Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Pcdh19Q80TF3 Gm24282-201ENSMUST00000104232 66 ntBASIC3.99□□□□□ -1.77
Pcdh19Q80TF3 Gm14299-201ENSMUST00000117586 397 ntBASIC3.99□□□□□ -1.77
Pcdh19Q80TF3 Gm13567-201ENSMUST00000118026 247 ntBASIC3.99□□□□□ -1.77
Pcdh19Q80TF3 Gm7618-201ENSMUST00000121643 171 ntBASIC3.99□□□□□ -1.77
Pcdh19Q80TF3 Gm22225-201ENSMUST00000157358 278 ntBASIC3.99□□□□□ -1.77
Pcdh19Q80TF3 Gm23585-201ENSMUST00000157656 102 ntBASIC3.99□□□□□ -1.77
Pcdh19Q80TF3 Gm24745-201ENSMUST00000157840 85 ntBASIC3.99□□□□□ -1.77
Pcdh19Q80TF3 Ighv1-77-201ENSMUST00000170551 294 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Pcdh19Q80TF3 Mir5710-201ENSMUST00000176884 69 ntBASIC3.99□□□□□ -1.77
Pcdh19Q80TF3 Gm25020-201ENSMUST00000178071 107 ntBASIC3.99□□□□□ -1.77
Pcdh19Q80TF3 Cox6b2-206ENSMUST00000182738 423 ntTSL 2 BASIC3.99□□□□□ -1.77
Pcdh19Q80TF3 Gm44337-201ENSMUST00000196553 114 ntBASIC3.99□□□□□ -1.77
Pcdh19Q80TF3 Gm45553-201ENSMUST00000209929 507 ntBASIC3.99□□□□□ -1.77
Pcdh19Q80TF3 Gm46138-201ENSMUST00000215294 426 ntBASIC3.99□□□□□ -1.77
Pcdh19Q80TF3 AC133517.1-202ENSMUST00000224409 233 ntBASIC3.99□□□□□ -1.77
Pcdh19Q80TF3 AC166095.1-203ENSMUST00000224591 233 ntBASIC3.99□□□□□ -1.77
Pcdh19Q80TF3 AC165415.1-201ENSMUST00000228924 273 ntBASIC3.99□□□□□ -1.77
Pcdh19Q80TF3 n-R5s54-201ENSMUST00000083837 112 ntBASIC3.99□□□□□ -1.77
Pcdh19Q80TF3 Olfr470-203ENSMUST00000220193 3080 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Pcdh19Q80TF3 Gm37296-201ENSMUST00000192728 2922 ntBASIC3.99□□□□□ -1.77
Pcdh19Q80TF3 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Pcdh19Q80TF3 Olfr1331-202ENSMUST00000106360 3230 ntAPPRIS P2 TSL 5 BASIC3.99□□□□□ -1.77
Pcdh19Q80TF3 Vmn1r42-202ENSMUST00000226436 4045 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Pcdh19Q80TF3 AC154462.1-201ENSMUST00000228897 2260 ntBASIC3.98□□□□□ -1.77
Pcdh19Q80TF3 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
Pcdh19Q80TF3 Gm45093-201ENSMUST00000206859 2463 ntBASIC3.98□□□□□ -1.77
Pcdh19Q80TF3 Olfr711-202ENSMUST00000207200 2966 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
Pcdh19Q80TF3 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Pcdh19Q80TF3 Olfr194-203ENSMUST00000216519 3705 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Pcdh19Q80TF3 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Pcdh19Q80TF3 Igkv5-45-201ENSMUST00000103366 385 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Pcdh19Q80TF3 Traj43-201ENSMUST00000103699 57 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Pcdh19Q80TF3 Traj31-201ENSMUST00000103710 57 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Pcdh19Q80TF3 Gm15282-201ENSMUST00000117707 300 ntBASIC3.98□□□□□ -1.77
Pcdh19Q80TF3 Gm14107-201ENSMUST00000117774 330 ntBASIC3.98□□□□□ -1.77
Pcdh19Q80TF3 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC3.98□□□□□ -1.77
Pcdh19Q80TF3 Gm11448-201ENSMUST00000120427 450 ntBASIC3.98□□□□□ -1.77
Pcdh19Q80TF3 Gm23098-201ENSMUST00000157552 299 ntBASIC3.98□□□□□ -1.77
Pcdh19Q80TF3 Gm26171-201ENSMUST00000158422 131 ntBASIC3.98□□□□□ -1.77
Pcdh19Q80TF3 Gm24666-201ENSMUST00000158937 167 ntBASIC3.98□□□□□ -1.77
Pcdh19Q80TF3 Gm26157-201ENSMUST00000158974 126 ntBASIC3.98□□□□□ -1.77
Pcdh19Q80TF3 Mir1251-201ENSMUST00000175486 84 ntBASIC3.98□□□□□ -1.77
Pcdh19Q80TF3 Gm27308-201ENSMUST00000184807 233 ntBASIC3.98□□□□□ -1.77
Pcdh19Q80TF3 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC3.98□□□□□ -1.77
Pcdh19Q80TF3 Gm19774-201ENSMUST00000190667 114 ntBASIC3.98□□□□□ -1.77
Pcdh19Q80TF3 Gm43649-201ENSMUST00000196596 391 ntBASIC3.98□□□□□ -1.77
Pcdh19Q80TF3 Gm43730-201ENSMUST00000199863 372 ntBASIC3.98□□□□□ -1.77
Pcdh19Q80TF3 AC165164.2-201ENSMUST00000220313 392 ntTSL 3 BASIC3.98□□□□□ -1.77
Pcdh19Q80TF3 Gm24152-201ENSMUST00000082764 163 ntBASIC3.98□□□□□ -1.77
Pcdh19Q80TF3 Rps6ka3-204ENSMUST00000112493 3671 ntTSL 5 BASIC3.98□□□□□ -1.77
Pcdh19Q80TF3 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Pcdh19Q80TF3 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
Pcdh19Q80TF3 Olfr836-203ENSMUST00000215981 5046 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
Pcdh19Q80TF3 Olfr1183-203ENSMUST00000219871 8353 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Pcdh19Q80TF3 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Pcdh19Q80TF3 Gm37011-201ENSMUST00000195543 2935 ntBASIC3.98□□□□□ -1.77
Pcdh19Q80TF3 Vmn1r171-204ENSMUST00000226733 2918 ntAPPRIS ALT2 BASIC3.98□□□□□ -1.77
Pcdh19Q80TF3 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Pcdh19Q80TF3 Ghr-208ENSMUST00000161561 2749 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Pcdh19Q80TF3 Zfp72-202ENSMUST00000223163 4153 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Pcdh19Q80TF3 Gm1968-201ENSMUST00000100016 348 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Pcdh19Q80TF3 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Pcdh19Q80TF3 Gm24234-201ENSMUST00000104316 107 ntBASIC3.97□□□□□ -1.77
Pcdh19Q80TF3 Gm15714-201ENSMUST00000117168 250 ntBASIC3.97□□□□□ -1.77
Pcdh19Q80TF3 Gm14069-201ENSMUST00000120815 229 ntBASIC3.97□□□□□ -1.77
Pcdh19Q80TF3 Gm25805-201ENSMUST00000122788 108 ntBASIC3.97□□□□□ -1.77
Pcdh19Q80TF3 Gm22859-201ENSMUST00000174978 122 ntBASIC3.97□□□□□ -1.77
Pcdh19Q80TF3 Mir129b-201ENSMUST00000197461 65 ntBASIC3.97□□□□□ -1.77
Pcdh19Q80TF3 Gm43735-201ENSMUST00000198245 809 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Pcdh19Q80TF3 Gm43220-201ENSMUST00000199299 282 ntBASIC3.97□□□□□ -1.77
Pcdh19Q80TF3 Gm44784-201ENSMUST00000207396 460 ntTSL 5 BASIC3.97□□□□□ -1.77
Pcdh19Q80TF3 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC3.97□□□□□ -1.77
Pcdh19Q80TF3 CT010511.1-201ENSMUST00000224570 315 ntBASIC3.97□□□□□ -1.77
Pcdh19Q80TF3 AC183096.1-201ENSMUST00000226392 130 ntBASIC3.97□□□□□ -1.77
Pcdh19Q80TF3 Snord21-201ENSMUST00000082519 94 ntBASIC3.97□□□□□ -1.77
Pcdh19Q80TF3 Mir132-201ENSMUST00000083603 66 ntBASIC3.97□□□□□ -1.77
Pcdh19Q80TF3 Txndc9-204ENSMUST00000193832 3472 ntTSL 2 BASIC3.97□□□□□ -1.77
Pcdh19Q80TF3 Olfr1251-201ENSMUST00000214304 3133 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Pcdh19Q80TF3 Gm4788-202ENSMUST00000111986 2935 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Pcdh19Q80TF3 Gm10400-201ENSMUST00000203920 3835 ntBASIC3.97□□□□□ -1.77
Pcdh19Q80TF3 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Pcdh19Q80TF3 Olfr235-202ENSMUST00000207969 2447 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.77
Pcdh19Q80TF3 Gm43870-201ENSMUST00000205102 4369 ntBASIC3.96□□□□□ -1.77
Pcdh19Q80TF3 Olfr64-201ENSMUST00000081748 5001 ntAPPRIS P1 BASIC3.96□□□□□ -1.77
Pcdh19Q80TF3 Gm42717-201ENSMUST00000197309 3463 ntBASIC3.96□□□□□ -1.78
Pcdh19Q80TF3 Gm31592-201ENSMUST00000217529 3471 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Pcdh19Q80TF3 Olfr1196-203ENSMUST00000216977 4225 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Pcdh19Q80TF3 AC152162.1-201ENSMUST00000225910 2917 ntBASIC3.96□□□□□ -1.78
Pcdh19Q80TF3 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC3.96□□□□□ -1.78
Pcdh19Q80TF3 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Pcdh19Q80TF3 Mdga2-203ENSMUST00000113942 423 ntBASIC3.96□□□□□ -1.78
Pcdh19Q80TF3 Gm12427-201ENSMUST00000117719 302 ntBASIC3.96□□□□□ -1.78
Pcdh19Q80TF3 n-R5s45-201ENSMUST00000122592 110 ntBASIC3.96□□□□□ -1.78
Pcdh19Q80TF3 Gm24905-201ENSMUST00000158129 104 ntBASIC3.96□□□□□ -1.78
Pcdh19Q80TF3 Gm10357-201ENSMUST00000159886 264 ntBASIC3.96□□□□□ -1.78
Pcdh19Q80TF3 Gm6660-201ENSMUST00000179149 468 ntBASIC3.96□□□□□ -1.78
Pcdh19Q80TF3 Gm25457-201ENSMUST00000179509 107 ntBASIC3.96□□□□□ -1.78
Pcdh19Q80TF3 Gm29005-201ENSMUST00000186773 320 ntBASIC3.96□□□□□ -1.78
Pcdh19Q80TF3 Igkv1-136-201ENSMUST00000200635 297 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 89.9 ms