Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 AC140254.1-201ENSMUST00000220063 331 ntBASIC3.72□□□□□ -1.81
Ushbp1Q8R370 AC126440.1-201ENSMUST00000227098 349 ntBASIC3.72□□□□□ -1.81
Ushbp1Q8R370 Mir10a-201ENSMUST00000083585 110 ntBASIC3.72□□□□□ -1.81
Ushbp1Q8R370 Gm25410-201ENSMUST00000083758 137 ntBASIC3.72□□□□□ -1.81
Ushbp1Q8R370 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
Ushbp1Q8R370 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
Ushbp1Q8R370 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.81
Ushbp1Q8R370 Gm37096-201ENSMUST00000192317 2058 ntBASIC3.71□□□□□ -1.82
Ushbp1Q8R370 Zfp709-201ENSMUST00000034259 2181 ntTSL 5 BASIC3.71□□□□□ -1.82
Ushbp1Q8R370 Gm22750-201ENSMUST00000102076 103 ntBASIC3.71□□□□□ -1.82
Ushbp1Q8R370 Gm14841-201ENSMUST00000121067 758 ntBASIC3.71□□□□□ -1.82
Ushbp1Q8R370 Gm6762-201ENSMUST00000121769 289 ntBASIC3.71□□□□□ -1.82
Ushbp1Q8R370 Gm27510-201ENSMUST00000158214 64 ntBASIC3.71□□□□□ -1.82
Ushbp1Q8R370 Gm6374-201ENSMUST00000159051 788 ntBASIC3.71□□□□□ -1.82
Ushbp1Q8R370 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC3.71□□□□□ -1.82
Ushbp1Q8R370 Gm9830-201ENSMUST00000178509 357 ntBASIC3.71□□□□□ -1.82
Ushbp1Q8R370 AC133156.1-202ENSMUST00000227284 363 ntBASIC3.71□□□□□ -1.82
Ushbp1Q8R370 Olfr679-204ENSMUST00000215704 5018 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Ushbp1Q8R370 Gm44150-201ENSMUST00000203317 2619 ntBASIC3.71□□□□□ -1.82
Ushbp1Q8R370 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
Ushbp1Q8R370 Gm15088-201ENSMUST00000117973 1508 ntBASIC3.7□□□□□ -1.82
Ushbp1Q8R370 Gm15098-201ENSMUST00000119036 1508 ntBASIC3.7□□□□□ -1.82
Ushbp1Q8R370 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Ushbp1Q8R370 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Ushbp1Q8R370 Gm25308-201ENSMUST00000104171 158 ntBASIC3.7□□□□□ -1.82
Ushbp1Q8R370 Gm13396-201ENSMUST00000120617 271 ntBASIC3.7□□□□□ -1.82
Ushbp1Q8R370 Gm13424-201ENSMUST00000122301 354 ntBASIC3.7□□□□□ -1.82
Ushbp1Q8R370 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC3.7□□□□□ -1.82
Ushbp1Q8R370 Gm27926-201ENSMUST00000157180 66 ntBASIC3.7□□□□□ -1.82
Ushbp1Q8R370 Gm23120-201ENSMUST00000157654 287 ntBASIC3.7□□□□□ -1.82
Ushbp1Q8R370 Gm16289-201ENSMUST00000162079 183 ntBASIC3.7□□□□□ -1.82
Ushbp1Q8R370 Gm29397-201ENSMUST00000185205 333 ntBASIC3.7□□□□□ -1.82
Ushbp1Q8R370 Gm37715-201ENSMUST00000193206 235 ntBASIC3.7□□□□□ -1.82
Ushbp1Q8R370 Gm45207-201ENSMUST00000207469 145 ntBASIC3.7□□□□□ -1.82
Ushbp1Q8R370 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC3.7□□□□□ -1.82
Ushbp1Q8R370 AC130821.1-201ENSMUST00000221997 293 ntBASIC3.7□□□□□ -1.82
Ushbp1Q8R370 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Ushbp1Q8R370 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
Ushbp1Q8R370 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Ushbp1Q8R370 Fsip2-203ENSMUST00000143764 21116 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Ushbp1Q8R370 Olfr1325-203ENSMUST00000216108 3535 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
Ushbp1Q8R370 Olfr107-202ENSMUST00000215894 2512 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Ushbp1Q8R370 Olfr347-202ENSMUST00000216882 3385 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Ushbp1Q8R370 Gm43486-201ENSMUST00000196431 4339 ntBASIC3.69□□□□□ -1.82
Ushbp1Q8R370 Gm25539-201ENSMUST00000116886 122 ntBASIC3.69□□□□□ -1.82
Ushbp1Q8R370 Gm12782-201ENSMUST00000117519 727 ntBASIC3.69□□□□□ -1.82
Ushbp1Q8R370 Gm13443-201ENSMUST00000120770 555 ntBASIC3.69□□□□□ -1.82
Ushbp1Q8R370 Gm22956-201ENSMUST00000122520 80 ntBASIC3.69□□□□□ -1.82
Ushbp1Q8R370 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC3.69□□□□□ -1.82
Ushbp1Q8R370 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Ushbp1Q8R370 Gm27374-201ENSMUST00000183660 81 ntBASIC3.69□□□□□ -1.82
Ushbp1Q8R370 Gm43284-201ENSMUST00000200103 253 ntBASIC3.69□□□□□ -1.82
Ushbp1Q8R370 Gm44520-201ENSMUST00000205447 802 ntBASIC3.69□□□□□ -1.82
Ushbp1Q8R370 Gm44594-201ENSMUST00000208982 407 ntBASIC3.69□□□□□ -1.82
Ushbp1Q8R370 Gm45778-201ENSMUST00000211959 153 ntBASIC3.69□□□□□ -1.82
Ushbp1Q8R370 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC3.69□□□□□ -1.82
Ushbp1Q8R370 AC154271.1-201ENSMUST00000224780 383 ntBASIC3.69□□□□□ -1.82
Ushbp1Q8R370 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC3.69□□□□□ -1.82
Ushbp1Q8R370 Tfpi-204ENSMUST00000111714 3614 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Ushbp1Q8R370 Prl7d1-203ENSMUST00000224026 3657 ntAPPRIS P2 BASIC3.68□□□□□ -1.82
Ushbp1Q8R370 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Ushbp1Q8R370 Gm16242-201ENSMUST00000117741 334 ntBASIC3.68□□□□□ -1.82
Ushbp1Q8R370 Gm27921-201ENSMUST00000183968 108 ntBASIC3.68□□□□□ -1.82
Ushbp1Q8R370 Igkv4-65-201ENSMUST00000196986 358 ntBASIC3.68□□□□□ -1.82
Ushbp1Q8R370 Gm43529-201ENSMUST00000199178 412 ntBASIC3.68□□□□□ -1.82
Ushbp1Q8R370 Gm45005-201ENSMUST00000206640 157 ntBASIC3.68□□□□□ -1.82
Ushbp1Q8R370 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC3.68□□□□□ -1.82
Ushbp1Q8R370 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC3.68□□□□□ -1.82
Ushbp1Q8R370 AC165092.3-201ENSMUST00000223602 282 ntBASIC3.68□□□□□ -1.82
Ushbp1Q8R370 AC108416.2-201ENSMUST00000226792 367 ntBASIC3.68□□□□□ -1.82
Ushbp1Q8R370 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Ushbp1Q8R370 A230004M16Rik-202ENSMUST00000139508 4468 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Ushbp1Q8R370 Gm23142-201ENSMUST00000101848 105 ntBASIC3.67□□□□□ -1.82
Ushbp1Q8R370 Gm26240-201ENSMUST00000101893 105 ntBASIC3.67□□□□□ -1.82
Ushbp1Q8R370 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Ushbp1Q8R370 Mir466b-8-201ENSMUST00000103883 86 ntBASIC3.67□□□□□ -1.82
Ushbp1Q8R370 Gm25728-201ENSMUST00000104525 159 ntBASIC3.67□□□□□ -1.82
Ushbp1Q8R370 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC3.67□□□□□ -1.82
Ushbp1Q8R370 Gm15466-201ENSMUST00000122299 333 ntBASIC3.67□□□□□ -1.82
Ushbp1Q8R370 Gm23704-201ENSMUST00000158844 340 ntBASIC3.67□□□□□ -1.82
Ushbp1Q8R370 Gm21827-201ENSMUST00000178247 423 ntBASIC3.67□□□□□ -1.82
Ushbp1Q8R370 Gm27402-201ENSMUST00000183890 120 ntBASIC3.67□□□□□ -1.82
Ushbp1Q8R370 Gm27648-201ENSMUST00000184315 107 ntBASIC3.67□□□□□ -1.82
Ushbp1Q8R370 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC3.67□□□□□ -1.82
Ushbp1Q8R370 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC3.67□□□□□ -1.82
Ushbp1Q8R370 Gm18433-202ENSMUST00000195682 196 ntBASIC3.67□□□□□ -1.82
Ushbp1Q8R370 Gm43286-201ENSMUST00000197420 424 ntBASIC3.67□□□□□ -1.82
Ushbp1Q8R370 Mir466e-201ENSMUST00000198862 84 ntBASIC3.67□□□□□ -1.82
Ushbp1Q8R370 Mir466c-1-201ENSMUST00000200654 84 ntBASIC3.67□□□□□ -1.82
Ushbp1Q8R370 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC3.67□□□□□ -1.82
Ushbp1Q8R370 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC3.67□□□□□ -1.82
Ushbp1Q8R370 AC144783.2-201ENSMUST00000219089 195 ntBASIC3.67□□□□□ -1.82
Ushbp1Q8R370 AC107757.3-201ENSMUST00000226312 535 ntBASIC3.67□□□□□ -1.82
Ushbp1Q8R370 Gm24948-201ENSMUST00000082866 207 ntBASIC3.67□□□□□ -1.82
Ushbp1Q8R370 Gm23451-201ENSMUST00000083328 122 ntBASIC3.67□□□□□ -1.82
Ushbp1Q8R370 Gm23042-201ENSMUST00000083866 101 ntBASIC3.67□□□□□ -1.82
Ushbp1Q8R370 Vmn1r211-202ENSMUST00000228645 5447 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Ushbp1Q8R370 Gm43256-201ENSMUST00000199995 3091 ntBASIC3.67□□□□□ -1.82
Ushbp1Q8R370 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Ushbp1Q8R370 Olfr847-202ENSMUST00000216839 2385 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 86.9 ms