Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 Gm12797-201ENSMUST00000118645 273 ntBASIC5.18□□□□□ -1.58
Scaf1Q5U4C3 Gm6574-201ENSMUST00000120037 362 ntBASIC5.18□□□□□ -1.58
Scaf1Q5U4C3 Gm25390-201ENSMUST00000157341 103 ntBASIC5.18□□□□□ -1.58
Scaf1Q5U4C3 Gm22531-201ENSMUST00000158819 140 ntBASIC5.18□□□□□ -1.58
Scaf1Q5U4C3 Gm16326-201ENSMUST00000162843 414 ntBASIC5.18□□□□□ -1.58
Scaf1Q5U4C3 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC5.18□□□□□ -1.58
Scaf1Q5U4C3 Mir7676-1-201ENSMUST00000183491 62 ntBASIC5.18□□□□□ -1.58
Scaf1Q5U4C3 Mir7676-2-201ENSMUST00000183523 62 ntBASIC5.18□□□□□ -1.58
Scaf1Q5U4C3 Mir471-201ENSMUST00000093596 67 ntBASIC5.18□□□□□ -1.58
Scaf1Q5U4C3 Gm42482-201ENSMUST00000198904 1947 ntBASIC5.18□□□□□ -1.58
Scaf1Q5U4C3 Olfr1316-202ENSMUST00000213696 4184 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
Scaf1Q5U4C3 Vmn2r67-201ENSMUST00000168730 2556 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Scaf1Q5U4C3 AC152162.1-201ENSMUST00000225910 2917 ntBASIC5.18□□□□□ -1.58
Scaf1Q5U4C3 Gm21034-201ENSMUST00000207390 2608 ntBASIC5.18□□□□□ -1.58
Scaf1Q5U4C3 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Scaf1Q5U4C3 CAAA01194877.1-201ENSMUST00000213137 4233 ntBASIC5.17□□□□□ -1.58
Scaf1Q5U4C3 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Scaf1Q5U4C3 Gm24987-201ENSMUST00000104453 134 ntBASIC5.17□□□□□ -1.58
Scaf1Q5U4C3 Gm13167-201ENSMUST00000118554 578 ntBASIC5.17□□□□□ -1.58
Scaf1Q5U4C3 Gm14586-201ENSMUST00000119571 408 ntBASIC5.17□□□□□ -1.58
Scaf1Q5U4C3 Gm24716-201ENSMUST00000157524 104 ntBASIC5.17□□□□□ -1.58
Scaf1Q5U4C3 Gm25572-201ENSMUST00000157527 172 ntBASIC5.17□□□□□ -1.58
Scaf1Q5U4C3 Fam107b-206ENSMUST00000176254 300 ntTSL 5 BASIC5.17□□□□□ -1.58
Scaf1Q5U4C3 AC115291.2-201ENSMUST00000228335 437 ntBASIC5.17□□□□□ -1.58
Scaf1Q5U4C3 Gm24626-201ENSMUST00000082621 161 ntBASIC5.17□□□□□ -1.58
Scaf1Q5U4C3 Gm22744-201ENSMUST00000083444 65 ntBASIC5.17□□□□□ -1.58
Scaf1Q5U4C3 Olfr1448-202ENSMUST00000213177 3979 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Scaf1Q5U4C3 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Scaf1Q5U4C3 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Scaf1Q5U4C3 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Scaf1Q5U4C3 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Scaf1Q5U4C3 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
Scaf1Q5U4C3 Gm37788-201ENSMUST00000193958 2705 ntBASIC5.16□□□□□ -1.58
Scaf1Q5U4C3 9530051G07Rik-201ENSMUST00000127673 4414 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Scaf1Q5U4C3 Olfr59-204ENSMUST00000214048 3363 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
Scaf1Q5U4C3 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
Scaf1Q5U4C3 Gm25765-201ENSMUST00000104100 132 ntBASIC5.16□□□□□ -1.58
Scaf1Q5U4C3 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC5.16□□□□□ -1.58
Scaf1Q5U4C3 Tarbp2-207ENSMUST00000142114 420 ntTSL 5 BASIC5.16□□□□□ -1.58
Scaf1Q5U4C3 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC5.16□□□□□ -1.58
Scaf1Q5U4C3 Gm25428-201ENSMUST00000157608 114 ntBASIC5.16□□□□□ -1.58
Scaf1Q5U4C3 Gm23559-201ENSMUST00000157824 103 ntBASIC5.16□□□□□ -1.58
Scaf1Q5U4C3 Gm24601-201ENSMUST00000157970 143 ntBASIC5.16□□□□□ -1.58
Scaf1Q5U4C3 Gm25834-201ENSMUST00000158916 101 ntBASIC5.16□□□□□ -1.58
Scaf1Q5U4C3 Gm28924-201ENSMUST00000190012 241 ntBASIC5.16□□□□□ -1.58
Scaf1Q5U4C3 Rhoay-ps1-201ENSMUST00000191243 581 ntBASIC5.16□□□□□ -1.58
Scaf1Q5U4C3 n-TSaga9-201ENSMUST00000197675 107 ntBASIC5.16□□□□□ -1.58
Scaf1Q5U4C3 AC124400.1-201ENSMUST00000225779 193 ntBASIC5.16□□□□□ -1.58
Scaf1Q5U4C3 Snord15a-201ENSMUST00000083888 148 ntBASIC5.16□□□□□ -1.58
Scaf1Q5U4C3 Gm24164-201ENSMUST00000093663 104 ntBASIC5.16□□□□□ -1.58
Scaf1Q5U4C3 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Scaf1Q5U4C3 Vmn2r19-201ENSMUST00000073948 2565 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Scaf1Q5U4C3 Btbd35f10-201ENSMUST00000178621 1952 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Scaf1Q5U4C3 Cacnb4-202ENSMUST00000102760 7872 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Scaf1Q5U4C3 Gm14922-201ENSMUST00000121131 163 ntBASIC5.15□□□□□ -1.59
Scaf1Q5U4C3 Gm22215-201ENSMUST00000157558 96 ntBASIC5.15□□□□□ -1.59
Scaf1Q5U4C3 Gm27928-201ENSMUST00000183747 256 ntBASIC5.15□□□□□ -1.59
Scaf1Q5U4C3 Igkv13-76-201ENSMUST00000197621 347 ntBASIC5.15□□□□□ -1.59
Scaf1Q5U4C3 Igkv8-31-201ENSMUST00000200040 372 ntBASIC5.15□□□□□ -1.59
Scaf1Q5U4C3 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC5.15□□□□□ -1.59
Scaf1Q5U4C3 AC161054.1-201ENSMUST00000214319 184 ntBASIC5.15□□□□□ -1.59
Scaf1Q5U4C3 AC153361.1-201ENSMUST00000219679 247 ntBASIC5.15□□□□□ -1.59
Scaf1Q5U4C3 Gm24966-201ENSMUST00000082443 79 ntBASIC5.15□□□□□ -1.59
Scaf1Q5U4C3 Gm23736-201ENSMUST00000082553 75 ntBASIC5.15□□□□□ -1.59
Scaf1Q5U4C3 Xirp2-201ENSMUST00000028410 11955 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Scaf1Q5U4C3 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Scaf1Q5U4C3 Cfh-203ENSMUST00000111977 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
Scaf1Q5U4C3 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Scaf1Q5U4C3 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
Scaf1Q5U4C3 n-R5s68-201ENSMUST00000122639 82 ntBASIC5.14□□□□□ -1.59
Scaf1Q5U4C3 Gm42774-201ENSMUST00000198854 283 ntBASIC5.14□□□□□ -1.59
Scaf1Q5U4C3 AC167669.4-201ENSMUST00000225967 140 ntBASIC5.14□□□□□ -1.59
Scaf1Q5U4C3 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Scaf1Q5U4C3 Gm25581-201ENSMUST00000083410 164 ntBASIC5.14□□□□□ -1.59
Scaf1Q5U4C3 Gm45461-201ENSMUST00000211726 4535 ntBASIC5.14□□□□□ -1.59
Scaf1Q5U4C3 Xirp2-202ENSMUST00000112347 11979 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Scaf1Q5U4C3 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Scaf1Q5U4C3 Fgd4-206ENSMUST00000161861 8342 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Scaf1Q5U4C3 Olfr1369-ps1-203ENSMUST00000213922 3930 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Scaf1Q5U4C3 Olfr476-202ENSMUST00000217173 2539 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Scaf1Q5U4C3 Olfr986-203ENSMUST00000216720 3381 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Scaf1Q5U4C3 Vmn1r169-203ENSMUST00000227547 2322 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Scaf1Q5U4C3 Gm9911-201ENSMUST00000211467 2802 ntBASIC5.13□□□□□ -1.59
Scaf1Q5U4C3 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Scaf1Q5U4C3 Gm11704-201ENSMUST00000120031 214 ntBASIC5.13□□□□□ -1.59
Scaf1Q5U4C3 Gm12276-201ENSMUST00000121709 301 ntBASIC5.13□□□□□ -1.59
Scaf1Q5U4C3 Gm11204-201ENSMUST00000122438 147 ntBASIC5.13□□□□□ -1.59
Scaf1Q5U4C3 Gm25783-201ENSMUST00000122525 190 ntBASIC5.13□□□□□ -1.59
Scaf1Q5U4C3 Gm15949-201ENSMUST00000129485 126 ntTSL 3 BASIC5.13□□□□□ -1.59
Scaf1Q5U4C3 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC5.13□□□□□ -1.59
Scaf1Q5U4C3 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Scaf1Q5U4C3 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC5.13□□□□□ -1.59
Scaf1Q5U4C3 Gm29167-201ENSMUST00000190024 377 ntBASIC5.13□□□□□ -1.59
Scaf1Q5U4C3 Gm37290-201ENSMUST00000195775 339 ntBASIC5.13□□□□□ -1.59
Scaf1Q5U4C3 Gm45245-201ENSMUST00000210082 376 ntBASIC5.13□□□□□ -1.59
Scaf1Q5U4C3 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
Scaf1Q5U4C3 Hfm1-202ENSMUST00000117588 4870 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Scaf1Q5U4C3 Olfr1454-204ENSMUST00000217568 4215 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Scaf1Q5U4C3 Dnah3-201ENSMUST00000046993 12252 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
Scaf1Q5U4C3 Olfr887-202ENSMUST00000212502 6281 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 109 ms