Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm24382-201ENSMUST00000122698 107 ntBASIC0.75□□□□□ -2.29
Col6a6Q8C6K9 Gm23278-201ENSMUST00000157911 143 ntBASIC0.75□□□□□ -2.29
Col6a6Q8C6K9 Spink14-202ENSMUST00000162265 542 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
Col6a6Q8C6K9 Spink10-206ENSMUST00000162511 684 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
Col6a6Q8C6K9 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC0.75□□□□□ -2.29
Col6a6Q8C6K9 Gm23415-201ENSMUST00000175519 83 ntBASIC0.75□□□□□ -2.29
Col6a6Q8C6K9 Gm22862-201ENSMUST00000178593 121 ntBASIC0.75□□□□□ -2.29
Col6a6Q8C6K9 Vmn2r-ps16-201ENSMUST00000178737 377 ntBASIC0.75□□□□□ -2.29
Col6a6Q8C6K9 Gm26435-201ENSMUST00000179026 107 ntBASIC0.75□□□□□ -2.29
Col6a6Q8C6K9 Vmn2r-ps15-201ENSMUST00000180112 377 ntBASIC0.75□□□□□ -2.29
Col6a6Q8C6K9 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC0.75□□□□□ -2.29
Col6a6Q8C6K9 AC163289.1-201ENSMUST00000215919 262 ntBASIC0.75□□□□□ -2.29
Col6a6Q8C6K9 Mir101a-201ENSMUST00000083517 83 ntBASIC0.75□□□□□ -2.29
Col6a6Q8C6K9 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC0.74□□□□□ -2.29
Col6a6Q8C6K9 Mir1197-201ENSMUST00000117037 120 ntBASIC0.74□□□□□ -2.29
Col6a6Q8C6K9 Gm15215-201ENSMUST00000117773 489 ntBASIC0.74□□□□□ -2.29
Col6a6Q8C6K9 Gm24060-201ENSMUST00000157494 95 ntBASIC0.74□□□□□ -2.29
Col6a6Q8C6K9 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
Col6a6Q8C6K9 Gm1553-201ENSMUST00000177934 658 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
Col6a6Q8C6K9 Gm21809-201ENSMUST00000178495 468 ntBASIC0.74□□□□□ -2.29
Col6a6Q8C6K9 Gm29550-201ENSMUST00000185543 285 ntBASIC0.74□□□□□ -2.29
Col6a6Q8C6K9 Gm28453-203ENSMUST00000187041 189 ntBASIC0.74□□□□□ -2.29
Col6a6Q8C6K9 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC0.74□□□□□ -2.29
Col6a6Q8C6K9 Ighv12-2-201ENSMUST00000191949 362 ntBASIC0.74□□□□□ -2.29
Col6a6Q8C6K9 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC0.74□□□□□ -2.29
Col6a6Q8C6K9 Igkv13-57-2-201ENSMUST00000196590 336 ntBASIC0.74□□□□□ -2.29
Col6a6Q8C6K9 Gm43708-201ENSMUST00000198857 961 ntBASIC0.74□□□□□ -2.29
Col6a6Q8C6K9 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
Col6a6Q8C6K9 Olfr852-ps1-201ENSMUST00000212273 226 ntBASIC0.74□□□□□ -2.29
Col6a6Q8C6K9 AC153361.2-202ENSMUST00000220405 842 ntTSL 5 BASIC0.74□□□□□ -2.29
Col6a6Q8C6K9 AC133176.1-201ENSMUST00000226668 219 ntBASIC0.74□□□□□ -2.29
Col6a6Q8C6K9 AC121960.3-201ENSMUST00000227077 623 ntBASIC0.74□□□□□ -2.29
Col6a6Q8C6K9 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC0.74□□□□□ -2.29
Col6a6Q8C6K9 Gm5127-201ENSMUST00000101296 1455 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
Col6a6Q8C6K9 Mndal-202ENSMUST00000186442 1646 ntAPPRIS ALT2 TSL 5 BASIC0.73□□□□□ -2.29
Col6a6Q8C6K9 Cmc4-202ENSMUST00000120286 516 ntAPPRIS P1 TSL 2 BASIC0.73□□□□□ -2.29
Col6a6Q8C6K9 Defa-ps12-201ENSMUST00000122353 193 ntBASIC0.73□□□□□ -2.29
Col6a6Q8C6K9 Gm7346-201ENSMUST00000169661 476 ntBASIC0.73□□□□□ -2.29
Col6a6Q8C6K9 Vmn1r-ps67-201ENSMUST00000173843 691 ntBASIC0.73□□□□□ -2.29
Col6a6Q8C6K9 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC0.73□□□□□ -2.29
Col6a6Q8C6K9 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC0.73□□□□□ -2.29
Col6a6Q8C6K9 Olfr843-201ENSMUST00000061365 1107 ntAPPRIS P1 BASIC0.73□□□□□ -2.29
Col6a6Q8C6K9 Gm11252-201ENSMUST00000120572 939 ntBASIC0.73□□□□□ -2.29
Col6a6Q8C6K9 Spanxn4-201ENSMUST00000172433 424 ntBASIC0.73□□□□□ -2.29
Col6a6Q8C6K9 Gm20794-201ENSMUST00000177626 628 ntBASIC0.73□□□□□ -2.29
Col6a6Q8C6K9 Gm21095-201ENSMUST00000177775 498 ntTSL 5 BASIC0.73□□□□□ -2.29
Col6a6Q8C6K9 Gm21858-201ENSMUST00000177834 498 ntTSL 5 BASIC0.73□□□□□ -2.29
Col6a6Q8C6K9 Gm20916-201ENSMUST00000178063 498 ntTSL 5 BASIC0.73□□□□□ -2.29
Col6a6Q8C6K9 Gm21760-201ENSMUST00000179811 498 ntTSL 5 BASIC0.73□□□□□ -2.29
Col6a6Q8C6K9 Gm21477-201ENSMUST00000179970 498 ntTSL 5 BASIC0.73□□□□□ -2.29
Col6a6Q8C6K9 Gm21117-201ENSMUST00000180133 498 ntTSL 5 BASIC0.73□□□□□ -2.29
Col6a6Q8C6K9 Gm20855-201ENSMUST00000180170 498 ntTSL 5 BASIC0.73□□□□□ -2.29
Col6a6Q8C6K9 Gm20931-201ENSMUST00000180249 498 ntTSL 5 BASIC0.73□□□□□ -2.29
Col6a6Q8C6K9 Gm20896-201ENSMUST00000180332 498 ntTSL 5 BASIC0.73□□□□□ -2.29
Col6a6Q8C6K9 Gm28356-202ENSMUST00000187566 858 ntBASIC0.73□□□□□ -2.29
Col6a6Q8C6K9 Gm20885-201ENSMUST00000190192 654 ntBASIC0.73□□□□□ -2.29
Col6a6Q8C6K9 Gm29288-201ENSMUST00000191582 901 ntBASIC0.73□□□□□ -2.29
Col6a6Q8C6K9 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC0.73□□□□□ -2.29
Col6a6Q8C6K9 Gm38044-201ENSMUST00000192964 487 ntBASIC0.73□□□□□ -2.29
Col6a6Q8C6K9 Gm33571-201ENSMUST00000193271 657 ntBASIC0.73□□□□□ -2.29
Col6a6Q8C6K9 Gm36866-201ENSMUST00000193343 657 ntBASIC0.73□□□□□ -2.29
Col6a6Q8C6K9 Gm36047-201ENSMUST00000193659 657 ntBASIC0.73□□□□□ -2.29
Col6a6Q8C6K9 Gm20857-201ENSMUST00000194766 657 ntBASIC0.73□□□□□ -2.29
Col6a6Q8C6K9 Gm20858-201ENSMUST00000195459 657 ntBASIC0.73□□□□□ -2.29
Col6a6Q8C6K9 Gm30638-201ENSMUST00000195570 656 ntBASIC0.73□□□□□ -2.29
Col6a6Q8C6K9 Gm42476-201ENSMUST00000198860 554 ntTSL 3 BASIC0.73□□□□□ -2.29
Col6a6Q8C6K9 4930402F11Rik-202ENSMUST00000207781 1178 ntTSL 5 BASIC0.73□□□□□ -2.29
Col6a6Q8C6K9 Olfr837-201ENSMUST00000212482 1040 ntAPPRIS P1 BASIC0.73□□□□□ -2.29
Col6a6Q8C6K9 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC0.73□□□□□ -2.29
Col6a6Q8C6K9 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC0.73□□□□□ -2.29
Col6a6Q8C6K9 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC0.73□□□□□ -2.29
Col6a6Q8C6K9 Gm24049-201ENSMUST00000102409 100 ntBASIC0.72□□□□□ -2.29
Col6a6Q8C6K9 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC0.72□□□□□ -2.29
Col6a6Q8C6K9 Gm23020-201ENSMUST00000158766 253 ntBASIC0.72□□□□□ -2.29
Col6a6Q8C6K9 Gm16546-201ENSMUST00000159442 355 ntBASIC0.72□□□□□ -2.29
Col6a6Q8C6K9 Gm9071-201ENSMUST00000165915 474 ntBASIC0.72□□□□□ -2.29
Col6a6Q8C6K9 Gm21885-201ENSMUST00000178891 327 ntBASIC0.72□□□□□ -2.29
Col6a6Q8C6K9 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC0.72□□□□□ -2.29
Col6a6Q8C6K9 Mir6904-201ENSMUST00000183443 67 ntBASIC0.72□□□□□ -2.29
Col6a6Q8C6K9 Gm29516-201ENSMUST00000190402 468 ntBASIC0.72□□□□□ -2.29
Col6a6Q8C6K9 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC0.72□□□□□ -2.29
Col6a6Q8C6K9 CT010480.5-201ENSMUST00000225026 217 ntBASIC0.72□□□□□ -2.29
Col6a6Q8C6K9 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC0.72□□□□□ -2.29
Col6a6Q8C6K9 Gm25391-201ENSMUST00000157342 134 ntBASIC0.72□□□□□ -2.29
Col6a6Q8C6K9 Gm15716-201ENSMUST00000162457 404 ntTSL 3 BASIC0.72□□□□□ -2.29
Col6a6Q8C6K9 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC0.72□□□□□ -2.29
Col6a6Q8C6K9 Mir6383-201ENSMUST00000184545 116 ntBASIC0.72□□□□□ -2.29
Col6a6Q8C6K9 Gm28755-201ENSMUST00000185773 199 ntBASIC0.72□□□□□ -2.29
Col6a6Q8C6K9 Gm29641-201ENSMUST00000188955 259 ntBASIC0.72□□□□□ -2.29
Col6a6Q8C6K9 Snord43-201ENSMUST00000199549 108 ntBASIC0.72□□□□□ -2.29
Col6a6Q8C6K9 Gm44058-201ENSMUST00000204335 467 ntBASIC0.72□□□□□ -2.29
Col6a6Q8C6K9 Gm44657-201ENSMUST00000208568 450 ntBASIC0.72□□□□□ -2.29
Col6a6Q8C6K9 Gm45313-201ENSMUST00000210584 178 ntBASIC0.72□□□□□ -2.29
Col6a6Q8C6K9 AC122834.1-201ENSMUST00000227182 425 ntBASIC0.72□□□□□ -2.29
Col6a6Q8C6K9 n-R5s79-201ENSMUST00000083071 120 ntBASIC0.72□□□□□ -2.29
Col6a6Q8C6K9 Gm7648-201ENSMUST00000173036 1658 ntBASIC0.72□□□□□ -2.29
Col6a6Q8C6K9 Gm12368-201ENSMUST00000122251 434 ntBASIC0.71□□□□□ -2.3
Col6a6Q8C6K9 Gm14903-201ENSMUST00000122435 537 ntBASIC0.71□□□□□ -2.3
Col6a6Q8C6K9 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC0.71□□□□□ -2.3
Col6a6Q8C6K9 Gm26348-201ENSMUST00000157528 240 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 76,532 protein–RNA pairs in 115 ms