Protein–RNA interactions for Protein: Q3U319

Rnf40, E3 ubiquitin-protein ligase BRE1B, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40Q3U319 AC125374.3-201ENSMUST00000214983 2810 ntBASIC4.71□□□□□ -1.66
Rnf40Q3U319 Gm25758-201ENSMUST00000103987 129 ntBASIC4.71□□□□□ -1.66
Rnf40Q3U319 Gm12443-201ENSMUST00000122308 323 ntBASIC4.71□□□□□ -1.66
Rnf40Q3U319 Gm24961-201ENSMUST00000157918 184 ntBASIC4.71□□□□□ -1.66
Rnf40Q3U319 Gm22314-201ENSMUST00000158007 281 ntBASIC4.71□□□□□ -1.66
Rnf40Q3U319 Lockd-204ENSMUST00000184991 243 ntTSL 5 BASIC4.71□□□□□ -1.66
Rnf40Q3U319 Gm34139-201ENSMUST00000196166 294 ntBASIC4.71□□□□□ -1.66
Rnf40Q3U319 Mir6994-201ENSMUST00000198985 73 ntBASIC4.71□□□□□ -1.66
Rnf40Q3U319 Igkv1-136-201ENSMUST00000200635 297 ntBASIC4.71□□□□□ -1.66
Rnf40Q3U319 AC167669.4-201ENSMUST00000225967 140 ntBASIC4.71□□□□□ -1.66
Rnf40Q3U319 Gm23445-201ENSMUST00000082800 107 ntBASIC4.71□□□□□ -1.66
Rnf40Q3U319 Snord61-201ENSMUST00000083176 71 ntBASIC4.71□□□□□ -1.66
Rnf40Q3U319 Olfr933-202ENSMUST00000216238 4475 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
Rnf40Q3U319 Gm38057-201ENSMUST00000195551 3203 ntBASIC4.7□□□□□ -1.66
Rnf40Q3U319 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
Rnf40Q3U319 Gm36931-201ENSMUST00000192997 4801 ntBASIC4.7□□□□□ -1.66
Rnf40Q3U319 AC155921.1-201ENSMUST00000216568 3841 ntBASIC4.7□□□□□ -1.66
Rnf40Q3U319 Gm44542-201ENSMUST00000208677 4314 ntBASIC4.7□□□□□ -1.66
Rnf40Q3U319 Cysltr1-202ENSMUST00000113480 5142 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Rnf40Q3U319 Pde1a-206ENSMUST00000102655 4258 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Rnf40Q3U319 Gm14512-201ENSMUST00000117924 230 ntBASIC4.7□□□□□ -1.66
Rnf40Q3U319 Gm12934-201ENSMUST00000119221 343 ntBASIC4.7□□□□□ -1.66
Rnf40Q3U319 Gm15861-201ENSMUST00000120979 339 ntBASIC4.7□□□□□ -1.66
Rnf40Q3U319 Gm14649-201ENSMUST00000121814 324 ntBASIC4.7□□□□□ -1.66
Rnf40Q3U319 Gm22586-201ENSMUST00000157507 122 ntBASIC4.7□□□□□ -1.66
Rnf40Q3U319 Gm26172-201ENSMUST00000158421 134 ntBASIC4.7□□□□□ -1.66
Rnf40Q3U319 Gm17160-201ENSMUST00000170645 260 ntTSL 3 BASIC4.7□□□□□ -1.66
Rnf40Q3U319 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Rnf40Q3U319 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC4.7□□□□□ -1.66
Rnf40Q3U319 Gm28429-201ENSMUST00000188521 363 ntBASIC4.7□□□□□ -1.66
Rnf40Q3U319 Gm43554-201ENSMUST00000199987 186 ntBASIC4.7□□□□□ -1.66
Rnf40Q3U319 Gm17779-201ENSMUST00000213395 394 ntBASIC4.7□□□□□ -1.66
Rnf40Q3U319 AC164086.1-201ENSMUST00000221038 289 ntBASIC4.7□□□□□ -1.66
Rnf40Q3U319 AC166113.1-201ENSMUST00000225258 475 ntBASIC4.7□□□□□ -1.66
Rnf40Q3U319 n-R5s173-201ENSMUST00000082620 119 ntBASIC4.7□□□□□ -1.66
Rnf40Q3U319 Gm22299-201ENSMUST00000082663 136 ntBASIC4.7□□□□□ -1.66
Rnf40Q3U319 Mir369-201ENSMUST00000083627 79 ntBASIC4.7□□□□□ -1.66
Rnf40Q3U319 Olfr613-201ENSMUST00000106888 5139 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Rnf40Q3U319 Arhgef6-201ENSMUST00000033468 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Rnf40Q3U319 9330158H04Rik-201ENSMUST00000101535 3174 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Rnf40Q3U319 Gm36960-201ENSMUST00000195491 2035 ntBASIC4.7□□□□□ -1.66
Rnf40Q3U319 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Rnf40Q3U319 Olfr270-203ENSMUST00000215010 2502 ntAPPRIS ALT1 TSL 5 BASIC4.7□□□□□ -1.66
Rnf40Q3U319 Zfp426-201ENSMUST00000080386 2417 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
Rnf40Q3U319 Olfr639-202ENSMUST00000215653 6570 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Rnf40Q3U319 Olfr247-202ENSMUST00000215871 1983 ntAPPRIS P5 TSL 5 BASIC4.69□□□□□ -1.66
Rnf40Q3U319 Ano5-201ENSMUST00000043944 7785 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Rnf40Q3U319 Gm26249-201ENSMUST00000116708 118 ntBASIC4.69□□□□□ -1.66
Rnf40Q3U319 Gm22679-201ENSMUST00000116975 100 ntBASIC4.69□□□□□ -1.66
Rnf40Q3U319 Gm14536-201ENSMUST00000118324 138 ntBASIC4.69□□□□□ -1.66
Rnf40Q3U319 Gm15027-201ENSMUST00000120922 138 ntBASIC4.69□□□□□ -1.66
Rnf40Q3U319 Gm22036-201ENSMUST00000157279 215 ntBASIC4.69□□□□□ -1.66
Rnf40Q3U319 Mir1970-201ENSMUST00000157839 104 ntBASIC4.69□□□□□ -1.66
Rnf40Q3U319 Gm23080-201ENSMUST00000157846 103 ntBASIC4.69□□□□□ -1.66
Rnf40Q3U319 Gm23504-201ENSMUST00000158988 95 ntBASIC4.69□□□□□ -1.66
Rnf40Q3U319 Gm7609-204ENSMUST00000161424 461 ntBASIC4.69□□□□□ -1.66
Rnf40Q3U319 Clec9a-203ENSMUST00000164513 714 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Rnf40Q3U319 Gm27718-201ENSMUST00000183721 86 ntBASIC4.69□□□□□ -1.66
Rnf40Q3U319 Gm27520-201ENSMUST00000184872 81 ntBASIC4.69□□□□□ -1.66
Rnf40Q3U319 Gm28409-201ENSMUST00000187064 103 ntBASIC4.69□□□□□ -1.66
Rnf40Q3U319 Trav7d-5-201ENSMUST00000197128 340 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Rnf40Q3U319 Trav7n-5-201ENSMUST00000199753 340 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Rnf40Q3U319 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC4.69□□□□□ -1.66
Rnf40Q3U319 Gm19256-201ENSMUST00000218550 231 ntBASIC4.69□□□□□ -1.66
Rnf40Q3U319 Gm35041-201ENSMUST00000219581 602 ntTSL 3 BASIC4.69□□□□□ -1.66
Rnf40Q3U319 AC147101.2-201ENSMUST00000219756 184 ntBASIC4.69□□□□□ -1.66
Rnf40Q3U319 AC154548.1-201ENSMUST00000225844 3838 ntBASIC4.69□□□□□ -1.66
Rnf40Q3U319 AL607142.1-201ENSMUST00000226560 78 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Rnf40Q3U319 AC166369.3-201ENSMUST00000227286 409 ntBASIC4.69□□□□□ -1.66
Rnf40Q3U319 Gm23300-201ENSMUST00000082712 125 ntBASIC4.69□□□□□ -1.66
Rnf40Q3U319 Klhl13-204ENSMUST00000115317 3216 ntAPPRIS ALT1 TSL 5 BASIC4.69□□□□□ -1.66
Rnf40Q3U319 Trpc5os-202ENSMUST00000178233 3515 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Rnf40Q3U319 Ptgs2-201ENSMUST00000035065 4453 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Rnf40Q3U319 AC156560.3-201ENSMUST00000222978 3841 ntBASIC4.69□□□□□ -1.66
Rnf40Q3U319 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Rnf40Q3U319 Sbno1-201ENSMUST00000065263 10071 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Rnf40Q3U319 Olfr694-204ENSMUST00000216895 4853 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Rnf40Q3U319 Vmn1r22-202ENSMUST00000227650 3674 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Rnf40Q3U319 Olfr1097-201ENSMUST00000111576 4705 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
Rnf40Q3U319 Vmn1r14-204ENSMUST00000227768 7005 ntAPPRIS P2 BASIC4.68□□□□□ -1.66
Rnf40Q3U319 Btbd35f17-201ENSMUST00000105014 1960 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Rnf40Q3U319 Trav2-201ENSMUST00000103568 325 ntAPPRIS ALT2 BASIC4.68□□□□□ -1.66
Rnf40Q3U319 Gm23750-201ENSMUST00000104222 132 ntBASIC4.68□□□□□ -1.66
Rnf40Q3U319 Gm24232-201ENSMUST00000104314 132 ntBASIC4.68□□□□□ -1.66
Rnf40Q3U319 Gm23772-201ENSMUST00000104433 102 ntBASIC4.68□□□□□ -1.66
Rnf40Q3U319 Gm11912-201ENSMUST00000117235 264 ntBASIC4.68□□□□□ -1.66
Rnf40Q3U319 Gm12173-201ENSMUST00000117622 273 ntBASIC4.68□□□□□ -1.66
Rnf40Q3U319 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC4.68□□□□□ -1.66
Rnf40Q3U319 Gm15735-201ENSMUST00000136187 514 ntTSL 3 BASIC4.68□□□□□ -1.66
Rnf40Q3U319 Gm24898-201ENSMUST00000158133 106 ntBASIC4.68□□□□□ -1.66
Rnf40Q3U319 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC4.68□□□□□ -1.66
Rnf40Q3U319 Gm18546-201ENSMUST00000197245 676 ntBASIC4.68□□□□□ -1.66
Rnf40Q3U319 Gm2011-203ENSMUST00000203750 435 ntBASIC4.68□□□□□ -1.66
Rnf40Q3U319 AL807824.1-201ENSMUST00000223151 183 ntBASIC4.68□□□□□ -1.66
Rnf40Q3U319 Spink1-201ENSMUST00000025381 422 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Rnf40Q3U319 Gm5215-201ENSMUST00000054380 405 ntBASIC4.68□□□□□ -1.66
Rnf40Q3U319 n-R5s152-201ENSMUST00000093641 119 ntBASIC4.68□□□□□ -1.66
Rnf40Q3U319 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Rnf40Q3U319 Adgrg2-201ENSMUST00000112398 3418 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
Rnf40Q3U319 Nebl-202ENSMUST00000124270 8079 ntTSL 5 BASIC4.68□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 85.8 ms