Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 AC140477.1-201ENSMUST00000222354 246 ntBASIC1.76□□□□□ -2.13
Upf3bQ3ULL6 Gm24151-201ENSMUST00000082758 141 ntBASIC1.76□□□□□ -2.13
Upf3bQ3ULL6 Gm45461-201ENSMUST00000211726 4535 ntBASIC1.76□□□□□ -2.13
Upf3bQ3ULL6 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
Upf3bQ3ULL6 4930440C22Rik-201ENSMUST00000185490 1565 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
Upf3bQ3ULL6 Gm44821-201ENSMUST00000208212 2002 ntBASIC1.76□□□□□ -2.13
Upf3bQ3ULL6 Gm33962-201ENSMUST00000182643 2592 ntBASIC1.75□□□□□ -2.13
Upf3bQ3ULL6 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
Upf3bQ3ULL6 Gm22761-201ENSMUST00000102278 96 ntBASIC1.75□□□□□ -2.13
Upf3bQ3ULL6 Gm11786-201ENSMUST00000120799 155 ntBASIC1.75□□□□□ -2.13
Upf3bQ3ULL6 Gm14530-201ENSMUST00000122391 333 ntBASIC1.75□□□□□ -2.13
Upf3bQ3ULL6 Gm15878-201ENSMUST00000127561 306 ntBASIC1.75□□□□□ -2.13
Upf3bQ3ULL6 Tslrn1-201ENSMUST00000129479 747 ntTSL 3 BASIC1.75□□□□□ -2.13
Upf3bQ3ULL6 Gm23048-201ENSMUST00000157237 129 ntBASIC1.75□□□□□ -2.13
Upf3bQ3ULL6 Gm22386-201ENSMUST00000158192 129 ntBASIC1.75□□□□□ -2.13
Upf3bQ3ULL6 Gm5277-201ENSMUST00000164923 556 ntBASIC1.75□□□□□ -2.13
Upf3bQ3ULL6 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC1.75□□□□□ -2.13
Upf3bQ3ULL6 Gm28688-201ENSMUST00000187301 268 ntBASIC1.75□□□□□ -2.13
Upf3bQ3ULL6 Gm28383-201ENSMUST00000187563 139 ntBASIC1.75□□□□□ -2.13
Upf3bQ3ULL6 Gm5116-201ENSMUST00000187732 463 ntBASIC1.75□□□□□ -2.13
Upf3bQ3ULL6 Gm29627-201ENSMUST00000187984 463 ntBASIC1.75□□□□□ -2.13
Upf3bQ3ULL6 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
Upf3bQ3ULL6 Gm29262-201ENSMUST00000190084 196 ntBASIC1.75□□□□□ -2.13
Upf3bQ3ULL6 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
Upf3bQ3ULL6 Gm18160-201ENSMUST00000214279 827 ntBASIC1.75□□□□□ -2.13
Upf3bQ3ULL6 Gm46103-201ENSMUST00000217614 341 ntBASIC1.75□□□□□ -2.13
Upf3bQ3ULL6 AC158521.1-201ENSMUST00000225295 660 ntBASIC1.75□□□□□ -2.13
Upf3bQ3ULL6 Olfr849-201ENSMUST00000063923 939 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
Upf3bQ3ULL6 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
Upf3bQ3ULL6 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
Upf3bQ3ULL6 AC122828.3-201ENSMUST00000223019 3915 ntBASIC1.75□□□□□ -2.13
Upf3bQ3ULL6 Olfr937-202ENSMUST00000215049 2259 ntAPPRIS P1 TSL 3 BASIC1.74□□□□□ -2.13
Upf3bQ3ULL6 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
Upf3bQ3ULL6 Gm23011-201ENSMUST00000104148 132 ntBASIC1.74□□□□□ -2.13
Upf3bQ3ULL6 Gm15110-201ENSMUST00000117545 881 ntBASIC1.74□□□□□ -2.13
Upf3bQ3ULL6 Gm24784-201ENSMUST00000157640 62 ntBASIC1.74□□□□□ -2.13
Upf3bQ3ULL6 Gm26181-201ENSMUST00000157687 106 ntBASIC1.74□□□□□ -2.13
Upf3bQ3ULL6 Gm24053-201ENSMUST00000158620 105 ntBASIC1.74□□□□□ -2.13
Upf3bQ3ULL6 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC1.74□□□□□ -2.13
Upf3bQ3ULL6 Gm25243-201ENSMUST00000174912 207 ntBASIC1.74□□□□□ -2.13
Upf3bQ3ULL6 Gm22716-201ENSMUST00000177596 107 ntBASIC1.74□□□□□ -2.13
Upf3bQ3ULL6 Gm25020-201ENSMUST00000178071 107 ntBASIC1.74□□□□□ -2.13
Upf3bQ3ULL6 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC1.74□□□□□ -2.13
Upf3bQ3ULL6 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
Upf3bQ3ULL6 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC1.74□□□□□ -2.13
Upf3bQ3ULL6 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC1.74□□□□□ -2.13
Upf3bQ3ULL6 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC1.74□□□□□ -2.13
Upf3bQ3ULL6 AC120540.2-201ENSMUST00000221716 387 ntBASIC1.74□□□□□ -2.13
Upf3bQ3ULL6 Gm23517-201ENSMUST00000082830 192 ntBASIC1.74□□□□□ -2.13
Upf3bQ3ULL6 Gm24406-201ENSMUST00000083026 128 ntBASIC1.74□□□□□ -2.13
Upf3bQ3ULL6 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC1.74□□□□□ -2.13
Upf3bQ3ULL6 AC134917.1-201ENSMUST00000220517 1449 ntBASIC1.74□□□□□ -2.13
Upf3bQ3ULL6 Gm15714-201ENSMUST00000117168 250 ntBASIC1.73□□□□□ -2.13
Upf3bQ3ULL6 Gm13378-201ENSMUST00000117483 336 ntBASIC1.73□□□□□ -2.13
Upf3bQ3ULL6 U6.1-201ENSMUST00000157443 101 ntBASIC1.73□□□□□ -2.13
Upf3bQ3ULL6 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC1.73□□□□□ -2.13
Upf3bQ3ULL6 Gm25361-201ENSMUST00000179358 76 ntBASIC1.73□□□□□ -2.13
Upf3bQ3ULL6 Gm27511-201ENSMUST00000183502 127 ntBASIC1.73□□□□□ -2.13
Upf3bQ3ULL6 Gtpbp4-ps2-201ENSMUST00000184058 256 ntBASIC1.73□□□□□ -2.13
Upf3bQ3ULL6 Gm28058-201ENSMUST00000186421 264 ntBASIC1.73□□□□□ -2.13
Upf3bQ3ULL6 Gm29216-201ENSMUST00000187117 492 ntBASIC1.73□□□□□ -2.13
Upf3bQ3ULL6 Gm28956-201ENSMUST00000189047 427 ntBASIC1.73□□□□□ -2.13
Upf3bQ3ULL6 Gm28299-201ENSMUST00000189908 339 ntBASIC1.73□□□□□ -2.13
Upf3bQ3ULL6 Mir3068-202ENSMUST00000197755 79 ntBASIC1.73□□□□□ -2.13
Upf3bQ3ULL6 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC1.73□□□□□ -2.13
Upf3bQ3ULL6 AC114010.1-201ENSMUST00000222060 379 ntBASIC1.73□□□□□ -2.13
Upf3bQ3ULL6 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC1.73□□□□□ -2.13
Upf3bQ3ULL6 Mir148b-201ENSMUST00000083626 97 ntBASIC1.73□□□□□ -2.13
Upf3bQ3ULL6 Snora33-201ENSMUST00000093556 129 ntBASIC1.73□□□□□ -2.13
Upf3bQ3ULL6 AC117226.1-201ENSMUST00000221635 3737 ntBASIC1.73□□□□□ -2.13
Upf3bQ3ULL6 Gm19428-201ENSMUST00000220512 1995 ntBASIC1.72□□□□□ -2.13
Upf3bQ3ULL6 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
Upf3bQ3ULL6 Gm14417-201ENSMUST00000120036 1074 ntBASIC1.72□□□□□ -2.13
Upf3bQ3ULL6 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
Upf3bQ3ULL6 Gm23381-201ENSMUST00000157676 94 ntBASIC1.72□□□□□ -2.13
Upf3bQ3ULL6 Ear-ps4-201ENSMUST00000166834 450 ntBASIC1.72□□□□□ -2.13
Upf3bQ3ULL6 Gm17054-201ENSMUST00000169811 259 ntBASIC1.72□□□□□ -2.13
Upf3bQ3ULL6 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC1.72□□□□□ -2.13
Upf3bQ3ULL6 Olfr1470-ps1-201ENSMUST00000208620 949 ntBASIC1.72□□□□□ -2.13
Upf3bQ3ULL6 Gm45754-201ENSMUST00000212380 279 ntBASIC1.72□□□□□ -2.13
Upf3bQ3ULL6 AC137902.2-201ENSMUST00000227989 576 ntBASIC1.72□□□□□ -2.13
Upf3bQ3ULL6 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
Upf3bQ3ULL6 Gm44578-201ENSMUST00000207236 3835 ntBASIC1.72□□□□□ -2.13
Upf3bQ3ULL6 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
Upf3bQ3ULL6 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
Upf3bQ3ULL6 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
Upf3bQ3ULL6 Gm23202-201ENSMUST00000104376 129 ntBASIC1.71□□□□□ -2.14
Upf3bQ3ULL6 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
Upf3bQ3ULL6 Gm11363-201ENSMUST00000121672 548 ntBASIC1.71□□□□□ -2.14
Upf3bQ3ULL6 Gm24897-201ENSMUST00000179033 107 ntBASIC1.71□□□□□ -2.14
Upf3bQ3ULL6 Gm29231-201ENSMUST00000179850 319 ntBASIC1.71□□□□□ -2.14
Upf3bQ3ULL6 Gm5900-201ENSMUST00000179862 375 ntBASIC1.71□□□□□ -2.14
Upf3bQ3ULL6 Gm26864-201ENSMUST00000181346 156 ntBASIC1.71□□□□□ -2.14
Upf3bQ3ULL6 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
Upf3bQ3ULL6 Gm43731-201ENSMUST00000196150 666 ntTSL 3 BASIC1.71□□□□□ -2.14
Upf3bQ3ULL6 Gm42925-201ENSMUST00000197359 285 ntBASIC1.71□□□□□ -2.14
Upf3bQ3ULL6 Tas2r142-ps5-201ENSMUST00000204651 929 ntBASIC1.71□□□□□ -2.14
Upf3bQ3ULL6 Gm45071-201ENSMUST00000205353 571 ntBASIC1.71□□□□□ -2.14
Upf3bQ3ULL6 Gm45382-201ENSMUST00000210607 151 ntBASIC1.71□□□□□ -2.14
Upf3bQ3ULL6 Gm45730-201ENSMUST00000212560 395 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 100.9 ms