Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 Gm28920-201ENSMUST00000189957 699 ntBASIC3.84□□□□□ -1.79
Rnf180Q3U827 Gm44157-201ENSMUST00000204720 410 ntBASIC3.84□□□□□ -1.79
Rnf180Q3U827 Gm35405-201ENSMUST00000218754 400 ntBASIC3.84□□□□□ -1.79
Rnf180Q3U827 Gm7422-201ENSMUST00000220115 640 ntBASIC3.84□□□□□ -1.79
Rnf180Q3U827 Snora23-201ENSMUST00000082517 184 ntBASIC3.84□□□□□ -1.79
Rnf180Q3U827 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Rnf180Q3U827 Gm43663-201ENSMUST00000198643 1505 ntBASIC3.84□□□□□ -1.8
Rnf180Q3U827 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC3.84□□□□□ -1.8
Rnf180Q3U827 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.8
Rnf180Q3U827 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC3.84□□□□□ -1.8
Rnf180Q3U827 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC3.83□□□□□ -1.8
Rnf180Q3U827 Gm42684-201ENSMUST00000197663 3615 ntBASIC3.83□□□□□ -1.8
Rnf180Q3U827 Uty-205ENSMUST00000143286 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
Rnf180Q3U827 Olfr1309-203ENSMUST00000214935 5448 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Rnf180Q3U827 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Rnf180Q3U827 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Rnf180Q3U827 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC3.83□□□□□ -1.8
Rnf180Q3U827 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC3.83□□□□□ -1.8
Rnf180Q3U827 Gm12647-201ENSMUST00000118977 265 ntBASIC3.83□□□□□ -1.8
Rnf180Q3U827 Gm11794-201ENSMUST00000119446 237 ntBASIC3.83□□□□□ -1.8
Rnf180Q3U827 Gm14402-201ENSMUST00000122217 508 ntBASIC3.83□□□□□ -1.8
Rnf180Q3U827 Gm24959-201ENSMUST00000157924 146 ntBASIC3.83□□□□□ -1.8
Rnf180Q3U827 Gm22532-201ENSMUST00000158822 140 ntBASIC3.83□□□□□ -1.8
Rnf180Q3U827 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC3.83□□□□□ -1.8
Rnf180Q3U827 Gm27402-201ENSMUST00000183890 120 ntBASIC3.83□□□□□ -1.8
Rnf180Q3U827 Gm43402-201ENSMUST00000197159 159 ntBASIC3.83□□□□□ -1.8
Rnf180Q3U827 Gm43746-201ENSMUST00000200028 317 ntBASIC3.83□□□□□ -1.8
Rnf180Q3U827 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC3.83□□□□□ -1.8
Rnf180Q3U827 AC154271.1-201ENSMUST00000224780 383 ntBASIC3.83□□□□□ -1.8
Rnf180Q3U827 AC164304.1-201ENSMUST00000226920 272 ntBASIC3.83□□□□□ -1.8
Rnf180Q3U827 AC157572.3-201ENSMUST00000227288 303 ntBASIC3.83□□□□□ -1.8
Rnf180Q3U827 Gm23845-201ENSMUST00000083834 152 ntBASIC3.83□□□□□ -1.8
Rnf180Q3U827 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC3.83□□□□□ -1.8
Rnf180Q3U827 Vmn1r81-205ENSMUST00000228764 13763 ntAPPRIS P2 BASIC3.83□□□□□ -1.8
Rnf180Q3U827 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Rnf180Q3U827 AC153522.2-201ENSMUST00000218389 3853 ntBASIC3.82□□□□□ -1.8
Rnf180Q3U827 Gm36989-201ENSMUST00000193225 2160 ntBASIC3.82□□□□□ -1.8
Rnf180Q3U827 Pde1a-206ENSMUST00000102655 4258 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Rnf180Q3U827 Gm25529-201ENSMUST00000104850 92 ntBASIC3.82□□□□□ -1.8
Rnf180Q3U827 Gm14714-201ENSMUST00000119743 439 ntBASIC3.82□□□□□ -1.8
Rnf180Q3U827 Gm13692-201ENSMUST00000120774 371 ntBASIC3.82□□□□□ -1.8
Rnf180Q3U827 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC3.82□□□□□ -1.8
Rnf180Q3U827 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Rnf180Q3U827 Gm20651-201ENSMUST00000177219 329 ntBASIC3.82□□□□□ -1.8
Rnf180Q3U827 Mir6386-201ENSMUST00000183558 104 ntBASIC3.82□□□□□ -1.8
Rnf180Q3U827 Gm29147-201ENSMUST00000186846 315 ntBASIC3.82□□□□□ -1.8
Rnf180Q3U827 Gm29227-201ENSMUST00000187139 315 ntBASIC3.82□□□□□ -1.8
Rnf180Q3U827 Gm29034-201ENSMUST00000188099 315 ntBASIC3.82□□□□□ -1.8
Rnf180Q3U827 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Rnf180Q3U827 Gm28155-201ENSMUST00000191066 151 ntBASIC3.82□□□□□ -1.8
Rnf180Q3U827 Gm28160-201ENSMUST00000191229 315 ntBASIC3.82□□□□□ -1.8
Rnf180Q3U827 Gm37129-201ENSMUST00000195791 315 ntBASIC3.82□□□□□ -1.8
Rnf180Q3U827 LOC667541-201ENSMUST00000223408 278 ntBASIC3.82□□□□□ -1.8
Rnf180Q3U827 Gm24948-201ENSMUST00000082866 207 ntBASIC3.82□□□□□ -1.8
Rnf180Q3U827 Gm23042-201ENSMUST00000083866 101 ntBASIC3.82□□□□□ -1.8
Rnf180Q3U827 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Rnf180Q3U827 Olfr1183-203ENSMUST00000219871 8353 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Rnf180Q3U827 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Rnf180Q3U827 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Rnf180Q3U827 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
Rnf180Q3U827 Arhgap5-202ENSMUST00000217820 2332 ntTSL 5 BASIC3.81□□□□□ -1.8
Rnf180Q3U827 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Rnf180Q3U827 Olfr145-202ENSMUST00000213688 6691 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Rnf180Q3U827 4932429P05Rik-201ENSMUST00000113958 3093 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Rnf180Q3U827 Gm13650-201ENSMUST00000117729 433 ntBASIC3.81□□□□□ -1.8
Rnf180Q3U827 Gm14810-201ENSMUST00000121628 486 ntBASIC3.81□□□□□ -1.8
Rnf180Q3U827 Gm23759-201ENSMUST00000158351 268 ntBASIC3.81□□□□□ -1.8
Rnf180Q3U827 Gm24885-201ENSMUST00000158783 270 ntBASIC3.81□□□□□ -1.8
Rnf180Q3U827 Gm25643-201ENSMUST00000158874 103 ntBASIC3.81□□□□□ -1.8
Rnf180Q3U827 Gm22114-201ENSMUST00000177756 107 ntBASIC3.81□□□□□ -1.8
Rnf180Q3U827 Gm25121-201ENSMUST00000179846 79 ntBASIC3.81□□□□□ -1.8
Rnf180Q3U827 Gm37290-201ENSMUST00000195775 339 ntBASIC3.81□□□□□ -1.8
Rnf180Q3U827 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC3.81□□□□□ -1.8
Rnf180Q3U827 AC126267.1-201ENSMUST00000214282 284 ntBASIC3.81□□□□□ -1.8
Rnf180Q3U827 AC168266.1-201ENSMUST00000216024 226 ntBASIC3.81□□□□□ -1.8
Rnf180Q3U827 AC158622.1-201ENSMUST00000217107 230 ntBASIC3.81□□□□□ -1.8
Rnf180Q3U827 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Rnf180Q3U827 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC3.81□□□□□ -1.8
Rnf180Q3U827 AC159188.1-201ENSMUST00000225198 526 ntBASIC3.81□□□□□ -1.8
Rnf180Q3U827 Gm22507-201ENSMUST00000082773 160 ntBASIC3.81□□□□□ -1.8
Rnf180Q3U827 Rny1-201ENSMUST00000083767 112 ntBASIC3.81□□□□□ -1.8
Rnf180Q3U827 n-R5s182-201ENSMUST00000083889 107 ntBASIC3.81□□□□□ -1.8
Rnf180Q3U827 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Rnf180Q3U827 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Rnf180Q3U827 Gm44150-201ENSMUST00000203317 2619 ntBASIC3.81□□□□□ -1.8
Rnf180Q3U827 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
Rnf180Q3U827 Gm37296-201ENSMUST00000192728 2922 ntBASIC3.81□□□□□ -1.8
Rnf180Q3U827 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC3.8□□□□□ -1.8
Rnf180Q3U827 Olfr1325-202ENSMUST00000216007 3617 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
Rnf180Q3U827 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Rnf180Q3U827 Gm24274-201ENSMUST00000116787 124 ntBASIC3.8□□□□□ -1.8
Rnf180Q3U827 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC3.8□□□□□ -1.8
Rnf180Q3U827 Gm13541-201ENSMUST00000119519 283 ntBASIC3.8□□□□□ -1.8
Rnf180Q3U827 Gm13588-201ENSMUST00000120026 135 ntBASIC3.8□□□□□ -1.8
Rnf180Q3U827 Gm12956-201ENSMUST00000122184 414 ntBASIC3.8□□□□□ -1.8
Rnf180Q3U827 Gm26275-201ENSMUST00000157101 268 ntBASIC3.8□□□□□ -1.8
Rnf180Q3U827 Gm23230-201ENSMUST00000157298 133 ntBASIC3.8□□□□□ -1.8
Rnf180Q3U827 Gm24501-201ENSMUST00000158452 62 ntBASIC3.8□□□□□ -1.8
Rnf180Q3U827 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Rnf180Q3U827 Gm22621-201ENSMUST00000179678 74 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 144.6 ms