Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 Mir10a-201ENSMUST00000083585 110 ntBASIC3.97□□□□□ -1.77
Rnf180Q3U827 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
Rnf180Q3U827 Gm43658-201ENSMUST00000202348 4176 ntBASIC3.97□□□□□ -1.77
Rnf180Q3U827 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Rnf180Q3U827 Gm15936-201ENSMUST00000118706 460 ntBASIC3.96□□□□□ -1.78
Rnf180Q3U827 Gm13314-201ENSMUST00000118742 335 ntBASIC3.96□□□□□ -1.78
Rnf180Q3U827 Gm13396-201ENSMUST00000120617 271 ntBASIC3.96□□□□□ -1.78
Rnf180Q3U827 Gm22328-201ENSMUST00000158074 112 ntBASIC3.96□□□□□ -1.78
Rnf180Q3U827 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Rnf180Q3U827 Gm24085-201ENSMUST00000175172 116 ntBASIC3.96□□□□□ -1.78
Rnf180Q3U827 Gm28263-201ENSMUST00000185884 400 ntBASIC3.96□□□□□ -1.78
Rnf180Q3U827 Gm42647-201ENSMUST00000195939 459 ntBASIC3.96□□□□□ -1.78
Rnf180Q3U827 Gm44844-201ENSMUST00000207242 336 ntBASIC3.96□□□□□ -1.78
Rnf180Q3U827 Gm45317-201ENSMUST00000210385 223 ntBASIC3.96□□□□□ -1.78
Rnf180Q3U827 Gm10025-201ENSMUST00000079568 372 ntBASIC3.96□□□□□ -1.78
Rnf180Q3U827 Gm26449-201ENSMUST00000082452 104 ntBASIC3.96□□□□□ -1.78
Rnf180Q3U827 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.78
Rnf180Q3U827 Olfr68-202ENSMUST00000216811 4093 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Rnf180Q3U827 Gm8995-201ENSMUST00000184842 7280 ntBASIC3.96□□□□□ -1.78
Rnf180Q3U827 Olfr392-201ENSMUST00000118463 3643 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
Rnf180Q3U827 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Rnf180Q3U827 Cdh19-201ENSMUST00000094626 3914 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Rnf180Q3U827 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Rnf180Q3U827 Zfp595-203ENSMUST00000168892 4040 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
Rnf180Q3U827 Olfr728-202ENSMUST00000213685 7087 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Rnf180Q3U827 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC3.95□□□□□ -1.78
Rnf180Q3U827 Vmn1r172-201ENSMUST00000038694 9009 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Rnf180Q3U827 Gm23951-201ENSMUST00000104029 132 ntBASIC3.95□□□□□ -1.78
Rnf180Q3U827 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Rnf180Q3U827 Gm15223-201ENSMUST00000120989 826 ntBASIC3.95□□□□□ -1.78
Rnf180Q3U827 Gm12785-201ENSMUST00000122052 172 ntBASIC3.95□□□□□ -1.78
Rnf180Q3U827 Gm22957-201ENSMUST00000122511 123 ntBASIC3.95□□□□□ -1.78
Rnf180Q3U827 n-R5s216-201ENSMUST00000122755 112 ntBASIC3.95□□□□□ -1.78
Rnf180Q3U827 Gm23234-201ENSMUST00000157304 134 ntBASIC3.95□□□□□ -1.78
Rnf180Q3U827 Gm22516-201ENSMUST00000158266 124 ntBASIC3.95□□□□□ -1.78
Rnf180Q3U827 Gm22521-201ENSMUST00000158272 134 ntBASIC3.95□□□□□ -1.78
Rnf180Q3U827 Gm25486-201ENSMUST00000158726 63 ntBASIC3.95□□□□□ -1.78
Rnf180Q3U827 Gm23268-201ENSMUST00000175494 78 ntBASIC3.95□□□□□ -1.78
Rnf180Q3U827 Gm23141-201ENSMUST00000178682 94 ntBASIC3.95□□□□□ -1.78
Rnf180Q3U827 Gm27959-201ENSMUST00000185172 111 ntBASIC3.95□□□□□ -1.78
Rnf180Q3U827 Gm28755-201ENSMUST00000185773 199 ntBASIC3.95□□□□□ -1.78
Rnf180Q3U827 Gm7329-201ENSMUST00000185915 210 ntBASIC3.95□□□□□ -1.78
Rnf180Q3U827 Gm2719-201ENSMUST00000191929 444 ntBASIC3.95□□□□□ -1.78
Rnf180Q3U827 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC3.95□□□□□ -1.78
Rnf180Q3U827 Gm44030-201ENSMUST00000204865 432 ntBASIC3.95□□□□□ -1.78
Rnf180Q3U827 Vmn2r-ps50-201ENSMUST00000209317 120 ntBASIC3.95□□□□□ -1.78
Rnf180Q3U827 Gm45403-201ENSMUST00000209453 276 ntBASIC3.95□□□□□ -1.78
Rnf180Q3U827 AC153948.1-201ENSMUST00000219080 3838 ntBASIC3.95□□□□□ -1.78
Rnf180Q3U827 Mir496a-201ENSMUST00000093627 79 ntBASIC3.95□□□□□ -1.78
Rnf180Q3U827 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Rnf180Q3U827 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Rnf180Q3U827 Ptprz1-201ENSMUST00000090568 8068 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
Rnf180Q3U827 Gm10484-201ENSMUST00000196372 4759 ntBASIC3.94□□□□□ -1.78
Rnf180Q3U827 D3Ertd254e-201ENSMUST00000165956 6503 ntTSL 3 BASIC3.94□□□□□ -1.78
Rnf180Q3U827 Vmn1r43-205ENSMUST00000228709 12646 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Rnf180Q3U827 Mmrn1-203ENSMUST00000204333 4472 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
Rnf180Q3U827 AC132237.1-201ENSMUST00000220950 4475 ntBASIC3.94□□□□□ -1.78
Rnf180Q3U827 Gm23941-201ENSMUST00000101953 107 ntBASIC3.94□□□□□ -1.78
Rnf180Q3U827 Gm14296-202ENSMUST00000108931 750 ntBASIC3.94□□□□□ -1.78
Rnf180Q3U827 Gm27926-201ENSMUST00000157180 66 ntBASIC3.94□□□□□ -1.78
Rnf180Q3U827 Gm23752-201ENSMUST00000157584 115 ntBASIC3.94□□□□□ -1.78
Rnf180Q3U827 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC3.94□□□□□ -1.78
Rnf180Q3U827 Mir3075-201ENSMUST00000175340 85 ntBASIC3.94□□□□□ -1.78
Rnf180Q3U827 Gm26426-201ENSMUST00000177866 123 ntBASIC3.94□□□□□ -1.78
Rnf180Q3U827 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Rnf180Q3U827 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Rnf180Q3U827 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Rnf180Q3U827 Gm17522-201ENSMUST00000178144 498 ntBASIC3.94□□□□□ -1.78
Rnf180Q3U827 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Rnf180Q3U827 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Rnf180Q3U827 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Rnf180Q3U827 Gm26060-201ENSMUST00000180094 123 ntBASIC3.94□□□□□ -1.78
Rnf180Q3U827 Gm27893-201ENSMUST00000184408 194 ntBASIC3.94□□□□□ -1.78
Rnf180Q3U827 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Rnf180Q3U827 Gm45207-201ENSMUST00000207469 145 ntBASIC3.94□□□□□ -1.78
Rnf180Q3U827 AC165092.3-201ENSMUST00000223602 282 ntBASIC3.94□□□□□ -1.78
Rnf180Q3U827 AC133156.1-202ENSMUST00000227284 363 ntBASIC3.94□□□□□ -1.78
Rnf180Q3U827 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Rnf180Q3U827 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
Rnf180Q3U827 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Rnf180Q3U827 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Rnf180Q3U827 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
Rnf180Q3U827 Dst-203ENSMUST00000115104 23279 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
Rnf180Q3U827 Gm18337-201ENSMUST00000219023 5762 ntBASIC3.93□□□□□ -1.78
Rnf180Q3U827 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Rnf180Q3U827 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
Rnf180Q3U827 Olfr901-203ENSMUST00000216644 2731 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Rnf180Q3U827 Mir291a-201ENSMUST00000104815 82 ntBASIC3.93□□□□□ -1.78
Rnf180Q3U827 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Rnf180Q3U827 Gm16171-201ENSMUST00000118004 324 ntBASIC3.93□□□□□ -1.78
Rnf180Q3U827 Gm15244-201ENSMUST00000121122 130 ntBASIC3.93□□□□□ -1.78
Rnf180Q3U827 Gm24839-201ENSMUST00000122602 107 ntBASIC3.93□□□□□ -1.78
Rnf180Q3U827 Gm25153-201ENSMUST00000157118 156 ntBASIC3.93□□□□□ -1.78
Rnf180Q3U827 Gm25391-201ENSMUST00000157342 134 ntBASIC3.93□□□□□ -1.78
Rnf180Q3U827 Gm22722-201ENSMUST00000157467 132 ntBASIC3.93□□□□□ -1.78
Rnf180Q3U827 Gm22833-201ENSMUST00000158292 132 ntBASIC3.93□□□□□ -1.78
Rnf180Q3U827 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Rnf180Q3U827 Gm28534-201ENSMUST00000187744 676 ntBASIC3.93□□□□□ -1.78
Rnf180Q3U827 Gm28650-201ENSMUST00000188413 411 ntBASIC3.93□□□□□ -1.78
Rnf180Q3U827 Gm42526-201ENSMUST00000198956 393 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms