Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Gm21827-201ENSMUST00000178247 423 ntBASIC4.2□□□□□ -1.74
Col6a1Q04857 A630033H20Rik-206ENSMUST00000180182 2997 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
Col6a1Q04857 Gm38332-201ENSMUST00000194189 147 ntBASIC4.2□□□□□ -1.74
Col6a1Q04857 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC4.2□□□□□ -1.74
Col6a1Q04857 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC4.2□□□□□ -1.74
Col6a1Q04857 AC105958.2-201ENSMUST00000214167 191 ntBASIC4.2□□□□□ -1.74
Col6a1Q04857 Gm7065-201ENSMUST00000222150 474 ntBASIC4.2□□□□□ -1.74
Col6a1Q04857 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Col6a1Q04857 9430025C20Rik-201ENSMUST00000068663 2115 ntBASIC4.2□□□□□ -1.74
Col6a1Q04857 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Col6a1Q04857 Gm23518-201ENSMUST00000082835 153 ntBASIC4.2□□□□□ -1.74
Col6a1Q04857 Mir21a-201ENSMUST00000083521 92 ntBASIC4.2□□□□□ -1.74
Col6a1Q04857 AF357428-201ENSMUST00000083815 69 ntBASIC4.2□□□□□ -1.74
Col6a1Q04857 Gm25257-201ENSMUST00000083907 110 ntBASIC4.2□□□□□ -1.74
Col6a1Q04857 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Col6a1Q04857 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
Col6a1Q04857 Gm44120-201ENSMUST00000203022 3023 ntBASIC4.19□□□□□ -1.74
Col6a1Q04857 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
Col6a1Q04857 Gm4788-203ENSMUST00000111989 3187 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
Col6a1Q04857 9530051G07Rik-201ENSMUST00000127673 4414 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Col6a1Q04857 Vwc2l-203ENSMUST00000161937 4323 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Col6a1Q04857 Olfr661-202ENSMUST00000214876 3790 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Col6a1Q04857 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Col6a1Q04857 Gm24318-201ENSMUST00000104490 131 ntBASIC4.19□□□□□ -1.74
Col6a1Q04857 Gemin6-ps-201ENSMUST00000120444 501 ntBASIC4.19□□□□□ -1.74
Col6a1Q04857 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC4.19□□□□□ -1.74
Col6a1Q04857 Gm25967-201ENSMUST00000157168 147 ntBASIC4.19□□□□□ -1.74
Col6a1Q04857 Gm23602-201ENSMUST00000157258 132 ntBASIC4.19□□□□□ -1.74
Col6a1Q04857 Gm22315-201ENSMUST00000158010 143 ntBASIC4.19□□□□□ -1.74
Col6a1Q04857 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Col6a1Q04857 Gm30674-201ENSMUST00000214523 392 ntBASIC4.19□□□□□ -1.74
Col6a1Q04857 AC188459.1-201ENSMUST00000216651 300 ntBASIC4.19□□□□□ -1.74
Col6a1Q04857 AC115735.2-201ENSMUST00000227135 351 ntBASIC4.19□□□□□ -1.74
Col6a1Q04857 Mir133a-1-201ENSMUST00000083465 68 ntBASIC4.19□□□□□ -1.74
Col6a1Q04857 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
Col6a1Q04857 Ccr1-201ENSMUST00000026911 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Col6a1Q04857 AC155921.1-201ENSMUST00000216568 3841 ntBASIC4.19□□□□□ -1.74
Col6a1Q04857 Gm37006-201ENSMUST00000195253 2674 ntBASIC4.18□□□□□ -1.74
Col6a1Q04857 Gm14015-201ENSMUST00000130634 3949 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Col6a1Q04857 Olfr112-205ENSMUST00000213274 3558 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Col6a1Q04857 Olfr1211-204ENSMUST00000215205 4220 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Col6a1Q04857 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Col6a1Q04857 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Col6a1Q04857 Gm23990-201ENSMUST00000117031 117 ntBASIC4.18□□□□□ -1.74
Col6a1Q04857 Gm15377-201ENSMUST00000119594 246 ntBASIC4.18□□□□□ -1.74
Col6a1Q04857 Gm11456-201ENSMUST00000121070 256 ntBASIC4.18□□□□□ -1.74
Col6a1Q04857 Gm11819-201ENSMUST00000122192 372 ntBASIC4.18□□□□□ -1.74
Col6a1Q04857 n-R5s179-201ENSMUST00000122564 118 ntBASIC4.18□□□□□ -1.74
Col6a1Q04857 Gm26026-201ENSMUST00000122726 123 ntBASIC4.18□□□□□ -1.74
Col6a1Q04857 Gm12238-201ENSMUST00000127764 124 ntBASIC4.18□□□□□ -1.74
Col6a1Q04857 Gm23640-201ENSMUST00000157860 104 ntBASIC4.18□□□□□ -1.74
Col6a1Q04857 Gm25015-201ENSMUST00000158400 128 ntBASIC4.18□□□□□ -1.74
Col6a1Q04857 Gm23198-201ENSMUST00000158811 91 ntBASIC4.18□□□□□ -1.74
Col6a1Q04857 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Col6a1Q04857 Gm24811-201ENSMUST00000175313 100 ntBASIC4.18□□□□□ -1.74
Col6a1Q04857 Gm27285-201ENSMUST00000183875 127 ntBASIC4.18□□□□□ -1.74
Col6a1Q04857 Gm27828-201ENSMUST00000184108 119 ntBASIC4.18□□□□□ -1.74
Col6a1Q04857 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC4.18□□□□□ -1.74
Col6a1Q04857 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC4.18□□□□□ -1.74
Col6a1Q04857 Gm30341-201ENSMUST00000194363 289 ntBASIC4.18□□□□□ -1.74
Col6a1Q04857 Igkv13-78-1-201ENSMUST00000199298 200 ntBASIC4.18□□□□□ -1.74
Col6a1Q04857 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC4.18□□□□□ -1.74
Col6a1Q04857 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Col6a1Q04857 Gm25698-201ENSMUST00000082897 107 ntBASIC4.18□□□□□ -1.74
Col6a1Q04857 Gm25480-201ENSMUST00000083217 133 ntBASIC4.18□□□□□ -1.74
Col6a1Q04857 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC4.18□□□□□ -1.74
Col6a1Q04857 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Col6a1Q04857 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Col6a1Q04857 Slfn8-201ENSMUST00000038141 4011 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Col6a1Q04857 Vmn2r67-201ENSMUST00000168730 2556 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Col6a1Q04857 Olfr706-202ENSMUST00000213918 4828 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Col6a1Q04857 Gm42909-201ENSMUST00000196982 3619 ntBASIC4.17□□□□□ -1.74
Col6a1Q04857 Gm45389-201ENSMUST00000211163 3399 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Col6a1Q04857 Olfr418-202ENSMUST00000213420 4388 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Col6a1Q04857 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC4.17□□□□□ -1.74
Col6a1Q04857 Snord19-201ENSMUST00000104609 76 ntBASIC4.17□□□□□ -1.74
Col6a1Q04857 Gm24132-201ENSMUST00000104745 91 ntBASIC4.17□□□□□ -1.74
Col6a1Q04857 Gm11566-201ENSMUST00000118550 203 ntBASIC4.17□□□□□ -1.74
Col6a1Q04857 Gm11704-201ENSMUST00000120031 214 ntBASIC4.17□□□□□ -1.74
Col6a1Q04857 Gm16354-201ENSMUST00000155376 150 ntBASIC4.17□□□□□ -1.74
Col6a1Q04857 Gm23956-201ENSMUST00000157211 119 ntBASIC4.17□□□□□ -1.74
Col6a1Q04857 Gm25914-201ENSMUST00000157618 153 ntBASIC4.17□□□□□ -1.74
Col6a1Q04857 Gm22989-201ENSMUST00000158313 86 ntBASIC4.17□□□□□ -1.74
Col6a1Q04857 Gm6625-201ENSMUST00000177870 272 ntBASIC4.17□□□□□ -1.74
Col6a1Q04857 Gm27308-201ENSMUST00000184807 233 ntBASIC4.17□□□□□ -1.74
Col6a1Q04857 AC123803.1-201ENSMUST00000216093 189 ntBASIC4.17□□□□□ -1.74
Col6a1Q04857 AC133517.1-202ENSMUST00000224409 233 ntBASIC4.17□□□□□ -1.74
Col6a1Q04857 AC166095.1-203ENSMUST00000224591 233 ntBASIC4.17□□□□□ -1.74
Col6a1Q04857 AL627387.1-201ENSMUST00000226063 250 ntBASIC4.17□□□□□ -1.74
Col6a1Q04857 Olfr715-202ENSMUST00000214919 5114 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Col6a1Q04857 Gm43259-201ENSMUST00000198446 3277 ntBASIC4.17□□□□□ -1.74
Col6a1Q04857 Olfr235-202ENSMUST00000207969 2447 ntAPPRIS P1 TSL 3 BASIC4.17□□□□□ -1.74
Col6a1Q04857 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC4.17□□□□□ -1.74
Col6a1Q04857 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC4.17□□□□□ -1.74
Col6a1Q04857 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
Col6a1Q04857 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Col6a1Q04857 AC155830.1-201ENSMUST00000220050 3836 ntBASIC4.16□□□□□ -1.74
Col6a1Q04857 Gm24096-201ENSMUST00000103905 110 ntBASIC4.16□□□□□ -1.74
Col6a1Q04857 Gm23747-201ENSMUST00000104228 131 ntBASIC4.16□□□□□ -1.74
Col6a1Q04857 Gm25321-201ENSMUST00000122558 102 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 88.1 ms