Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC4.25□□□□□ -1.73
Trim56Q80VI1 Gm24950-201ENSMUST00000082768 191 ntBASIC4.25□□□□□ -1.73
Trim56Q80VI1 Gm23971-201ENSMUST00000083317 191 ntBASIC4.25□□□□□ -1.73
Trim56Q80VI1 Gm22744-201ENSMUST00000083444 65 ntBASIC4.25□□□□□ -1.73
Trim56Q80VI1 Gm25651-201ENSMUST00000083782 119 ntBASIC4.25□□□□□ -1.73
Trim56Q80VI1 Gm23849-201ENSMUST00000083833 191 ntBASIC4.25□□□□□ -1.73
Trim56Q80VI1 Gm26316-201ENSMUST00000083886 191 ntBASIC4.25□□□□□ -1.73
Trim56Q80VI1 Gm26314-201ENSMUST00000083891 107 ntBASIC4.25□□□□□ -1.73
Trim56Q80VI1 Rnu2-10-201ENSMUST00000084010 191 ntBASIC4.25□□□□□ -1.73
Trim56Q80VI1 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC4.25□□□□□ -1.73
Trim56Q80VI1 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Trim56Q80VI1 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Trim56Q80VI1 4932415D10Rik-202ENSMUST00000217661 15111 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Trim56Q80VI1 Gm25727-201ENSMUST00000104522 131 ntBASIC4.24□□□□□ -1.73
Trim56Q80VI1 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Trim56Q80VI1 Gm15896-201ENSMUST00000118045 440 ntBASIC4.24□□□□□ -1.73
Trim56Q80VI1 Trav20-201ENSMUST00000142754 347 ntBASIC4.24□□□□□ -1.73
Trim56Q80VI1 Gm22321-201ENSMUST00000157152 104 ntBASIC4.24□□□□□ -1.73
Trim56Q80VI1 Gm22034-201ENSMUST00000157283 134 ntBASIC4.24□□□□□ -1.73
Trim56Q80VI1 Gm23586-201ENSMUST00000157657 123 ntBASIC4.24□□□□□ -1.73
Trim56Q80VI1 Gm24084-201ENSMUST00000175173 137 ntBASIC4.24□□□□□ -1.73
Trim56Q80VI1 Gm26141-201ENSMUST00000175299 126 ntBASIC4.24□□□□□ -1.73
Trim56Q80VI1 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Trim56Q80VI1 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC4.24□□□□□ -1.73
Trim56Q80VI1 Gm45420-201ENSMUST00000211243 425 ntBASIC4.24□□□□□ -1.73
Trim56Q80VI1 Cp-205ENSMUST00000108329 4564 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
Trim56Q80VI1 Gm43824-201ENSMUST00000199042 2588 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Trim56Q80VI1 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Trim56Q80VI1 A230081H15Rik-201ENSMUST00000218326 2929 ntBASIC4.24□□□□□ -1.73
Trim56Q80VI1 Gm15902-202ENSMUST00000219623 3477 ntBASIC4.23□□□□□ -1.73
Trim56Q80VI1 Gm43883-201ENSMUST00000204002 3750 ntBASIC4.23□□□□□ -1.73
Trim56Q80VI1 Olfr1249-202ENSMUST00000216124 3047 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Trim56Q80VI1 Gm22784-201ENSMUST00000104088 132 ntBASIC4.23□□□□□ -1.73
Trim56Q80VI1 Gm13155-201ENSMUST00000119277 646 ntBASIC4.23□□□□□ -1.73
Trim56Q80VI1 Gm8178-201ENSMUST00000121570 646 ntBASIC4.23□□□□□ -1.73
Trim56Q80VI1 Gm13345-201ENSMUST00000121928 228 ntBASIC4.23□□□□□ -1.73
Trim56Q80VI1 Gm25783-201ENSMUST00000122525 190 ntBASIC4.23□□□□□ -1.73
Trim56Q80VI1 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC4.23□□□□□ -1.73
Trim56Q80VI1 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC4.23□□□□□ -1.73
Trim56Q80VI1 Gm23641-201ENSMUST00000157857 101 ntBASIC4.23□□□□□ -1.73
Trim56Q80VI1 Mir1934-201ENSMUST00000158127 83 ntBASIC4.23□□□□□ -1.73
Trim56Q80VI1 Gm16326-201ENSMUST00000162843 414 ntBASIC4.23□□□□□ -1.73
Trim56Q80VI1 Gm5967-201ENSMUST00000172723 494 ntBASIC4.23□□□□□ -1.73
Trim56Q80VI1 Gm21893-201ENSMUST00000179119 397 ntBASIC4.23□□□□□ -1.73
Trim56Q80VI1 Gm37575-201ENSMUST00000195467 309 ntBASIC4.23□□□□□ -1.73
Trim56Q80VI1 Gm45002-201ENSMUST00000208045 120 ntBASIC4.23□□□□□ -1.73
Trim56Q80VI1 Gm45317-201ENSMUST00000210385 223 ntBASIC4.23□□□□□ -1.73
Trim56Q80VI1 AC159896.1-201ENSMUST00000215264 215 ntBASIC4.23□□□□□ -1.73
Trim56Q80VI1 AC160550.3-201ENSMUST00000226818 400 ntBASIC4.23□□□□□ -1.73
Trim56Q80VI1 Snora7a-201ENSMUST00000082629 140 ntBASIC4.23□□□□□ -1.73
Trim56Q80VI1 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Trim56Q80VI1 AC154677.1-201ENSMUST00000227636 2805 ntBASIC4.23□□□□□ -1.73
Trim56Q80VI1 Gm37792-201ENSMUST00000195761 3413 ntBASIC4.23□□□□□ -1.73
Trim56Q80VI1 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
Trim56Q80VI1 Gm43829-201ENSMUST00000196191 3802 ntBASIC4.23□□□□□ -1.73
Trim56Q80VI1 Olfr1270-206ENSMUST00000217139 4803 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Trim56Q80VI1 Olfr661-202ENSMUST00000214876 3790 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Trim56Q80VI1 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Trim56Q80VI1 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Trim56Q80VI1 Nlrp14-201ENSMUST00000084763 3272 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Trim56Q80VI1 Ugp2-202ENSMUST00000102875 2683 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Trim56Q80VI1 Olfr901-203ENSMUST00000216644 2731 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Trim56Q80VI1 Gm23063-201ENSMUST00000102350 93 ntBASIC4.22□□□□□ -1.73
Trim56Q80VI1 Trav8-1-201ENSMUST00000103643 328 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Trim56Q80VI1 Gm15180-201ENSMUST00000117745 492 ntBASIC4.22□□□□□ -1.73
Trim56Q80VI1 Gm6574-201ENSMUST00000120037 362 ntBASIC4.22□□□□□ -1.73
Trim56Q80VI1 Gm22027-201ENSMUST00000122737 127 ntBASIC4.22□□□□□ -1.73
Trim56Q80VI1 Gm23540-201ENSMUST00000157543 164 ntBASIC4.22□□□□□ -1.73
Trim56Q80VI1 Gm24392-201ENSMUST00000158136 103 ntBASIC4.22□□□□□ -1.73
Trim56Q80VI1 Gm24006-201ENSMUST00000158462 132 ntBASIC4.22□□□□□ -1.73
Trim56Q80VI1 Gm24667-201ENSMUST00000158938 103 ntBASIC4.22□□□□□ -1.73
Trim56Q80VI1 Clec9a-203ENSMUST00000164513 714 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
Trim56Q80VI1 Gm25024-201ENSMUST00000179667 104 ntBASIC4.22□□□□□ -1.73
Trim56Q80VI1 Ptma-ps1-201ENSMUST00000181079 309 ntBASIC4.22□□□□□ -1.73
Trim56Q80VI1 Gm32175-201ENSMUST00000193641 346 ntBASIC4.22□□□□□ -1.73
Trim56Q80VI1 AC154262.1-201ENSMUST00000225976 286 ntBASIC4.22□□□□□ -1.73
Trim56Q80VI1 Hamp-201ENSMUST00000062620 410 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Trim56Q80VI1 Gm24152-201ENSMUST00000082764 163 ntBASIC4.22□□□□□ -1.73
Trim56Q80VI1 Mir101b-201ENSMUST00000083622 97 ntBASIC4.22□□□□□ -1.73
Trim56Q80VI1 Olfr1270-202ENSMUST00000213946 4930 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Trim56Q80VI1 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Trim56Q80VI1 Cbll1-204ENSMUST00000185739 3945 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Trim56Q80VI1 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC4.22□□□□□ -1.73
Trim56Q80VI1 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Trim56Q80VI1 Gm18609-201ENSMUST00000203370 3601 ntBASIC4.21□□□□□ -1.74
Trim56Q80VI1 Olfr1484-202ENSMUST00000208104 3621 ntTSL 2 BASIC4.21□□□□□ -1.74
Trim56Q80VI1 Olfr1484-206ENSMUST00000217451 3628 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Trim56Q80VI1 Gm26145-201ENSMUST00000104476 127 ntBASIC4.21□□□□□ -1.74
Trim56Q80VI1 Gm14593-201ENSMUST00000119948 294 ntBASIC4.21□□□□□ -1.74
Trim56Q80VI1 Gm14649-201ENSMUST00000121814 324 ntBASIC4.21□□□□□ -1.74
Trim56Q80VI1 Gm13667-201ENSMUST00000132332 617 ntTSL 5 BASIC4.21□□□□□ -1.74
Trim56Q80VI1 Gm28020-201ENSMUST00000157739 67 ntBASIC4.21□□□□□ -1.74
Trim56Q80VI1 Gm25863-201ENSMUST00000158249 329 ntBASIC4.21□□□□□ -1.74
Trim56Q80VI1 Gm23702-201ENSMUST00000158840 130 ntBASIC4.21□□□□□ -1.74
Trim56Q80VI1 H2al1k-201ENSMUST00000178196 510 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Trim56Q80VI1 Mir6540-201ENSMUST00000184886 108 ntBASIC4.21□□□□□ -1.74
Trim56Q80VI1 Gm43978-201ENSMUST00000203491 451 ntBASIC4.21□□□□□ -1.74
Trim56Q80VI1 Gm10400-201ENSMUST00000203920 3835 ntBASIC4.21□□□□□ -1.74
Trim56Q80VI1 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Trim56Q80VI1 Gm45245-201ENSMUST00000210082 376 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 79.9 ms