Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Gm23231-201ENSMUST00000157299 104 ntBASIC3.43□□□□□ -1.86
Cldnd1Q9CQX5 Gm24787-201ENSMUST00000157380 123 ntBASIC3.43□□□□□ -1.86
Cldnd1Q9CQX5 Gm22722-201ENSMUST00000157467 132 ntBASIC3.43□□□□□ -1.86
Cldnd1Q9CQX5 Gm24959-201ENSMUST00000157924 146 ntBASIC3.43□□□□□ -1.86
Cldnd1Q9CQX5 Gm24958-201ENSMUST00000158009 97 ntBASIC3.43□□□□□ -1.86
Cldnd1Q9CQX5 Gm27579-201ENSMUST00000158113 63 ntBASIC3.43□□□□□ -1.86
Cldnd1Q9CQX5 Gm22833-201ENSMUST00000158292 132 ntBASIC3.43□□□□□ -1.86
Cldnd1Q9CQX5 Gm23759-201ENSMUST00000158351 268 ntBASIC3.43□□□□□ -1.86
Cldnd1Q9CQX5 Gm24086-201ENSMUST00000175171 98 ntBASIC3.43□□□□□ -1.86
Cldnd1Q9CQX5 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC3.43□□□□□ -1.86
Cldnd1Q9CQX5 Gm37801-201ENSMUST00000194754 274 ntBASIC3.43□□□□□ -1.86
Cldnd1Q9CQX5 Gm2077-201ENSMUST00000195017 319 ntBASIC3.43□□□□□ -1.86
Cldnd1Q9CQX5 Trav5d-2-201ENSMUST00000196107 275 ntBASIC3.43□□□□□ -1.86
Cldnd1Q9CQX5 Trav5n-2-201ENSMUST00000197136 275 ntBASIC3.43□□□□□ -1.86
Cldnd1Q9CQX5 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC3.43□□□□□ -1.86
Cldnd1Q9CQX5 AC157572.3-201ENSMUST00000227288 303 ntBASIC3.43□□□□□ -1.86
Cldnd1Q9CQX5 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Cldnd1Q9CQX5 Gm26457-201ENSMUST00000082678 78 ntBASIC3.43□□□□□ -1.86
Cldnd1Q9CQX5 Gm43715-201ENSMUST00000196307 2715 ntBASIC3.43□□□□□ -1.86
Cldnd1Q9CQX5 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Cldnd1Q9CQX5 AC123035.1-201ENSMUST00000213846 2671 ntTSL 5 BASIC3.43□□□□□ -1.86
Cldnd1Q9CQX5 Abi3bp-204ENSMUST00000171000 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
Cldnd1Q9CQX5 Gm15127-203ENSMUST00000112753 1950 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
Cldnd1Q9CQX5 Olfr807-202ENSMUST00000213379 1866 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Cldnd1Q9CQX5 Gm25316-201ENSMUST00000116826 118 ntBASIC3.42□□□□□ -1.86
Cldnd1Q9CQX5 Gm16218-201ENSMUST00000155424 388 ntBASIC3.42□□□□□ -1.86
Cldnd1Q9CQX5 Gm23196-201ENSMUST00000158806 107 ntBASIC3.42□□□□□ -1.86
Cldnd1Q9CQX5 Gm25162-201ENSMUST00000158906 159 ntBASIC3.42□□□□□ -1.86
Cldnd1Q9CQX5 Gm6374-201ENSMUST00000159051 788 ntBASIC3.42□□□□□ -1.86
Cldnd1Q9CQX5 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Cldnd1Q9CQX5 Mir3965-201ENSMUST00000175570 69 ntBASIC3.42□□□□□ -1.86
Cldnd1Q9CQX5 Gm27747-201ENSMUST00000184707 85 ntBASIC3.42□□□□□ -1.86
Cldnd1Q9CQX5 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC3.42□□□□□ -1.86
Cldnd1Q9CQX5 Gm38088-201ENSMUST00000195829 241 ntBASIC3.42□□□□□ -1.86
Cldnd1Q9CQX5 Gm35931-201ENSMUST00000203931 448 ntBASIC3.42□□□□□ -1.86
Cldnd1Q9CQX5 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC3.42□□□□□ -1.86
Cldnd1Q9CQX5 Gm45031-201ENSMUST00000206800 288 ntBASIC3.42□□□□□ -1.86
Cldnd1Q9CQX5 Gm45273-201ENSMUST00000211559 281 ntBASIC3.42□□□□□ -1.86
Cldnd1Q9CQX5 Gm35405-201ENSMUST00000218754 400 ntBASIC3.42□□□□□ -1.86
Cldnd1Q9CQX5 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC3.42□□□□□ -1.86
Cldnd1Q9CQX5 Olfr1162-202ENSMUST00000183862 4800 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
Cldnd1Q9CQX5 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Cldnd1Q9CQX5 Gm36944-201ENSMUST00000192257 2759 ntBASIC3.42□□□□□ -1.86
Cldnd1Q9CQX5 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC3.42□□□□□ -1.86
Cldnd1Q9CQX5 Gm5596-201ENSMUST00000207988 2421 ntBASIC3.42□□□□□ -1.86
Cldnd1Q9CQX5 Vmn1r46-204ENSMUST00000228231 13338 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Cldnd1Q9CQX5 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Cldnd1Q9CQX5 AC132237.1-201ENSMUST00000220950 4475 ntBASIC3.42□□□□□ -1.86
Cldnd1Q9CQX5 Cfh-206ENSMUST00000192880 3746 ntTSL 5 BASIC3.42□□□□□ -1.86
Cldnd1Q9CQX5 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Cldnd1Q9CQX5 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Cldnd1Q9CQX5 Zfp987-201ENSMUST00000091878 2798 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Cldnd1Q9CQX5 AC126033.1-201ENSMUST00000227628 6773 ntBASIC3.41□□□□□ -1.86
Cldnd1Q9CQX5 AC153150.1-201ENSMUST00000226065 3782 ntBASIC3.41□□□□□ -1.86
Cldnd1Q9CQX5 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
Cldnd1Q9CQX5 Gm12646-201ENSMUST00000119144 238 ntBASIC3.41□□□□□ -1.86
Cldnd1Q9CQX5 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC3.41□□□□□ -1.86
Cldnd1Q9CQX5 Gm26256-201ENSMUST00000122499 186 ntBASIC3.41□□□□□ -1.86
Cldnd1Q9CQX5 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Cldnd1Q9CQX5 Gm14684-201ENSMUST00000145722 123 ntTSL 5 BASIC3.41□□□□□ -1.86
Cldnd1Q9CQX5 Gm22814-201ENSMUST00000157452 104 ntBASIC3.41□□□□□ -1.86
Cldnd1Q9CQX5 Gm25456-201ENSMUST00000157952 109 ntBASIC3.41□□□□□ -1.86
Cldnd1Q9CQX5 Gm23257-201ENSMUST00000158322 132 ntBASIC3.41□□□□□ -1.86
Cldnd1Q9CQX5 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Cldnd1Q9CQX5 Gm23921-201ENSMUST00000175258 107 ntBASIC3.41□□□□□ -1.86
Cldnd1Q9CQX5 Gm21827-201ENSMUST00000178247 423 ntBASIC3.41□□□□□ -1.86
Cldnd1Q9CQX5 Gm27532-201ENSMUST00000183726 113 ntBASIC3.41□□□□□ -1.86
Cldnd1Q9CQX5 Gm27694-201ENSMUST00000184740 86 ntBASIC3.41□□□□□ -1.86
Cldnd1Q9CQX5 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC3.41□□□□□ -1.86
Cldnd1Q9CQX5 Gm7871-201ENSMUST00000195346 618 ntBASIC3.41□□□□□ -1.86
Cldnd1Q9CQX5 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC3.41□□□□□ -1.86
Cldnd1Q9CQX5 Gm43415-201ENSMUST00000201934 750 ntBASIC3.41□□□□□ -1.86
Cldnd1Q9CQX5 Gm30534-201ENSMUST00000217928 207 ntBASIC3.41□□□□□ -1.86
Cldnd1Q9CQX5 AC241593.1-201ENSMUST00000224768 397 ntBASIC3.41□□□□□ -1.86
Cldnd1Q9CQX5 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Cldnd1Q9CQX5 Gm26449-201ENSMUST00000082452 104 ntBASIC3.41□□□□□ -1.86
Cldnd1Q9CQX5 Gm10222-201ENSMUST00000088336 294 ntBASIC3.41□□□□□ -1.86
Cldnd1Q9CQX5 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Cldnd1Q9CQX5 Gm18337-201ENSMUST00000219023 5762 ntBASIC3.41□□□□□ -1.86
Cldnd1Q9CQX5 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
Cldnd1Q9CQX5 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
Cldnd1Q9CQX5 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
Cldnd1Q9CQX5 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.86
Cldnd1Q9CQX5 Gm22750-201ENSMUST00000102076 103 ntBASIC3.4□□□□□ -1.87
Cldnd1Q9CQX5 Gm24172-201ENSMUST00000104127 117 ntBASIC3.4□□□□□ -1.87
Cldnd1Q9CQX5 Gm15526-201ENSMUST00000112504 204 ntBASIC3.4□□□□□ -1.87
Cldnd1Q9CQX5 Gm13329-201ENSMUST00000117063 265 ntBASIC3.4□□□□□ -1.87
Cldnd1Q9CQX5 Gm13761-201ENSMUST00000117238 807 ntBASIC3.4□□□□□ -1.87
Cldnd1Q9CQX5 Gm15215-201ENSMUST00000117773 489 ntBASIC3.4□□□□□ -1.87
Cldnd1Q9CQX5 Gm14593-201ENSMUST00000119948 294 ntBASIC3.4□□□□□ -1.87
Cldnd1Q9CQX5 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC3.4□□□□□ -1.87
Cldnd1Q9CQX5 Gm22322-201ENSMUST00000157151 111 ntBASIC3.4□□□□□ -1.87
Cldnd1Q9CQX5 Gm24005-201ENSMUST00000158459 296 ntBASIC3.4□□□□□ -1.87
Cldnd1Q9CQX5 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC3.4□□□□□ -1.87
Cldnd1Q9CQX5 Gm24487-201ENSMUST00000178017 63 ntBASIC3.4□□□□□ -1.87
Cldnd1Q9CQX5 Gm24415-201ENSMUST00000180218 107 ntBASIC3.4□□□□□ -1.87
Cldnd1Q9CQX5 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC3.4□□□□□ -1.87
Cldnd1Q9CQX5 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC3.4□□□□□ -1.87
Cldnd1Q9CQX5 Mir7682-201ENSMUST00000198467 58 ntBASIC3.4□□□□□ -1.87
Cldnd1Q9CQX5 Gm44256-201ENSMUST00000203304 335 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 84.9 ms