Protein–RNA interactions for Protein: P82347

Sgcd, Delta-sarcoglycan, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcdP82347 Gm6788-201ENSMUST00000166459 270 ntBASIC2.57□□□□□ -2
SgcdP82347 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC2.57□□□□□ -2
SgcdP82347 Gm24813-201ENSMUST00000175310 84 ntBASIC2.57□□□□□ -2
SgcdP82347 Olfr1187-ps1-201ENSMUST00000177576 334 ntBASIC2.57□□□□□ -2
SgcdP82347 Gm23186-201ENSMUST00000180078 107 ntBASIC2.57□□□□□ -2
SgcdP82347 Gm33354-201ENSMUST00000195448 906 ntBASIC2.57□□□□□ -2
SgcdP82347 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC2.57□□□□□ -2
SgcdP82347 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC2.57□□□□□ -2
SgcdP82347 Gm45445-201ENSMUST00000209586 232 ntBASIC2.57□□□□□ -2
SgcdP82347 Gm18000-201ENSMUST00000212153 800 ntBASIC2.57□□□□□ -2
SgcdP82347 CT485612.4-201ENSMUST00000223405 250 ntBASIC2.57□□□□□ -2
SgcdP82347 Gm30155-201ENSMUST00000223458 339 ntBASIC2.57□□□□□ -2
SgcdP82347 Gm6030-201ENSMUST00000078768 402 ntBASIC2.57□□□□□ -2
SgcdP82347 Gm23727-201ENSMUST00000083352 164 ntBASIC2.57□□□□□ -2
SgcdP82347 Gm23247-201ENSMUST00000083373 107 ntBASIC2.57□□□□□ -2
SgcdP82347 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
SgcdP82347 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC2.57□□□□□ -2
SgcdP82347 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
SgcdP82347 Gm13331-201ENSMUST00000117500 448 ntBASIC2.56□□□□□ -2
SgcdP82347 Gm14897-201ENSMUST00000118213 207 ntBASIC2.56□□□□□ -2
SgcdP82347 Gm23752-201ENSMUST00000157584 115 ntBASIC2.56□□□□□ -2
SgcdP82347 Gm22187-201ENSMUST00000157819 129 ntBASIC2.56□□□□□ -2
SgcdP82347 Snord53-201ENSMUST00000175146 78 ntBASIC2.56□□□□□ -2
SgcdP82347 Gm23268-201ENSMUST00000175494 78 ntBASIC2.56□□□□□ -2
SgcdP82347 Gm23933-201ENSMUST00000178405 79 ntBASIC2.56□□□□□ -2
SgcdP82347 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC2.56□□□□□ -2
SgcdP82347 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC2.56□□□□□ -2
SgcdP82347 Gm27505-201ENSMUST00000185071 110 ntBASIC2.56□□□□□ -2
SgcdP82347 Gm6059-201ENSMUST00000196903 340 ntBASIC2.56□□□□□ -2
SgcdP82347 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC2.56□□□□□ -2
SgcdP82347 Gm42739-201ENSMUST00000200687 226 ntBASIC2.56□□□□□ -2
SgcdP82347 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC2.56□□□□□ -2
SgcdP82347 Gm42445-201ENSMUST00000196996 2893 ntBASIC2.56□□□□□ -2
SgcdP82347 AC122887.2-201ENSMUST00000219465 1603 ntBASIC2.56□□□□□ -2
SgcdP82347 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.55□□□□□ -2
SgcdP82347 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC2.55□□□□□ -2
SgcdP82347 Gm12255-201ENSMUST00000117184 284 ntBASIC2.55□□□□□ -2
SgcdP82347 Gm15896-201ENSMUST00000118045 440 ntBASIC2.55□□□□□ -2
SgcdP82347 Gm14906-201ENSMUST00000119265 390 ntBASIC2.55□□□□□ -2
SgcdP82347 Gm11363-201ENSMUST00000121672 548 ntBASIC2.55□□□□□ -2
SgcdP82347 Gm13409-201ENSMUST00000122072 546 ntBASIC2.55□□□□□ -2
SgcdP82347 Gm23184-201ENSMUST00000122594 131 ntBASIC2.55□□□□□ -2
SgcdP82347 Gm2830-201ENSMUST00000140330 385 ntBASIC2.55□□□□□ -2
SgcdP82347 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC2.55□□□□□ -2
SgcdP82347 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC2.55□□□□□ -2
SgcdP82347 Gm23713-201ENSMUST00000157353 70 ntBASIC2.55□□□□□ -2
SgcdP82347 Gm23325-201ENSMUST00000157422 129 ntBASIC2.55□□□□□ -2
SgcdP82347 Gm22615-201ENSMUST00000158102 70 ntBASIC2.55□□□□□ -2
SgcdP82347 Gm24885-201ENSMUST00000158783 270 ntBASIC2.55□□□□□ -2
SgcdP82347 Gm17148-201ENSMUST00000164702 249 ntBASIC2.55□□□□□ -2
SgcdP82347 Gm29231-201ENSMUST00000179850 319 ntBASIC2.55□□□□□ -2
SgcdP82347 Gm43431-201ENSMUST00000198577 340 ntBASIC2.55□□□□□ -2
SgcdP82347 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC2.55□□□□□ -2
SgcdP82347 Gm42801-201ENSMUST00000202562 2865 ntBASIC2.55□□□□□ -2
SgcdP82347 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC2.55□□□□□ -2
SgcdP82347 Gm44519-201ENSMUST00000206486 122 ntBASIC2.55□□□□□ -2
SgcdP82347 Gm44680-201ENSMUST00000208414 2910 ntBASIC2.55□□□□□ -2
SgcdP82347 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC2.55□□□□□ -2
SgcdP82347 AC163357.1-201ENSMUST00000220847 233 ntBASIC2.55□□□□□ -2
SgcdP82347 Gm20102-201ENSMUST00000222445 220 ntBASIC2.55□□□□□ -2
SgcdP82347 AC125350.4-201ENSMUST00000225895 273 ntBASIC2.55□□□□□ -2
SgcdP82347 AC130477.2-201ENSMUST00000228158 274 ntBASIC2.55□□□□□ -2
SgcdP82347 n-R5s40-201ENSMUST00000082475 124 ntBASIC2.55□□□□□ -2
SgcdP82347 Olfr837-202ENSMUST00000215699 3758 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
SgcdP82347 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC2.54□□□□□ -2
SgcdP82347 Olfr1111-202ENSMUST00000214492 1616 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
SgcdP82347 Gm22779-201ENSMUST00000104085 107 ntBASIC2.54□□□□□ -2
SgcdP82347 Gm22674-201ENSMUST00000104413 131 ntBASIC2.54□□□□□ -2
SgcdP82347 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SgcdP82347 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC2.54□□□□□ -2
SgcdP82347 Gm13876-201ENSMUST00000118451 261 ntBASIC2.54□□□□□ -2
SgcdP82347 Gm14551-201ENSMUST00000120802 256 ntBASIC2.54□□□□□ -2
SgcdP82347 Gm14821-201ENSMUST00000121975 435 ntBASIC2.54□□□□□ -2
SgcdP82347 Gm24596-201ENSMUST00000122504 107 ntBASIC2.54□□□□□ -2
SgcdP82347 Gm22322-201ENSMUST00000157151 111 ntBASIC2.54□□□□□ -2
SgcdP82347 Mir1942-201ENSMUST00000157274 63 ntBASIC2.54□□□□□ -2
SgcdP82347 Gm24436-201ENSMUST00000157889 302 ntBASIC2.54□□□□□ -2
SgcdP82347 Gm24584-201ENSMUST00000157972 107 ntBASIC2.54□□□□□ -2
SgcdP82347 Gm25335-201ENSMUST00000158043 103 ntBASIC2.54□□□□□ -2
SgcdP82347 Gm24577-201ENSMUST00000158580 63 ntBASIC2.54□□□□□ -2
SgcdP82347 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC2.54□□□□□ -2
SgcdP82347 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC2.54□□□□□ -2
SgcdP82347 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC2.54□□□□□ -2
SgcdP82347 Gm21842-201ENSMUST00000177552 498 ntBASIC2.54□□□□□ -2
SgcdP82347 Gm25211-201ENSMUST00000177553 107 ntBASIC2.54□□□□□ -2
SgcdP82347 Gm24540-201ENSMUST00000177627 107 ntBASIC2.54□□□□□ -2
SgcdP82347 Gm25256-201ENSMUST00000177746 107 ntBASIC2.54□□□□□ -2
SgcdP82347 Gm21626-201ENSMUST00000177791 498 ntBASIC2.54□□□□□ -2
SgcdP82347 Gm21562-201ENSMUST00000177888 498 ntBASIC2.54□□□□□ -2
SgcdP82347 Gm21539-201ENSMUST00000177925 498 ntBASIC2.54□□□□□ -2
SgcdP82347 Gm22822-201ENSMUST00000177941 107 ntBASIC2.54□□□□□ -2
SgcdP82347 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC2.54□□□□□ -2
SgcdP82347 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC2.54□□□□□ -2
SgcdP82347 Rnu6-201ENSMUST00000178023 107 ntBASIC2.54□□□□□ -2
SgcdP82347 Gm23151-201ENSMUST00000178061 107 ntBASIC2.54□□□□□ -2
SgcdP82347 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC2.54□□□□□ -2
SgcdP82347 Gm25245-201ENSMUST00000178139 107 ntBASIC2.54□□□□□ -2
SgcdP82347 Gm17522-201ENSMUST00000178144 498 ntBASIC2.54□□□□□ -2
SgcdP82347 Gm24753-201ENSMUST00000178183 107 ntBASIC2.54□□□□□ -2
SgcdP82347 Gm21599-201ENSMUST00000178249 498 ntBASIC2.54□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 85.2 ms