Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Gm4076-201ENSMUST00000179230 965 ntBASIC1.51□□□□□ -2.17
Lsm1Q8VC85 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
Lsm1Q8VC85 Mir6352-201ENSMUST00000184495 116 ntBASIC1.51□□□□□ -2.17
Lsm1Q8VC85 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC1.51□□□□□ -2.17
Lsm1Q8VC85 Mir3068-202ENSMUST00000197755 79 ntBASIC1.51□□□□□ -2.17
Lsm1Q8VC85 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC1.51□□□□□ -2.17
Lsm1Q8VC85 AC173482.2-201ENSMUST00000224044 750 ntBASIC1.51□□□□□ -2.17
Lsm1Q8VC85 AC115357.1-201ENSMUST00000227575 466 ntBASIC1.51□□□□□ -2.17
Lsm1Q8VC85 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
Lsm1Q8VC85 Gm26328-201ENSMUST00000082821 107 ntBASIC1.51□□□□□ -2.17
Lsm1Q8VC85 Gm25794-201ENSMUST00000083286 107 ntBASIC1.51□□□□□ -2.17
Lsm1Q8VC85 Gm33962-201ENSMUST00000182643 2592 ntBASIC1.51□□□□□ -2.17
Lsm1Q8VC85 Gm23202-201ENSMUST00000104376 129 ntBASIC1.5□□□□□ -2.17
Lsm1Q8VC85 Mir467h-201ENSMUST00000116759 121 ntBASIC1.5□□□□□ -2.17
Lsm1Q8VC85 Gm25541-201ENSMUST00000116888 126 ntBASIC1.5□□□□□ -2.17
Lsm1Q8VC85 Gm14833-201ENSMUST00000118345 1027 ntBASIC1.5□□□□□ -2.17
Lsm1Q8VC85 Gm15452-201ENSMUST00000119877 240 ntBASIC1.5□□□□□ -2.17
Lsm1Q8VC85 Gm25888-201ENSMUST00000157778 302 ntBASIC1.5□□□□□ -2.17
Lsm1Q8VC85 Gm22389-201ENSMUST00000158193 301 ntBASIC1.5□□□□□ -2.17
Lsm1Q8VC85 Gm22862-201ENSMUST00000178593 121 ntBASIC1.5□□□□□ -2.17
Lsm1Q8VC85 Gm8747-201ENSMUST00000195392 751 ntBASIC1.5□□□□□ -2.17
Lsm1Q8VC85 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.5□□□□□ -2.17
Lsm1Q8VC85 Gm43512-201ENSMUST00000198495 176 ntBASIC1.5□□□□□ -2.17
Lsm1Q8VC85 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC1.5□□□□□ -2.17
Lsm1Q8VC85 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.5□□□□□ -2.17
Lsm1Q8VC85 AC156795.1-201ENSMUST00000214655 414 ntBASIC1.5□□□□□ -2.17
Lsm1Q8VC85 AC140477.1-201ENSMUST00000222354 246 ntBASIC1.5□□□□□ -2.17
Lsm1Q8VC85 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
Lsm1Q8VC85 Gm37630-201ENSMUST00000194210 1456 ntBASIC1.5□□□□□ -2.17
Lsm1Q8VC85 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
Lsm1Q8VC85 Gm25485-201ENSMUST00000104120 132 ntBASIC1.49□□□□□ -2.17
Lsm1Q8VC85 Gm15115-201ENSMUST00000121145 264 ntBASIC1.49□□□□□ -2.17
Lsm1Q8VC85 Gm22803-201ENSMUST00000158049 283 ntBASIC1.49□□□□□ -2.17
Lsm1Q8VC85 Gm25243-201ENSMUST00000174912 207 ntBASIC1.49□□□□□ -2.17
Lsm1Q8VC85 Mir28b-201ENSMUST00000175399 80 ntBASIC1.49□□□□□ -2.17
Lsm1Q8VC85 Gm25936-201ENSMUST00000179952 114 ntBASIC1.49□□□□□ -2.17
Lsm1Q8VC85 4932441J04Rik-201ENSMUST00000180708 729 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
Lsm1Q8VC85 Mir6341-201ENSMUST00000183490 121 ntBASIC1.49□□□□□ -2.17
Lsm1Q8VC85 Gm27588-201ENSMUST00000185096 263 ntBASIC1.49□□□□□ -2.17
Lsm1Q8VC85 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC1.49□□□□□ -2.17
Lsm1Q8VC85 Gm28412-201ENSMUST00000187243 177 ntBASIC1.49□□□□□ -2.17
Lsm1Q8VC85 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC1.49□□□□□ -2.17
Lsm1Q8VC85 Gm44128-201ENSMUST00000204909 219 ntBASIC1.49□□□□□ -2.17
Lsm1Q8VC85 AC113305.1-201ENSMUST00000214664 724 ntBASIC1.49□□□□□ -2.17
Lsm1Q8VC85 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC1.49□□□□□ -2.17
Lsm1Q8VC85 AC113031.5-201ENSMUST00000227116 606 ntBASIC1.49□□□□□ -2.17
Lsm1Q8VC85 Gm16976-205ENSMUST00000227324 226 ntBASIC1.49□□□□□ -2.17
Lsm1Q8VC85 AC139350.4-201ENSMUST00000228483 798 ntBASIC1.49□□□□□ -2.17
Lsm1Q8VC85 Olfr385-201ENSMUST00000071553 939 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
Lsm1Q8VC85 Gm22723-201ENSMUST00000083820 129 ntBASIC1.49□□□□□ -2.17
Lsm1Q8VC85 Gm37602-201ENSMUST00000195187 3310 ntBASIC1.49□□□□□ -2.17
Lsm1Q8VC85 Gm27013-202ENSMUST00000205067 1436 ntBASIC1.49□□□□□ -2.17
Lsm1Q8VC85 AC117226.1-201ENSMUST00000221635 3737 ntBASIC1.48□□□□□ -2.17
Lsm1Q8VC85 n-R5s187-201ENSMUST00000122769 111 ntBASIC1.48□□□□□ -2.17
Lsm1Q8VC85 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC1.48□□□□□ -2.17
Lsm1Q8VC85 Gm25625-201ENSMUST00000157221 96 ntBASIC1.48□□□□□ -2.17
Lsm1Q8VC85 Snord13-201ENSMUST00000157627 104 ntBASIC1.48□□□□□ -2.17
Lsm1Q8VC85 Gm24713-201ENSMUST00000178850 107 ntBASIC1.48□□□□□ -2.17
Lsm1Q8VC85 Gm21978-201ENSMUST00000179696 377 ntBASIC1.48□□□□□ -2.17
Lsm1Q8VC85 Gm25448-201ENSMUST00000180065 107 ntBASIC1.48□□□□□ -2.17
Lsm1Q8VC85 Mir6382-201ENSMUST00000184055 110 ntBASIC1.48□□□□□ -2.17
Lsm1Q8VC85 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC1.48□□□□□ -2.17
Lsm1Q8VC85 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC1.48□□□□□ -2.17
Lsm1Q8VC85 Gm37026-201ENSMUST00000191917 535 ntTSL 5 BASIC1.48□□□□□ -2.17
Lsm1Q8VC85 Gm9236-201ENSMUST00000196892 587 ntBASIC1.48□□□□□ -2.17
Lsm1Q8VC85 Gm44564-201ENSMUST00000207985 180 ntBASIC1.48□□□□□ -2.17
Lsm1Q8VC85 Olfr1005-ps1-201ENSMUST00000216207 488 ntBASIC1.48□□□□□ -2.17
Lsm1Q8VC85 AC132954.1-201ENSMUST00000221017 342 ntBASIC1.48□□□□□ -2.17
Lsm1Q8VC85 AC131085.1-201ENSMUST00000224746 656 ntBASIC1.48□□□□□ -2.17
Lsm1Q8VC85 Olfr1037-203ENSMUST00000216020 1359 ntAPPRIS P1 TSL 3 BASIC1.47□□□□□ -2.17
Lsm1Q8VC85 Gm44114-201ENSMUST00000203270 2727 ntBASIC1.47□□□□□ -2.17
Lsm1Q8VC85 Gm22761-201ENSMUST00000102278 96 ntBASIC1.47□□□□□ -2.17
Lsm1Q8VC85 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Lsm1Q8VC85 Gm13439-201ENSMUST00000117541 409 ntBASIC1.47□□□□□ -2.17
Lsm1Q8VC85 Gm11359-201ENSMUST00000120039 567 ntBASIC1.47□□□□□ -2.17
Lsm1Q8VC85 Gm14678-201ENSMUST00000121396 482 ntBASIC1.47□□□□□ -2.17
Lsm1Q8VC85 Gm2020-201ENSMUST00000145242 579 ntBASIC1.47□□□□□ -2.17
Lsm1Q8VC85 Gm22559-201ENSMUST00000157329 134 ntBASIC1.47□□□□□ -2.17
Lsm1Q8VC85 Gm25020-201ENSMUST00000178071 107 ntBASIC1.47□□□□□ -2.17
Lsm1Q8VC85 Gm25156-201ENSMUST00000179809 79 ntBASIC1.47□□□□□ -2.17
Lsm1Q8VC85 Mir6406-201ENSMUST00000183592 120 ntBASIC1.47□□□□□ -2.17
Lsm1Q8VC85 Gm18433-201ENSMUST00000192747 197 ntBASIC1.47□□□□□ -2.17
Lsm1Q8VC85 Gm9377-201ENSMUST00000207227 623 ntBASIC1.47□□□□□ -2.17
Lsm1Q8VC85 Gm26265-201ENSMUST00000083277 135 ntBASIC1.47□□□□□ -2.17
Lsm1Q8VC85 Gm43216-201ENSMUST00000196295 1333 ntBASIC1.46□□□□□ -2.18
Lsm1Q8VC85 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
Lsm1Q8VC85 Gm26147-201ENSMUST00000104479 114 ntBASIC1.46□□□□□ -2.18
Lsm1Q8VC85 Gm25333-201ENSMUST00000158035 246 ntBASIC1.46□□□□□ -2.18
Lsm1Q8VC85 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
Lsm1Q8VC85 Gm42947-201ENSMUST00000198230 675 ntTSL 2 BASIC1.46□□□□□ -2.18
Lsm1Q8VC85 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
Lsm1Q8VC85 Gm45150-201ENSMUST00000206051 467 ntBASIC1.46□□□□□ -2.18
Lsm1Q8VC85 Gm17991-201ENSMUST00000208139 297 ntBASIC1.46□□□□□ -2.18
Lsm1Q8VC85 AC160930.1-201ENSMUST00000227194 337 ntBASIC1.46□□□□□ -2.18
Lsm1Q8VC85 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC1.46□□□□□ -2.18
Lsm1Q8VC85 Gm25853-201ENSMUST00000082793 132 ntBASIC1.46□□□□□ -2.18
Lsm1Q8VC85 Gm23454-201ENSMUST00000083332 133 ntBASIC1.46□□□□□ -2.18
Lsm1Q8VC85 Mir19a-201ENSMUST00000083482 82 ntBASIC1.46□□□□□ -2.18
Lsm1Q8VC85 Mir148b-201ENSMUST00000083626 97 ntBASIC1.46□□□□□ -2.18
Lsm1Q8VC85 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 10.7 ms