Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
Pcdh19Q80TF3 Olfr810-204ENSMUST00000217283 4527 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Pcdh19Q80TF3 Atad1-201ENSMUST00000070210 2813 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Pcdh19Q80TF3 Chl1-201ENSMUST00000066905 7562 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
Pcdh19Q80TF3 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC4.03□□□□□ -1.76
Pcdh19Q80TF3 Olfr351-202ENSMUST00000213676 3426 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Pcdh19Q80TF3 Mir92b-201ENSMUST00000102300 83 ntBASIC4.03□□□□□ -1.76
Pcdh19Q80TF3 Gm24544-201ENSMUST00000103862 110 ntBASIC4.03□□□□□ -1.76
Pcdh19Q80TF3 Gm22779-201ENSMUST00000104085 107 ntBASIC4.03□□□□□ -1.76
Pcdh19Q80TF3 Gm12793-201ENSMUST00000119268 292 ntBASIC4.03□□□□□ -1.76
Pcdh19Q80TF3 Gm5396-201ENSMUST00000121222 532 ntBASIC4.03□□□□□ -1.76
Pcdh19Q80TF3 Gm14473-201ENSMUST00000122269 557 ntBASIC4.03□□□□□ -1.76
Pcdh19Q80TF3 Gm22957-201ENSMUST00000122511 123 ntBASIC4.03□□□□□ -1.76
Pcdh19Q80TF3 Gm24959-201ENSMUST00000157924 146 ntBASIC4.03□□□□□ -1.76
Pcdh19Q80TF3 Ubl5-209ENSMUST00000161882 489 ntTSL 3 BASIC4.03□□□□□ -1.76
Pcdh19Q80TF3 Gm17103-201ENSMUST00000168897 549 ntTSL 3 BASIC4.03□□□□□ -1.76
Pcdh19Q80TF3 Gm29603-201ENSMUST00000186792 334 ntBASIC4.03□□□□□ -1.76
Pcdh19Q80TF3 Klk1b18-ps-201ENSMUST00000205780 167 ntBASIC4.03□□□□□ -1.76
Pcdh19Q80TF3 Olfr337-ps1-202ENSMUST00000213375 526 ntBASIC4.03□□□□□ -1.76
Pcdh19Q80TF3 AC156560.3-201ENSMUST00000222978 3841 ntBASIC4.03□□□□□ -1.76
Pcdh19Q80TF3 AC164100.1-201ENSMUST00000227214 508 ntBASIC4.03□□□□□ -1.76
Pcdh19Q80TF3 Gm9174-201ENSMUST00000078149 255 ntBASIC4.03□□□□□ -1.76
Pcdh19Q80TF3 Vmn2r90-201ENSMUST00000169805 2592 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.77
Pcdh19Q80TF3 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.77
Pcdh19Q80TF3 Vmn1r80-202ENSMUST00000227205 10892 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Pcdh19Q80TF3 Jrkl-201ENSMUST00000110582 3223 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Pcdh19Q80TF3 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Pcdh19Q80TF3 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Pcdh19Q80TF3 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Pcdh19Q80TF3 Gm37211-201ENSMUST00000193392 3433 ntBASIC4.02□□□□□ -1.77
Pcdh19Q80TF3 Gm23782-201ENSMUST00000157939 120 ntBASIC4.02□□□□□ -1.77
Pcdh19Q80TF3 Clec9a-203ENSMUST00000164513 714 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
Pcdh19Q80TF3 Gm25999-201ENSMUST00000175398 133 ntBASIC4.02□□□□□ -1.77
Pcdh19Q80TF3 Gm24799-201ENSMUST00000178431 79 ntBASIC4.02□□□□□ -1.77
Pcdh19Q80TF3 Mir21b-201ENSMUST00000184317 108 ntBASIC4.02□□□□□ -1.77
Pcdh19Q80TF3 Gm29574-201ENSMUST00000186226 696 ntBASIC4.02□□□□□ -1.77
Pcdh19Q80TF3 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC4.02□□□□□ -1.77
Pcdh19Q80TF3 Gm28650-201ENSMUST00000188413 411 ntBASIC4.02□□□□□ -1.77
Pcdh19Q80TF3 Gm42451-201ENSMUST00000197410 244 ntBASIC4.02□□□□□ -1.77
Pcdh19Q80TF3 Gm44563-201ENSMUST00000207958 178 ntBASIC4.02□□□□□ -1.77
Pcdh19Q80TF3 Gm45539-201ENSMUST00000210313 428 ntBASIC4.02□□□□□ -1.77
Pcdh19Q80TF3 Hamp-201ENSMUST00000062620 410 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Pcdh19Q80TF3 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Pcdh19Q80TF3 Olfr681-201ENSMUST00000098157 948 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Pcdh19Q80TF3 Olfr263-202ENSMUST00000215804 3963 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Pcdh19Q80TF3 Syne2-201ENSMUST00000044217 21690 ntAPPRIS P2 TSL 5 BASIC4.02□□□□□ -1.77
Pcdh19Q80TF3 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Pcdh19Q80TF3 AC156025.1-201ENSMUST00000223597 3551 ntBASIC4.02□□□□□ -1.77
Pcdh19Q80TF3 Olfr599-202ENSMUST00000214329 2183 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Pcdh19Q80TF3 Olfr1277-202ENSMUST00000214760 5944 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Pcdh19Q80TF3 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
Pcdh19Q80TF3 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Pcdh19Q80TF3 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Pcdh19Q80TF3 Gm21940-201ENSMUST00000204940 2278 ntBASIC4.01□□□□□ -1.77
Pcdh19Q80TF3 Gm23271-201ENSMUST00000104052 124 ntBASIC4.01□□□□□ -1.77
Pcdh19Q80TF3 Gm22215-201ENSMUST00000157558 96 ntBASIC4.01□□□□□ -1.77
Pcdh19Q80TF3 Gm7241-201ENSMUST00000159853 357 ntBASIC4.01□□□□□ -1.77
Pcdh19Q80TF3 Rhoay-ps3-201ENSMUST00000187648 576 ntBASIC4.01□□□□□ -1.77
Pcdh19Q80TF3 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC4.01□□□□□ -1.77
Pcdh19Q80TF3 Gm37898-201ENSMUST00000193781 174 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Pcdh19Q80TF3 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Pcdh19Q80TF3 Gm44009-201ENSMUST00000203539 521 ntTSL 5 BASIC4.01□□□□□ -1.77
Pcdh19Q80TF3 AC154374.1-201ENSMUST00000215351 351 ntBASIC4.01□□□□□ -1.77
Pcdh19Q80TF3 Gm15292-201ENSMUST00000098895 385 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Pcdh19Q80TF3 Fam46d-204ENSMUST00000167154 3004 ntAPPRIS P1 TSL 3 BASIC4□□□□□ -1.77
Pcdh19Q80TF3 Gm43829-201ENSMUST00000196191 3802 ntBASIC4□□□□□ -1.77
Pcdh19Q80TF3 Eya4-208ENSMUST00000220299 3615 ntTSL 1 (best) BASIC4□□□□□ -1.77
Pcdh19Q80TF3 Agtr2-201ENSMUST00000089188 3283 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Pcdh19Q80TF3 Olfr1255-202ENSMUST00000214508 2253 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Pcdh19Q80TF3 Zfp595-201ENSMUST00000109735 3896 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
Pcdh19Q80TF3 Olfr735-202ENSMUST00000216634 3860 ntAPPRIS ALT2 TSL 3 BASIC4□□□□□ -1.77
Pcdh19Q80TF3 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Pcdh19Q80TF3 Gm14073-201ENSMUST00000117344 381 ntBASIC4□□□□□ -1.77
Pcdh19Q80TF3 Tmc4-ps-201ENSMUST00000117819 258 ntBASIC4□□□□□ -1.77
Pcdh19Q80TF3 Gm12304-201ENSMUST00000120312 385 ntBASIC4□□□□□ -1.77
Pcdh19Q80TF3 Gm11645-201ENSMUST00000121589 649 ntBASIC4□□□□□ -1.77
Pcdh19Q80TF3 Gm23713-201ENSMUST00000157353 70 ntBASIC4□□□□□ -1.77
Pcdh19Q80TF3 Gm22615-201ENSMUST00000158102 70 ntBASIC4□□□□□ -1.77
Pcdh19Q80TF3 Gm22531-201ENSMUST00000158819 140 ntBASIC4□□□□□ -1.77
Pcdh19Q80TF3 Gm23702-201ENSMUST00000158840 130 ntBASIC4□□□□□ -1.77
Pcdh19Q80TF3 Gm22367-201ENSMUST00000178930 132 ntBASIC4□□□□□ -1.77
Pcdh19Q80TF3 Gm29097-201ENSMUST00000190273 422 ntBASIC4□□□□□ -1.77
Pcdh19Q80TF3 Gm28267-201ENSMUST00000191093 265 ntBASIC4□□□□□ -1.77
Pcdh19Q80TF3 Gm43236-201ENSMUST00000197414 313 ntTSL 5 BASIC4□□□□□ -1.77
Pcdh19Q80TF3 Gm4644-201ENSMUST00000197587 400 ntBASIC4□□□□□ -1.77
Pcdh19Q80TF3 Gm18502-201ENSMUST00000218679 199 ntBASIC4□□□□□ -1.77
Pcdh19Q80TF3 Gm40810-201ENSMUST00000219149 253 ntBASIC4□□□□□ -1.77
Pcdh19Q80TF3 AC140344.1-201ENSMUST00000223384 387 ntBASIC4□□□□□ -1.77
Pcdh19Q80TF3 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC4□□□□□ -1.77
Pcdh19Q80TF3 Gm22620-201ENSMUST00000082700 133 ntBASIC4□□□□□ -1.77
Pcdh19Q80TF3 Mir215-201ENSMUST00000083628 112 ntBASIC4□□□□□ -1.77
Pcdh19Q80TF3 Polk-202ENSMUST00000091387 2382 ntTSL 1 (best) BASIC4□□□□□ -1.77
Pcdh19Q80TF3 Gm9921-201ENSMUST00000173293 4399 ntTSL 1 (best) BASIC4□□□□□ -1.77
Pcdh19Q80TF3 Cyp3a25-201ENSMUST00000068317 2000 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Pcdh19Q80TF3 AC117226.1-201ENSMUST00000221635 3737 ntBASIC3.99□□□□□ -1.77
Pcdh19Q80TF3 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Pcdh19Q80TF3 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Pcdh19Q80TF3 Olfr706-202ENSMUST00000213918 4828 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Pcdh19Q80TF3 Gm14416-201ENSMUST00000118630 2308 ntBASIC3.99□□□□□ -1.77
Pcdh19Q80TF3 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 94.6 ms