Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
Sdc1P18828 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC1.6□□□□□ -2.15
Sdc1P18828 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC1.6□□□□□ -2.15
Sdc1P18828 Gm12806-201ENSMUST00000119384 268 ntBASIC1.6□□□□□ -2.15
Sdc1P18828 n-R5s164-201ENSMUST00000122664 112 ntBASIC1.6□□□□□ -2.15
Sdc1P18828 Gm16218-201ENSMUST00000155424 388 ntBASIC1.6□□□□□ -2.15
Sdc1P18828 U6.1-201ENSMUST00000157443 101 ntBASIC1.6□□□□□ -2.15
Sdc1P18828 Gm23124-201ENSMUST00000157650 107 ntBASIC1.6□□□□□ -2.15
Sdc1P18828 Gm22843-201ENSMUST00000157710 134 ntBASIC1.6□□□□□ -2.15
Sdc1P18828 Gm25051-201ENSMUST00000158602 249 ntBASIC1.6□□□□□ -2.15
Sdc1P18828 Gm22257-201ENSMUST00000158687 301 ntBASIC1.6□□□□□ -2.15
Sdc1P18828 Gm19932-201ENSMUST00000177033 313 ntBASIC1.6□□□□□ -2.15
Sdc1P18828 Mir496b-201ENSMUST00000184935 113 ntBASIC1.6□□□□□ -2.15
Sdc1P18828 Gm27979-201ENSMUST00000185126 56 ntBASIC1.6□□□□□ -2.15
Sdc1P18828 Gm37377-201ENSMUST00000191733 304 ntBASIC1.6□□□□□ -2.15
Sdc1P18828 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC1.6□□□□□ -2.15
Sdc1P18828 Gm43676-201ENSMUST00000197532 540 ntBASIC1.6□□□□□ -2.15
Sdc1P18828 Gm44870-201ENSMUST00000207291 357 ntBASIC1.6□□□□□ -2.15
Sdc1P18828 Olfr752-ps1-201ENSMUST00000208736 1141 ntBASIC1.6□□□□□ -2.15
Sdc1P18828 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC1.6□□□□□ -2.15
Sdc1P18828 Gm39231-201ENSMUST00000209813 501 ntTSL 5 BASIC1.6□□□□□ -2.15
Sdc1P18828 AC158622.1-201ENSMUST00000217107 230 ntBASIC1.6□□□□□ -2.15
Sdc1P18828 AC027184.1-201ENSMUST00000226991 424 ntBASIC1.6□□□□□ -2.15
Sdc1P18828 Olfr235-201ENSMUST00000073507 1079 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
Sdc1P18828 Olfr987-203ENSMUST00000216347 1453 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
Sdc1P18828 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
Sdc1P18828 AC154386.1-201ENSMUST00000222753 2871 ntBASIC1.6□□□□□ -2.15
Sdc1P18828 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
Sdc1P18828 Gm43032-201ENSMUST00000197967 3123 ntBASIC1.59□□□□□ -2.15
Sdc1P18828 Gm22674-201ENSMUST00000104413 131 ntBASIC1.59□□□□□ -2.15
Sdc1P18828 Gm16021-201ENSMUST00000121176 219 ntBASIC1.59□□□□□ -2.15
Sdc1P18828 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC1.59□□□□□ -2.15
Sdc1P18828 Gm7953-201ENSMUST00000168278 469 ntBASIC1.59□□□□□ -2.15
Sdc1P18828 Gm17542-201ENSMUST00000169859 99 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
Sdc1P18828 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC1.59□□□□□ -2.15
Sdc1P18828 Gm27511-201ENSMUST00000183502 127 ntBASIC1.59□□□□□ -2.15
Sdc1P18828 Mir7k-201ENSMUST00000184115 110 ntBASIC1.59□□□□□ -2.15
Sdc1P18828 Gm18971-201ENSMUST00000197240 374 ntBASIC1.59□□□□□ -2.15
Sdc1P18828 Gm32222-201ENSMUST00000203296 298 ntBASIC1.59□□□□□ -2.15
Sdc1P18828 Gm44128-201ENSMUST00000204909 219 ntBASIC1.59□□□□□ -2.15
Sdc1P18828 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC1.59□□□□□ -2.15
Sdc1P18828 AC160030.1-201ENSMUST00000218916 506 ntTSL 2 BASIC1.59□□□□□ -2.15
Sdc1P18828 AC157017.1-201ENSMUST00000220148 364 ntBASIC1.59□□□□□ -2.15
Sdc1P18828 AC124569.4-201ENSMUST00000223830 1220 ntBASIC1.59□□□□□ -2.15
Sdc1P18828 Stfa2l1-201ENSMUST00000079184 414 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
Sdc1P18828 Gm26175-201ENSMUST00000083794 131 ntBASIC1.59□□□□□ -2.15
Sdc1P18828 Gm36944-201ENSMUST00000192257 2759 ntBASIC1.59□□□□□ -2.15
Sdc1P18828 Gm23747-201ENSMUST00000104228 131 ntBASIC1.58□□□□□ -2.16
Sdc1P18828 Gm23175-201ENSMUST00000104371 132 ntBASIC1.58□□□□□ -2.16
Sdc1P18828 Gm26247-201ENSMUST00000116702 91 ntBASIC1.58□□□□□ -2.16
Sdc1P18828 Gm14785-201ENSMUST00000120185 539 ntBASIC1.58□□□□□ -2.16
Sdc1P18828 Gm24627-201ENSMUST00000122764 138 ntBASIC1.58□□□□□ -2.16
Sdc1P18828 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC1.58□□□□□ -2.16
Sdc1P18828 Gm22534-201ENSMUST00000158173 104 ntBASIC1.58□□□□□ -2.16
Sdc1P18828 Mir28b-201ENSMUST00000175399 80 ntBASIC1.58□□□□□ -2.16
Sdc1P18828 Gm24656-201ENSMUST00000177548 132 ntBASIC1.58□□□□□ -2.16
Sdc1P18828 Gm21827-201ENSMUST00000178247 423 ntBASIC1.58□□□□□ -2.16
Sdc1P18828 Gm9892-201ENSMUST00000182415 992 ntBASIC1.58□□□□□ -2.16
Sdc1P18828 Gm28282-201ENSMUST00000186072 186 ntBASIC1.58□□□□□ -2.16
Sdc1P18828 Gm37778-201ENSMUST00000191732 190 ntBASIC1.58□□□□□ -2.16
Sdc1P18828 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC1.58□□□□□ -2.16
Sdc1P18828 Gm44666-201ENSMUST00000208544 391 ntBASIC1.58□□□□□ -2.16
Sdc1P18828 AC165293.1-201ENSMUST00000219669 329 ntBASIC1.58□□□□□ -2.16
Sdc1P18828 AC166830.2-201ENSMUST00000225821 196 ntBASIC1.58□□□□□ -2.16
Sdc1P18828 Mir222-201ENSMUST00000083537 79 ntBASIC1.58□□□□□ -2.16
Sdc1P18828 Gm37096-201ENSMUST00000192317 2058 ntBASIC1.58□□□□□ -2.16
Sdc1P18828 Gm38388-201ENSMUST00000195569 1430 ntBASIC1.57□□□□□ -2.16
Sdc1P18828 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
Sdc1P18828 Gm23472-201ENSMUST00000101806 191 ntBASIC1.57□□□□□ -2.16
Sdc1P18828 Gm14624-201ENSMUST00000117746 192 ntBASIC1.57□□□□□ -2.16
Sdc1P18828 Gm12053-201ENSMUST00000119022 252 ntBASIC1.57□□□□□ -2.16
Sdc1P18828 Gm11363-201ENSMUST00000121672 548 ntBASIC1.57□□□□□ -2.16
Sdc1P18828 Gm23000-201ENSMUST00000157083 139 ntBASIC1.57□□□□□ -2.16
Sdc1P18828 Gm23172-201ENSMUST00000157160 124 ntBASIC1.57□□□□□ -2.16
Sdc1P18828 Gm23331-201ENSMUST00000157423 108 ntBASIC1.57□□□□□ -2.16
Sdc1P18828 Gm22727-201ENSMUST00000158090 116 ntBASIC1.57□□□□□ -2.16
Sdc1P18828 Gm22538-201ENSMUST00000158169 299 ntBASIC1.57□□□□□ -2.16
Sdc1P18828 Gm7925-201ENSMUST00000166690 401 ntBASIC1.57□□□□□ -2.16
Sdc1P18828 Gm24497-201ENSMUST00000177868 191 ntBASIC1.57□□□□□ -2.16
Sdc1P18828 Gm25939-201ENSMUST00000179876 191 ntBASIC1.57□□□□□ -2.16
Sdc1P18828 Esp24-201ENSMUST00000180245 207 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
Sdc1P18828 Gm7837-201ENSMUST00000190873 412 ntBASIC1.57□□□□□ -2.16
Sdc1P18828 Gm43556-201ENSMUST00000196186 681 ntBASIC1.57□□□□□ -2.16
Sdc1P18828 Gm9402-201ENSMUST00000196849 388 ntBASIC1.57□□□□□ -2.16
Sdc1P18828 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
Sdc1P18828 Olfr499-ps1-201ENSMUST00000208811 930 ntBASIC1.57□□□□□ -2.16
Sdc1P18828 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.57□□□□□ -2.16
Sdc1P18828 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC1.57□□□□□ -2.16
Sdc1P18828 AC102352.1-201ENSMUST00000224187 582 ntBASIC1.57□□□□□ -2.16
Sdc1P18828 Gm23444-201ENSMUST00000082922 191 ntBASIC1.57□□□□□ -2.16
Sdc1P18828 Gm23462-201ENSMUST00000083264 104 ntBASIC1.57□□□□□ -2.16
Sdc1P18828 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
Sdc1P18828 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
Sdc1P18828 Mir344c-201ENSMUST00000103919 92 ntBASIC1.56□□□□□ -2.16
Sdc1P18828 Gm15266-201ENSMUST00000119635 255 ntBASIC1.56□□□□□ -2.16
Sdc1P18828 Gm14362-201ENSMUST00000121679 273 ntBASIC1.56□□□□□ -2.16
Sdc1P18828 Gm12670-201ENSMUST00000123606 576 ntTSL 2 BASIC1.56□□□□□ -2.16
Sdc1P18828 Gm15254-201ENSMUST00000149567 273 ntBASIC1.56□□□□□ -2.16
Sdc1P18828 Gm22338-201ENSMUST00000157715 129 ntBASIC1.56□□□□□ -2.16
Sdc1P18828 Gm24691-201ENSMUST00000157762 140 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 119.8 ms