Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Gm7953-201ENSMUST00000168278 469 ntBASIC1.09□□□□□ -2.23
Trav6-6A0A075B603 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC1.09□□□□□ -2.23
Trav6-6A0A075B603 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC1.09□□□□□ -2.23
Trav6-6A0A075B603 Gm29231-201ENSMUST00000179850 319 ntBASIC1.09□□□□□ -2.23
Trav6-6A0A075B603 Gm27676-201ENSMUST00000183669 61 ntBASIC1.09□□□□□ -2.23
Trav6-6A0A075B603 Mir6917-201ENSMUST00000184111 61 ntBASIC1.09□□□□□ -2.23
Trav6-6A0A075B603 Gm27428-201ENSMUST00000184289 110 ntBASIC1.09□□□□□ -2.23
Trav6-6A0A075B603 Gm29550-201ENSMUST00000185543 285 ntBASIC1.09□□□□□ -2.23
Trav6-6A0A075B603 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
Trav6-6A0A075B603 Gm43493-201ENSMUST00000199837 202 ntBASIC1.09□□□□□ -2.23
Trav6-6A0A075B603 Gm44384-201ENSMUST00000200208 114 ntBASIC1.09□□□□□ -2.23
Trav6-6A0A075B603 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC1.09□□□□□ -2.23
Trav6-6A0A075B603 Gm45730-201ENSMUST00000212560 395 ntBASIC1.09□□□□□ -2.23
Trav6-6A0A075B603 Gm7984-201ENSMUST00000060640 538 ntBASIC1.09□□□□□ -2.23
Trav6-6A0A075B603 Olfr1454-201ENSMUST00000073732 924 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
Trav6-6A0A075B603 Gm24805-201ENSMUST00000082931 104 ntBASIC1.09□□□□□ -2.23
Trav6-6A0A075B603 Gm23246-201ENSMUST00000083371 67 ntBASIC1.09□□□□□ -2.23
Trav6-6A0A075B603 Mir148b-201ENSMUST00000083626 97 ntBASIC1.09□□□□□ -2.23
Trav6-6A0A075B603 Gm23733-201ENSMUST00000083750 106 ntBASIC1.09□□□□□ -2.23
Trav6-6A0A075B603 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
Trav6-6A0A075B603 Gm10778-201ENSMUST00000105315 1497 ntTSL 5 BASIC1.08□□□□□ -2.24
Trav6-6A0A075B603 Gm4767-201ENSMUST00000099439 1497 ntTSL 5 BASIC1.08□□□□□ -2.24
Trav6-6A0A075B603 Gm14835-201ENSMUST00000119039 315 ntBASIC1.08□□□□□ -2.24
Trav6-6A0A075B603 Gm13903-201ENSMUST00000120945 193 ntBASIC1.08□□□□□ -2.24
Trav6-6A0A075B603 Gm13194-201ENSMUST00000142299 311 ntBASIC1.08□□□□□ -2.24
Trav6-6A0A075B603 Gm22885-201ENSMUST00000157410 107 ntBASIC1.08□□□□□ -2.24
Trav6-6A0A075B603 Gm23381-201ENSMUST00000157676 94 ntBASIC1.08□□□□□ -2.24
Trav6-6A0A075B603 Gm24960-201ENSMUST00000157923 90 ntBASIC1.08□□□□□ -2.24
Trav6-6A0A075B603 Gm22316-201ENSMUST00000158012 216 ntBASIC1.08□□□□□ -2.24
Trav6-6A0A075B603 Gm22803-201ENSMUST00000158049 283 ntBASIC1.08□□□□□ -2.24
Trav6-6A0A075B603 Gm16043-201ENSMUST00000160030 616 ntTSL 3 BASIC1.08□□□□□ -2.24
Trav6-6A0A075B603 Gm17038-201ENSMUST00000166586 494 ntBASIC1.08□□□□□ -2.24
Trav6-6A0A075B603 Mir3103-201ENSMUST00000175474 67 ntBASIC1.08□□□□□ -2.24
Trav6-6A0A075B603 Gm6660-201ENSMUST00000179149 468 ntBASIC1.08□□□□□ -2.24
Trav6-6A0A075B603 Gm28453-203ENSMUST00000187041 189 ntBASIC1.08□□□□□ -2.24
Trav6-6A0A075B603 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC1.08□□□□□ -2.24
Trav6-6A0A075B603 Gm29600-201ENSMUST00000188687 377 ntBASIC1.08□□□□□ -2.24
Trav6-6A0A075B603 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC1.08□□□□□ -2.24
Trav6-6A0A075B603 Gm42807-201ENSMUST00000200141 329 ntBASIC1.08□□□□□ -2.24
Trav6-6A0A075B603 Gm44961-201ENSMUST00000207450 196 ntBASIC1.08□□□□□ -2.24
Trav6-6A0A075B603 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC1.08□□□□□ -2.24
Trav6-6A0A075B603 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC1.08□□□□□ -2.24
Trav6-6A0A075B603 Gm19709-201ENSMUST00000215403 482 ntBASIC1.08□□□□□ -2.24
Trav6-6A0A075B603 AC135292.1-201ENSMUST00000227665 204 ntBASIC1.08□□□□□ -2.24
Trav6-6A0A075B603 Gm26166-201ENSMUST00000083788 107 ntBASIC1.08□□□□□ -2.24
Trav6-6A0A075B603 Gm10360-201ENSMUST00000097219 272 ntBASIC1.08□□□□□ -2.24
Trav6-6A0A075B603 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
Trav6-6A0A075B603 Gm14445-201ENSMUST00000117051 1484 ntBASIC1.07□□□□□ -2.24
Trav6-6A0A075B603 Gm22761-201ENSMUST00000102278 96 ntBASIC1.07□□□□□ -2.24
Trav6-6A0A075B603 Gm22936-201ENSMUST00000103955 126 ntBASIC1.07□□□□□ -2.24
Trav6-6A0A075B603 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC1.07□□□□□ -2.24
Trav6-6A0A075B603 4933411O13Rik-202ENSMUST00000140815 370 ntTSL 3 BASIC1.07□□□□□ -2.24
Trav6-6A0A075B603 Gm14167-201ENSMUST00000148705 433 ntTSL 3 BASIC1.07□□□□□ -2.24
Trav6-6A0A075B603 Gm22217-201ENSMUST00000157556 313 ntBASIC1.07□□□□□ -2.24
Trav6-6A0A075B603 Gm22339-201ENSMUST00000157718 62 ntBASIC1.07□□□□□ -2.24
Trav6-6A0A075B603 Gm25836-201ENSMUST00000158918 123 ntBASIC1.07□□□□□ -2.24
Trav6-6A0A075B603 Gm27878-201ENSMUST00000184000 106 ntBASIC1.07□□□□□ -2.24
Trav6-6A0A075B603 Mir6399-201ENSMUST00000184050 84 ntBASIC1.07□□□□□ -2.24
Trav6-6A0A075B603 Gm27942-201ENSMUST00000184669 101 ntBASIC1.07□□□□□ -2.24
Trav6-6A0A075B603 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC1.07□□□□□ -2.24
Trav6-6A0A075B603 Gm28466-201ENSMUST00000190678 659 ntBASIC1.07□□□□□ -2.24
Trav6-6A0A075B603 Gm42947-201ENSMUST00000198230 675 ntTSL 2 BASIC1.07□□□□□ -2.24
Trav6-6A0A075B603 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC1.07□□□□□ -2.24
Trav6-6A0A075B603 Gm43232-201ENSMUST00000201346 364 ntBASIC1.07□□□□□ -2.24
Trav6-6A0A075B603 Gm43026-201ENSMUST00000202972 325 ntBASIC1.07□□□□□ -2.24
Trav6-6A0A075B603 Gm45101-201ENSMUST00000208327 232 ntBASIC1.07□□□□□ -2.24
Trav6-6A0A075B603 Gm45344-201ENSMUST00000211610 341 ntBASIC1.07□□□□□ -2.24
Trav6-6A0A075B603 1700014L14Rik-201ENSMUST00000211704 481 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
Trav6-6A0A075B603 Gm18488-201ENSMUST00000215082 364 ntBASIC1.07□□□□□ -2.24
Trav6-6A0A075B603 Gm9068-201ENSMUST00000217393 455 ntBASIC1.07□□□□□ -2.24
Trav6-6A0A075B603 Gm46312-201ENSMUST00000220961 420 ntBASIC1.07□□□□□ -2.24
Trav6-6A0A075B603 AC134601.3-201ENSMUST00000221682 154 ntBASIC1.07□□□□□ -2.24
Trav6-6A0A075B603 Olfr575-201ENSMUST00000084812 957 ntBASIC1.07□□□□□ -2.24
Trav6-6A0A075B603 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
Trav6-6A0A075B603 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
Trav6-6A0A075B603 Zfp640-202ENSMUST00000224116 1562 ntBASIC1.07□□□□□ -2.24
Trav6-6A0A075B603 Gm44562-201ENSMUST00000207194 1347 ntBASIC1.07□□□□□ -2.24
Trav6-6A0A075B603 Gm3563-201ENSMUST00000172963 1628 ntBASIC1.07□□□□□ -2.24
Trav6-6A0A075B603 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
Trav6-6A0A075B603 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
Trav6-6A0A075B603 Gm42862-201ENSMUST00000197494 2621 ntBASIC1.06□□□□□ -2.24
Trav6-6A0A075B603 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
Trav6-6A0A075B603 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
Trav6-6A0A075B603 Gm37661-201ENSMUST00000191863 1550 ntBASIC1.06□□□□□ -2.24
Trav6-6A0A075B603 Gm13439-201ENSMUST00000117541 409 ntBASIC1.06□□□□□ -2.24
Trav6-6A0A075B603 Gm11845-201ENSMUST00000117886 327 ntBASIC1.06□□□□□ -2.24
Trav6-6A0A075B603 Gm15211-201ENSMUST00000118932 528 ntBASIC1.06□□□□□ -2.24
Trav6-6A0A075B603 Gm11359-201ENSMUST00000120039 567 ntBASIC1.06□□□□□ -2.24
Trav6-6A0A075B603 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC1.06□□□□□ -2.24
Trav6-6A0A075B603 Gm26414-201ENSMUST00000157674 269 ntBASIC1.06□□□□□ -2.24
Trav6-6A0A075B603 Gm22315-201ENSMUST00000158010 143 ntBASIC1.06□□□□□ -2.24
Trav6-6A0A075B603 Gm16162-201ENSMUST00000162296 297 ntBASIC1.06□□□□□ -2.24
Trav6-6A0A075B603 Gm27245-201ENSMUST00000184385 376 ntBASIC1.06□□□□□ -2.24
Trav6-6A0A075B603 Gm37054-201ENSMUST00000193481 543 ntBASIC1.06□□□□□ -2.24
Trav6-6A0A075B603 Gm42647-201ENSMUST00000195939 459 ntBASIC1.06□□□□□ -2.24
Trav6-6A0A075B603 Gm44483-201ENSMUST00000197203 97 ntBASIC1.06□□□□□ -2.24
Trav6-6A0A075B603 Gm43512-201ENSMUST00000198495 176 ntBASIC1.06□□□□□ -2.24
Trav6-6A0A075B603 AC158388.1-201ENSMUST00000225441 256 ntBASIC1.06□□□□□ -2.24
Trav6-6A0A075B603 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.06□□□□□ -2.24
Trav6-6A0A075B603 Prl8a9-201ENSMUST00000006662 942 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms