMUST00000118406 452 ntBASIC3.78□□□□□ -1.8
Trim28Q62318 Gm14940-201ENSMUST00000119309 495 ntBASIC3.78□□□□□ -1.8
Trim28Q62318 Gm5958-201ENSMUST00000147698 297 ntBASIC3.78□□□□□ -1.8
Trim28Q62318 Gm24997-201ENSMUST00000157910 105 ntBASIC3.78□□□□□ -1.8
Trim28Q62318 Gm25654-201ENSMUST00000158467 88 ntBASIC3.78□□□□□ -1.8
Trim28Q62318 Gm3370-201ENSMUST00000171785 500 ntBASIC3.78□□□□□ -1.8
Trim28Q62318 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC3.78□□□□□ -1.8
Trim28Q62318 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Trim28Q62318 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC3.78□□□□□ -1.8
Trim28Q62318 Gm26446-201ENSMUST00000082455 103 ntBASIC3.78□□□□□ -1.8
Trim28Q62318 Olfr346-202ENSMUST00000213258 4104 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Trim28Q62318 Olfr849-202ENSMUST00000217273 6140 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Trim28Q62318 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Trim28Q62318 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Trim28Q62318 Nlrp9c-202ENSMUST00000085944 3216 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Trim28Q62318 Gm24867-201ENSMUST00000104161 107 ntBASIC3.77□□□□□ -1.81
Trim28Q62318 Gm26018-201ENSMUST00000104406 128 ntBASIC3.77□□□□□ -1.81
Trim28Q62318 Gm26147-201ENSMUST00000104479 114 ntBASIC3.77□□□□□ -1.81
Trim28Q62318 Gm14877-201ENSMUST00000119803 478 ntBASIC3.77□□□□□ -1.81
Trim28Q62318 Gm11430-201ENSMUST00000121317 217 ntBASIC3.77□□□□□ -1.81
Trim28Q62318 Gm22145-201ENSMUST00000157396 148 ntBASIC3.77□□□□□ -1.81
Trim28Q62318 Gm16326-201ENSMUST00000162843 414 ntBASIC3.77□□□□□ -1.81
Trim28Q62318 Gm25528-201ENSMUST00000180264 132 ntBASIC3.77□□□□□ -1.81
Trim28Q62318 Gm28828-201ENSMUST00000186601 696 ntBASIC3.77□□□□□ -1.81
Trim28Q62318 Gm7837-201ENSMUST00000190873 412 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 150.7 ms