Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm22590-201ENSMUST00000104247 128 ntBASIC4.16□□□□□ -1.74
Clp1Q99LI9 Gm23886-201ENSMUST00000122684 313 ntBASIC4.16□□□□□ -1.74
Clp1Q99LI9 Gm23391-201ENSMUST00000157579 104 ntBASIC4.16□□□□□ -1.74
Clp1Q99LI9 Gm23559-201ENSMUST00000157824 103 ntBASIC4.16□□□□□ -1.74
Clp1Q99LI9 Gm24056-201ENSMUST00000158617 146 ntBASIC4.16□□□□□ -1.74
Clp1Q99LI9 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Clp1Q99LI9 Gm22348-201ENSMUST00000178674 79 ntBASIC4.16□□□□□ -1.74
Clp1Q99LI9 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC4.16□□□□□ -1.74
Clp1Q99LI9 Gm44429-201ENSMUST00000203542 186 ntBASIC4.16□□□□□ -1.74
Clp1Q99LI9 Gm45907-201ENSMUST00000213023 193 ntBASIC4.16□□□□□ -1.74
Clp1Q99LI9 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC4.16□□□□□ -1.74
Clp1Q99LI9 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
Clp1Q99LI9 Olfr1404-203ENSMUST00000217374 3686 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Clp1Q99LI9 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC4.16□□□□□ -1.74
Clp1Q99LI9 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Clp1Q99LI9 B230334C09Rik-201ENSMUST00000200255 8927 ntBASIC4.16□□□□□ -1.74
Clp1Q99LI9 Olfr1325-203ENSMUST00000216108 3535 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
Clp1Q99LI9 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
Clp1Q99LI9 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
Clp1Q99LI9 Olfr1269-203ENSMUST00000216493 3827 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
Clp1Q99LI9 Vmn1r66-205ENSMUST00000228622 3304 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
Clp1Q99LI9 Gm23472-201ENSMUST00000101806 191 ntBASIC4.15□□□□□ -1.75
Clp1Q99LI9 Gm23256-201ENSMUST00000102235 110 ntBASIC4.15□□□□□ -1.75
Clp1Q99LI9 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Clp1Q99LI9 Gm26140-201ENSMUST00000103807 110 ntBASIC4.15□□□□□ -1.75
Clp1Q99LI9 Gm9119-201ENSMUST00000118866 495 ntBASIC4.15□□□□□ -1.75
Clp1Q99LI9 Gm23667-201ENSMUST00000157466 120 ntBASIC4.15□□□□□ -1.75
Clp1Q99LI9 Gm22380-201ENSMUST00000157479 95 ntBASIC4.15□□□□□ -1.75
Clp1Q99LI9 Mir1934-201ENSMUST00000158127 83 ntBASIC4.15□□□□□ -1.75
Clp1Q99LI9 Gm24675-201ENSMUST00000158757 259 ntBASIC4.15□□□□□ -1.75
Clp1Q99LI9 Gm17052-201ENSMUST00000165496 289 ntBASIC4.15□□□□□ -1.75
Clp1Q99LI9 Gm22908-201ENSMUST00000177620 110 ntBASIC4.15□□□□□ -1.75
Clp1Q99LI9 Gm24497-201ENSMUST00000177868 191 ntBASIC4.15□□□□□ -1.75
Clp1Q99LI9 Gm8197-201ENSMUST00000192906 363 ntTSL 5 BASIC4.15□□□□□ -1.75
Clp1Q99LI9 Gm17966-201ENSMUST00000193453 594 ntBASIC4.15□□□□□ -1.75
Clp1Q99LI9 Igkv11-118-201ENSMUST00000199448 346 ntBASIC4.15□□□□□ -1.75
Clp1Q99LI9 Gm45002-201ENSMUST00000208045 120 ntBASIC4.15□□□□□ -1.75
Clp1Q99LI9 AC154374.1-201ENSMUST00000215351 351 ntBASIC4.15□□□□□ -1.75
Clp1Q99LI9 CT030159.4-201ENSMUST00000221966 395 ntBASIC4.15□□□□□ -1.75
Clp1Q99LI9 Gm24966-201ENSMUST00000082443 79 ntBASIC4.15□□□□□ -1.75
Clp1Q99LI9 Gm22245-201ENSMUST00000082479 103 ntBASIC4.15□□□□□ -1.75
Clp1Q99LI9 Gm23444-201ENSMUST00000082922 191 ntBASIC4.15□□□□□ -1.75
Clp1Q99LI9 Gm24204-201ENSMUST00000082950 107 ntBASIC4.15□□□□□ -1.75
Clp1Q99LI9 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
Clp1Q99LI9 Olfr437-202ENSMUST00000205175 2952 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
Clp1Q99LI9 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
Clp1Q99LI9 A630033H20Rik-206ENSMUST00000180182 2997 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
Clp1Q99LI9 Olfr1130-202ENSMUST00000216580 2648 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Clp1Q99LI9 Gm43881-201ENSMUST00000203051 2530 ntBASIC4.14□□□□□ -1.75
Clp1Q99LI9 Gm37777-201ENSMUST00000195546 3366 ntBASIC4.14□□□□□ -1.75
Clp1Q99LI9 Gm23013-201ENSMUST00000104146 106 ntBASIC4.14□□□□□ -1.75
Clp1Q99LI9 Gm281-201ENSMUST00000144914 2952 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Clp1Q99LI9 Gm24716-201ENSMUST00000157524 104 ntBASIC4.14□□□□□ -1.75
Clp1Q99LI9 Gm17103-201ENSMUST00000168897 549 ntTSL 3 BASIC4.14□□□□□ -1.75
Clp1Q99LI9 Rhoay-ps3-201ENSMUST00000187648 576 ntBASIC4.14□□□□□ -1.75
Clp1Q99LI9 Gm29167-201ENSMUST00000190024 377 ntBASIC4.14□□□□□ -1.75
Clp1Q99LI9 Gm44824-201ENSMUST00000207021 229 ntBASIC4.14□□□□□ -1.75
Clp1Q99LI9 AC121942.2-201ENSMUST00000223824 600 ntBASIC4.14□□□□□ -1.75
Clp1Q99LI9 AC108416.2-201ENSMUST00000226792 367 ntBASIC4.14□□□□□ -1.75
Clp1Q99LI9 Snord82-201ENSMUST00000082889 70 ntBASIC4.14□□□□□ -1.75
Clp1Q99LI9 Mir30e-201ENSMUST00000083475 92 ntBASIC4.14□□□□□ -1.75
Clp1Q99LI9 Gm37061-201ENSMUST00000195066 3243 ntBASIC4.14□□□□□ -1.75
Clp1Q99LI9 Btbd35f10-201ENSMUST00000178621 1952 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Clp1Q99LI9 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Clp1Q99LI9 Ptprz1-201ENSMUST00000090568 8068 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
Clp1Q99LI9 Ndst4-204ENSMUST00000173932 7417 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Clp1Q99LI9 AC156560.3-201ENSMUST00000222978 3841 ntBASIC4.14□□□□□ -1.75
Clp1Q99LI9 Olfr735-202ENSMUST00000216634 3860 ntAPPRIS ALT2 TSL 3 BASIC4.13□□□□□ -1.75
Clp1Q99LI9 Gm38207-201ENSMUST00000193009 3505 ntBASIC4.13□□□□□ -1.75
Clp1Q99LI9 Trdv5-201ENSMUST00000103685 438 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Clp1Q99LI9 Mir3058-201ENSMUST00000175126 91 ntBASIC4.13□□□□□ -1.75
Clp1Q99LI9 Gm37617-201ENSMUST00000194309 159 ntBASIC4.13□□□□□ -1.75
Clp1Q99LI9 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC4.13□□□□□ -1.75
Clp1Q99LI9 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC4.13□□□□□ -1.75
Clp1Q99LI9 AC157476.1-201ENSMUST00000215555 169 ntBASIC4.13□□□□□ -1.75
Clp1Q99LI9 AC155923.1-201ENSMUST00000215676 356 ntBASIC4.13□□□□□ -1.75
Clp1Q99LI9 AC158982.2-201ENSMUST00000226283 184 ntBASIC4.13□□□□□ -1.75
Clp1Q99LI9 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Clp1Q99LI9 Gm22739-201ENSMUST00000083437 160 ntBASIC4.13□□□□□ -1.75
Clp1Q99LI9 Gm26696-201ENSMUST00000181941 2848 ntBASIC4.13□□□□□ -1.75
Clp1Q99LI9 Gm45176-201ENSMUST00000207696 4096 ntBASIC4.13□□□□□ -1.75
Clp1Q99LI9 Cep295-208ENSMUST00000161132 7605 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
Clp1Q99LI9 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Clp1Q99LI9 Cubn-201ENSMUST00000091436 11262 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Clp1Q99LI9 Gm23063-201ENSMUST00000102350 93 ntBASIC4.12□□□□□ -1.75
Clp1Q99LI9 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Clp1Q99LI9 Gm25421-201ENSMUST00000104218 164 ntBASIC4.12□□□□□ -1.75
Clp1Q99LI9 Gm26027-201ENSMUST00000122725 268 ntBASIC4.12□□□□□ -1.75
Clp1Q99LI9 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC4.12□□□□□ -1.75
Clp1Q99LI9 Gm23589-201ENSMUST00000157660 105 ntBASIC4.12□□□□□ -1.75
Clp1Q99LI9 Gm24014-201ENSMUST00000157728 157 ntBASIC4.12□□□□□ -1.75
Clp1Q99LI9 Gm24601-201ENSMUST00000157970 143 ntBASIC4.12□□□□□ -1.75
Clp1Q99LI9 Ptma-ps1-201ENSMUST00000181079 309 ntBASIC4.12□□□□□ -1.75
Clp1Q99LI9 Gm27476-201ENSMUST00000183366 104 ntBASIC4.12□□□□□ -1.75
Clp1Q99LI9 Gm27921-201ENSMUST00000183968 108 ntBASIC4.12□□□□□ -1.75
Clp1Q99LI9 Mir6938-201ENSMUST00000184173 63 ntBASIC4.12□□□□□ -1.75
Clp1Q99LI9 Gm23723-201ENSMUST00000082996 132 ntBASIC4.12□□□□□ -1.75
Clp1Q99LI9 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Clp1Q99LI9 Olfr1369-ps1-203ENSMUST00000213922 3930 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Clp1Q99LI9 Abca5-201ENSMUST00000043961 8231 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 87.3 ms