Protein–RNA interactions for Protein: Q9CWM4

Pfdn1, Prefoldin subunit 1, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn1Q9CWM4 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC0.86□□□□□ -2.27
Pfdn1Q9CWM4 Gm25888-201ENSMUST00000157778 302 ntBASIC0.86□□□□□ -2.27
Pfdn1Q9CWM4 Spink10-206ENSMUST00000162511 684 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
Pfdn1Q9CWM4 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC0.86□□□□□ -2.27
Pfdn1Q9CWM4 Gm21171-201ENSMUST00000180048 673 ntBASIC0.86□□□□□ -2.27
Pfdn1Q9CWM4 Gm26870-202ENSMUST00000181572 1143 ntTSL 5 BASIC0.86□□□□□ -2.27
Pfdn1Q9CWM4 Gm38323-201ENSMUST00000192450 210 ntBASIC0.86□□□□□ -2.27
Pfdn1Q9CWM4 Gm18546-201ENSMUST00000197245 676 ntBASIC0.86□□□□□ -2.27
Pfdn1Q9CWM4 A530053G22Rik-204ENSMUST00000204579 536 ntTSL 2 BASIC0.86□□□□□ -2.27
Pfdn1Q9CWM4 Gm45366-201ENSMUST00000209828 384 ntBASIC0.86□□□□□ -2.27
Pfdn1Q9CWM4 AC122225.1-201ENSMUST00000215641 369 ntBASIC0.86□□□□□ -2.27
Pfdn1Q9CWM4 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC0.86□□□□□ -2.27
Pfdn1Q9CWM4 AC027184.1-201ENSMUST00000226991 424 ntBASIC0.86□□□□□ -2.27
Pfdn1Q9CWM4 AC113031.5-201ENSMUST00000227116 606 ntBASIC0.86□□□□□ -2.27
Pfdn1Q9CWM4 Gm22997-201ENSMUST00000082845 107 ntBASIC0.86□□□□□ -2.27
Pfdn1Q9CWM4 Gm22723-201ENSMUST00000083820 129 ntBASIC0.86□□□□□ -2.27
Pfdn1Q9CWM4 Mir758-201ENSMUST00000103260 81 ntBASIC0.85□□□□□ -2.27
Pfdn1Q9CWM4 Gm14882-201ENSMUST00000117216 218 ntBASIC0.85□□□□□ -2.27
Pfdn1Q9CWM4 Gm11784-201ENSMUST00000118568 474 ntBASIC0.85□□□□□ -2.27
Pfdn1Q9CWM4 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC0.85□□□□□ -2.27
Pfdn1Q9CWM4 Gm25666-201ENSMUST00000157702 107 ntBASIC0.85□□□□□ -2.27
Pfdn1Q9CWM4 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC0.85□□□□□ -2.27
Pfdn1Q9CWM4 Gm25642-201ENSMUST00000175137 66 ntBASIC0.85□□□□□ -2.27
Pfdn1Q9CWM4 Mir6380-201ENSMUST00000184334 81 ntBASIC0.85□□□□□ -2.27
Pfdn1Q9CWM4 Gm37175-201ENSMUST00000192023 587 ntTSL 5 BASIC0.85□□□□□ -2.27
Pfdn1Q9CWM4 Gm42947-201ENSMUST00000198230 675 ntTSL 2 BASIC0.85□□□□□ -2.27
Pfdn1Q9CWM4 Vmn1r-ps5-201ENSMUST00000202963 931 ntBASIC0.85□□□□□ -2.27
Pfdn1Q9CWM4 Gm18854-201ENSMUST00000211196 329 ntBASIC0.85□□□□□ -2.27
Pfdn1Q9CWM4 Gm19441-201ENSMUST00000221545 330 ntBASIC0.85□□□□□ -2.27
Pfdn1Q9CWM4 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC0.84□□□□□ -2.27
Pfdn1Q9CWM4 Gm44240-201ENSMUST00000204015 2654 ntBASIC0.84□□□□□ -2.27
Pfdn1Q9CWM4 Gm22689-201ENSMUST00000102452 110 ntBASIC0.84□□□□□ -2.27
Pfdn1Q9CWM4 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC0.84□□□□□ -2.27
Pfdn1Q9CWM4 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC0.84□□□□□ -2.27
Pfdn1Q9CWM4 Gm6182-201ENSMUST00000156439 1208 ntBASIC0.84□□□□□ -2.27
Pfdn1Q9CWM4 Gm24846-201ENSMUST00000158033 108 ntBASIC0.84□□□□□ -2.27
Pfdn1Q9CWM4 Gm23205-201ENSMUST00000158671 103 ntBASIC0.84□□□□□ -2.27
Pfdn1Q9CWM4 Gm22129-201ENSMUST00000179034 107 ntBASIC0.84□□□□□ -2.27
Pfdn1Q9CWM4 Mir6370-201ENSMUST00000183510 120 ntBASIC0.84□□□□□ -2.27
Pfdn1Q9CWM4 Gm31849-201ENSMUST00000220306 375 ntBASIC0.84□□□□□ -2.27
Pfdn1Q9CWM4 AC115735.3-201ENSMUST00000227757 513 ntBASIC0.84□□□□□ -2.27
Pfdn1Q9CWM4 Tslp-201ENSMUST00000025237 1133 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
Pfdn1Q9CWM4 Snora41-201ENSMUST00000082668 132 ntBASIC0.84□□□□□ -2.27
Pfdn1Q9CWM4 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
Pfdn1Q9CWM4 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC0.83□□□□□ -2.28
Pfdn1Q9CWM4 Gm13454-201ENSMUST00000118166 483 ntBASIC0.83□□□□□ -2.28
Pfdn1Q9CWM4 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC0.83□□□□□ -2.28
Pfdn1Q9CWM4 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC0.83□□□□□ -2.28
Pfdn1Q9CWM4 Gm23048-201ENSMUST00000157237 129 ntBASIC0.83□□□□□ -2.28
Pfdn1Q9CWM4 Gm20477-201ENSMUST00000174028 280 ntBASIC0.83□□□□□ -2.28
Pfdn1Q9CWM4 Gm26195-201ENSMUST00000175035 101 ntBASIC0.83□□□□□ -2.28
Pfdn1Q9CWM4 Gm23963-201ENSMUST00000179603 77 ntBASIC0.83□□□□□ -2.28
Pfdn1Q9CWM4 Mir378a-201ENSMUST00000198300 66 ntBASIC0.83□□□□□ -2.28
Pfdn1Q9CWM4 Gm44825-201ENSMUST00000207557 150 ntBASIC0.83□□□□□ -2.28
Pfdn1Q9CWM4 Gm44598-201ENSMUST00000207566 150 ntBASIC0.83□□□□□ -2.28
Pfdn1Q9CWM4 Tas2r131-201ENSMUST00000082085 1036 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
Pfdn1Q9CWM4 Gm22247-201ENSMUST00000082476 131 ntBASIC0.83□□□□□ -2.28
Pfdn1Q9CWM4 Gm43498-201ENSMUST00000202002 1486 ntBASIC0.83□□□□□ -2.28
Pfdn1Q9CWM4 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC0.82□□□□□ -2.28
Pfdn1Q9CWM4 Gm15211-201ENSMUST00000118932 528 ntBASIC0.82□□□□□ -2.28
Pfdn1Q9CWM4 Gm13482-201ENSMUST00000119842 254 ntBASIC0.82□□□□□ -2.28
Pfdn1Q9CWM4 Gm23170-201ENSMUST00000157158 106 ntBASIC0.82□□□□□ -2.28
Pfdn1Q9CWM4 Snord11-201ENSMUST00000158468 84 ntBASIC0.82□□□□□ -2.28
Pfdn1Q9CWM4 Gm25836-201ENSMUST00000158918 123 ntBASIC0.82□□□□□ -2.28
Pfdn1Q9CWM4 Gm16399-201ENSMUST00000181423 219 ntBASIC0.82□□□□□ -2.28
Pfdn1Q9CWM4 Gm27959-201ENSMUST00000185172 111 ntBASIC0.82□□□□□ -2.28
Pfdn1Q9CWM4 Gm17771-201ENSMUST00000194477 1147 ntBASIC0.82□□□□□ -2.28
Pfdn1Q9CWM4 Gm18340-201ENSMUST00000196342 609 ntBASIC0.82□□□□□ -2.28
Pfdn1Q9CWM4 Gm23370-202ENSMUST00000197008 129 ntBASIC0.82□□□□□ -2.28
Pfdn1Q9CWM4 Gm44301-201ENSMUST00000200362 143 ntBASIC0.82□□□□□ -2.28
Pfdn1Q9CWM4 Gm42960-201ENSMUST00000202160 241 ntBASIC0.82□□□□□ -2.28
Pfdn1Q9CWM4 AC158803.1-201ENSMUST00000219495 316 ntBASIC0.82□□□□□ -2.28
Pfdn1Q9CWM4 AC159709.1-201ENSMUST00000220445 349 ntBASIC0.82□□□□□ -2.28
Pfdn1Q9CWM4 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
Pfdn1Q9CWM4 CT025602.1-201ENSMUST00000227281 382 ntBASIC0.82□□□□□ -2.28
Pfdn1Q9CWM4 Tas2r139-201ENSMUST00000057686 960 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
Pfdn1Q9CWM4 Olfr235-201ENSMUST00000073507 1079 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
Pfdn1Q9CWM4 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
Pfdn1Q9CWM4 Gm23246-201ENSMUST00000083371 67 ntBASIC0.82□□□□□ -2.28
Pfdn1Q9CWM4 Mir22-201ENSMUST00000083595 95 ntBASIC0.82□□□□□ -2.28
Pfdn1Q9CWM4 Mir29c-201ENSMUST00000083614 88 ntBASIC0.82□□□□□ -2.28
Pfdn1Q9CWM4 Gm25411-201ENSMUST00000083760 151 ntBASIC0.82□□□□□ -2.28
Pfdn1Q9CWM4 Gm17229-201ENSMUST00000097355 1138 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
Pfdn1Q9CWM4 Gm22488-201ENSMUST00000116811 127 ntBASIC0.81□□□□□ -2.28
Pfdn1Q9CWM4 Gm12656-201ENSMUST00000118149 577 ntBASIC0.81□□□□□ -2.28
Pfdn1Q9CWM4 Gm14669-201ENSMUST00000118841 250 ntBASIC0.81□□□□□ -2.28
Pfdn1Q9CWM4 Gm16218-201ENSMUST00000155424 388 ntBASIC0.81□□□□□ -2.28
Pfdn1Q9CWM4 Gm25220-201ENSMUST00000157546 95 ntBASIC0.81□□□□□ -2.28
Pfdn1Q9CWM4 Gm24601-201ENSMUST00000157970 143 ntBASIC0.81□□□□□ -2.28
Pfdn1Q9CWM4 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC0.81□□□□□ -2.28
Pfdn1Q9CWM4 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
Pfdn1Q9CWM4 Gm24020-201ENSMUST00000180156 108 ntBASIC0.81□□□□□ -2.28
Pfdn1Q9CWM4 Gm27640-201ENSMUST00000184580 147 ntBASIC0.81□□□□□ -2.28
Pfdn1Q9CWM4 Mir6993-201ENSMUST00000184912 65 ntBASIC0.81□□□□□ -2.28
Pfdn1Q9CWM4 Gm28344-201ENSMUST00000185704 279 ntBASIC0.81□□□□□ -2.28
Pfdn1Q9CWM4 Gm28825-201ENSMUST00000186233 238 ntBASIC0.81□□□□□ -2.28
Pfdn1Q9CWM4 1700016F12Rik-201ENSMUST00000198159 655 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
Pfdn1Q9CWM4 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC0.81□□□□□ -2.28
Pfdn1Q9CWM4 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC0.81□□□□□ -2.28
Pfdn1Q9CWM4 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC0.81□□□□□ -2.28
Retrieved 100 of 76,532 protein–RNA pairs in 140.7 ms