Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Gm13511-201ENSMUST00000121167 363 ntBASIC4.49□□□□□ -1.69
Col17a1Q07563 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC4.49□□□□□ -1.69
Col17a1Q07563 Gm20415-201ENSMUST00000172877 423 ntBASIC4.49□□□□□ -1.69
Col17a1Q07563 Mir5123-201ENSMUST00000177794 83 ntBASIC4.49□□□□□ -1.69
Col17a1Q07563 Gm23151-201ENSMUST00000178061 107 ntBASIC4.49□□□□□ -1.69
Col17a1Q07563 Gm25473-201ENSMUST00000180191 107 ntBASIC4.49□□□□□ -1.69
Col17a1Q07563 Mir6238-201ENSMUST00000184140 129 ntBASIC4.49□□□□□ -1.69
Col17a1Q07563 Mir8096-201ENSMUST00000184526 127 ntBASIC4.49□□□□□ -1.69
Col17a1Q07563 Gm5552-201ENSMUST00000197149 515 ntBASIC4.49□□□□□ -1.69
Col17a1Q07563 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC4.49□□□□□ -1.69
Col17a1Q07563 Gm7407-201ENSMUST00000208301 568 ntBASIC4.49□□□□□ -1.69
Col17a1Q07563 Gm45859-201ENSMUST00000212794 214 ntBASIC4.49□□□□□ -1.69
Col17a1Q07563 AC160958.1-201ENSMUST00000224833 368 ntBASIC4.49□□□□□ -1.69
Col17a1Q07563 Gm26228-201ENSMUST00000082512 107 ntBASIC4.49□□□□□ -1.69
Col17a1Q07563 Gm25080-201ENSMUST00000082526 107 ntBASIC4.49□□□□□ -1.69
Col17a1Q07563 Gm25518-201ENSMUST00000083864 107 ntBASIC4.49□□□□□ -1.69
Col17a1Q07563 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Col17a1Q07563 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
Col17a1Q07563 Vmn1r80-202ENSMUST00000227205 10892 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Col17a1Q07563 Gm23010-201ENSMUST00000104151 126 ntBASIC4.49□□□□□ -1.69
Col17a1Q07563 Gm12721-201ENSMUST00000120621 268 ntBASIC4.49□□□□□ -1.69
Col17a1Q07563 Gm23585-201ENSMUST00000157656 102 ntBASIC4.49□□□□□ -1.69
Col17a1Q07563 Gm26352-201ENSMUST00000158223 125 ntBASIC4.49□□□□□ -1.69
Col17a1Q07563 Gm25071-201ENSMUST00000175232 70 ntBASIC4.49□□□□□ -1.69
Col17a1Q07563 Ighv1-1-201ENSMUST00000194912 291 ntBASIC4.49□□□□□ -1.69
Col17a1Q07563 Gm43264-201ENSMUST00000202284 325 ntBASIC4.49□□□□□ -1.69
Col17a1Q07563 Hyal6-201ENSMUST00000031690 3452 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Col17a1Q07563 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Col17a1Q07563 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC4.48□□□□□ -1.69
Col17a1Q07563 AC125532.1-201ENSMUST00000216210 2334 ntBASIC4.48□□□□□ -1.69
Col17a1Q07563 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
Col17a1Q07563 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC4.48□□□□□ -1.69
Col17a1Q07563 Gm23262-201ENSMUST00000158323 168 ntBASIC4.48□□□□□ -1.69
Col17a1Q07563 Gm3027-201ENSMUST00000167579 451 ntBASIC4.48□□□□□ -1.69
Col17a1Q07563 Gm3104-201ENSMUST00000171004 473 ntBASIC4.48□□□□□ -1.69
Col17a1Q07563 Gm26400-201ENSMUST00000175012 85 ntBASIC4.48□□□□□ -1.69
Col17a1Q07563 Gm43704-201ENSMUST00000196164 496 ntBASIC4.48□□□□□ -1.69
Col17a1Q07563 Gm20144-201ENSMUST00000203031 165 ntBASIC4.48□□□□□ -1.69
Col17a1Q07563 Gm9068-201ENSMUST00000217393 455 ntBASIC4.48□□□□□ -1.69
Col17a1Q07563 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC4.48□□□□□ -1.69
Col17a1Q07563 AC101945.1-201ENSMUST00000226734 466 ntBASIC4.48□□□□□ -1.69
Col17a1Q07563 Vmn1r72-203ENSMUST00000227010 6279 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Col17a1Q07563 Gm8935-201ENSMUST00000066794 2798 ntBASIC4.48□□□□□ -1.69
Col17a1Q07563 Slco6d1-202ENSMUST00000160796 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
Col17a1Q07563 Neat1-201ENSMUST00000173672 20771 ntBASIC4.47□□□□□ -1.69
Col17a1Q07563 Csmd3-201ENSMUST00000100670 13022 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Col17a1Q07563 Olfr933-202ENSMUST00000216238 4475 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
Col17a1Q07563 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
Col17a1Q07563 Mir881-201ENSMUST00000104844 78 ntBASIC4.47□□□□□ -1.69
Col17a1Q07563 Gm11582-201ENSMUST00000121041 236 ntBASIC4.47□□□□□ -1.69
Col17a1Q07563 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC4.47□□□□□ -1.69
Col17a1Q07563 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Col17a1Q07563 Mir3066-201ENSMUST00000175296 83 ntBASIC4.47□□□□□ -1.69
Col17a1Q07563 Gm23714-201ENSMUST00000179259 105 ntBASIC4.47□□□□□ -1.69
Col17a1Q07563 Gm8807-201ENSMUST00000179328 492 ntBASIC4.47□□□□□ -1.69
Col17a1Q07563 Gm28627-201ENSMUST00000186141 453 ntBASIC4.47□□□□□ -1.69
Col17a1Q07563 Gm37338-201ENSMUST00000191986 127 ntBASIC4.47□□□□□ -1.69
Col17a1Q07563 Gm18964-201ENSMUST00000193013 563 ntBASIC4.47□□□□□ -1.69
Col17a1Q07563 Gm44016-201ENSMUST00000203463 164 ntBASIC4.47□□□□□ -1.69
Col17a1Q07563 Gm45207-201ENSMUST00000207469 145 ntBASIC4.47□□□□□ -1.69
Col17a1Q07563 Gm45002-201ENSMUST00000208045 120 ntBASIC4.47□□□□□ -1.69
Col17a1Q07563 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC4.47□□□□□ -1.69
Col17a1Q07563 Gm5175-202ENSMUST00000219699 529 ntBASIC4.47□□□□□ -1.69
Col17a1Q07563 Gm26164-201ENSMUST00000083793 104 ntBASIC4.47□□□□□ -1.69
Col17a1Q07563 Gm10400-201ENSMUST00000203920 3835 ntBASIC4.46□□□□□ -1.69
Col17a1Q07563 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
Col17a1Q07563 Vmn1r184-202ENSMUST00000227230 7999 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Col17a1Q07563 Gm25466-201ENSMUST00000103995 132 ntBASIC4.46□□□□□ -1.7
Col17a1Q07563 Gm25097-201ENSMUST00000104042 145 ntBASIC4.46□□□□□ -1.7
Col17a1Q07563 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Col17a1Q07563 Gm22290-201ENSMUST00000177655 107 ntBASIC4.46□□□□□ -1.7
Col17a1Q07563 Gm22583-201ENSMUST00000178031 107 ntBASIC4.46□□□□□ -1.7
Col17a1Q07563 Gm37568-201ENSMUST00000191755 364 ntBASIC4.46□□□□□ -1.7
Col17a1Q07563 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC4.46□□□□□ -1.7
Col17a1Q07563 Gm25581-201ENSMUST00000083410 164 ntBASIC4.46□□□□□ -1.7
Col17a1Q07563 Macc1-204ENSMUST00000222058 4193 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Col17a1Q07563 Gm11285-201ENSMUST00000118443 322 ntBASIC4.45□□□□□ -1.7
Col17a1Q07563 Gm15213-201ENSMUST00000122098 216 ntBASIC4.45□□□□□ -1.7
Col17a1Q07563 Gm22097-201ENSMUST00000157929 278 ntBASIC4.45□□□□□ -1.7
Col17a1Q07563 Gm16569-201ENSMUST00000160526 314 ntBASIC4.45□□□□□ -1.7
Col17a1Q07563 Gm27535-201ENSMUST00000183814 157 ntBASIC4.45□□□□□ -1.7
Col17a1Q07563 Gm44408-201ENSMUST00000200205 66 ntBASIC4.45□□□□□ -1.7
Col17a1Q07563 Gm14910-201ENSMUST00000121037 1805 ntBASIC4.45□□□□□ -1.7
Col17a1Q07563 Hmcn1-201ENSMUST00000074783 17908 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Col17a1Q07563 Ifi208-201ENSMUST00000085876 2990 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Col17a1Q07563 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC4.44□□□□□ -1.7
Col17a1Q07563 Gm16032-201ENSMUST00000118534 168 ntBASIC4.44□□□□□ -1.7
Col17a1Q07563 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
Col17a1Q07563 Gm22257-201ENSMUST00000158687 301 ntBASIC4.44□□□□□ -1.7
Col17a1Q07563 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Col17a1Q07563 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Col17a1Q07563 Gm25156-201ENSMUST00000179809 79 ntBASIC4.44□□□□□ -1.7
Col17a1Q07563 Mir8119-201ENSMUST00000183371 129 ntBASIC4.44□□□□□ -1.7
Col17a1Q07563 Gm28921-201ENSMUST00000190219 378 ntBASIC4.44□□□□□ -1.7
Col17a1Q07563 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC4.44□□□□□ -1.7
Col17a1Q07563 Gm44817-201ENSMUST00000205416 453 ntBASIC4.44□□□□□ -1.7
Col17a1Q07563 Gm45704-201ENSMUST00000212582 403 ntBASIC4.44□□□□□ -1.7
Col17a1Q07563 Gm7214-201ENSMUST00000222428 272 ntBASIC4.44□□□□□ -1.7
Col17a1Q07563 Hmgb1l-201ENSMUST00000082150 571 ntBASIC4.44□□□□□ -1.7
Col17a1Q07563 Gm10242-201ENSMUST00000090064 330 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 178.2 ms