Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Peli1-202ENSMUST00000101477 3703 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Trim47Q8C0E3 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Trim47Q8C0E3 Zfp981-201ENSMUST00000105735 3038 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
Trim47Q8C0E3 Gm37296-201ENSMUST00000192728 2922 ntBASIC4.69□□□□□ -1.66
Trim47Q8C0E3 Gm24276-201ENSMUST00000102181 110 ntBASIC4.69□□□□□ -1.66
Trim47Q8C0E3 Gm25022-201ENSMUST00000102205 83 ntBASIC4.69□□□□□ -1.66
Trim47Q8C0E3 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Trim47Q8C0E3 Gm12173-201ENSMUST00000117622 273 ntBASIC4.69□□□□□ -1.66
Trim47Q8C0E3 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Trim47Q8C0E3 Gm25889-201ENSMUST00000157775 107 ntBASIC4.69□□□□□ -1.66
Trim47Q8C0E3 Gm26373-201ENSMUST00000157833 103 ntBASIC4.69□□□□□ -1.66
Trim47Q8C0E3 Gm25364-201ENSMUST00000158851 107 ntBASIC4.69□□□□□ -1.66
Trim47Q8C0E3 Gm17416-201ENSMUST00000163724 201 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Trim47Q8C0E3 Mir467a-6-201ENSMUST00000177790 83 ntBASIC4.69□□□□□ -1.66
Trim47Q8C0E3 Mir467a-3-201ENSMUST00000178082 83 ntBASIC4.69□□□□□ -1.66
Trim47Q8C0E3 Mir467a-7-201ENSMUST00000178635 83 ntBASIC4.69□□□□□ -1.66
Trim47Q8C0E3 Mir467a-10-201ENSMUST00000179320 83 ntBASIC4.69□□□□□ -1.66
Trim47Q8C0E3 Mir467a-5-201ENSMUST00000179352 83 ntBASIC4.69□□□□□ -1.66
Trim47Q8C0E3 Mir467a-2-201ENSMUST00000179447 83 ntBASIC4.69□□□□□ -1.66
Trim47Q8C0E3 Mir467a-9-201ENSMUST00000179752 83 ntBASIC4.69□□□□□ -1.66
Trim47Q8C0E3 Mir467a-4-201ENSMUST00000179923 83 ntBASIC4.69□□□□□ -1.66
Trim47Q8C0E3 Mir467a-8-201ENSMUST00000180070 83 ntBASIC4.69□□□□□ -1.66
Trim47Q8C0E3 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC4.69□□□□□ -1.66
Trim47Q8C0E3 Gm22681-201ENSMUST00000083853 106 ntBASIC4.69□□□□□ -1.66
Trim47Q8C0E3 Gm25257-201ENSMUST00000083907 110 ntBASIC4.69□□□□□ -1.66
Trim47Q8C0E3 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC4.69□□□□□ -1.66
Trim47Q8C0E3 Vmn2r93-201ENSMUST00000079206 2574 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Trim47Q8C0E3 Olfr599-202ENSMUST00000214329 2183 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Trim47Q8C0E3 Naa16-201ENSMUST00000022597 13223 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Trim47Q8C0E3 Nlrp4b-201ENSMUST00000047809 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Trim47Q8C0E3 Prkdc-201ENSMUST00000023352 12647 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Trim47Q8C0E3 Rab30-201ENSMUST00000032879 9456 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Trim47Q8C0E3 Vmn1r72-203ENSMUST00000227010 6279 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Trim47Q8C0E3 Mdga2-203ENSMUST00000113942 423 ntBASIC4.68□□□□□ -1.66
Trim47Q8C0E3 Gm14626-201ENSMUST00000117619 216 ntBASIC4.68□□□□□ -1.66
Trim47Q8C0E3 Olfr1234-203ENSMUST00000137692 3827 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
Trim47Q8C0E3 Gm22156-201ENSMUST00000158409 141 ntBASIC4.68□□□□□ -1.66
Trim47Q8C0E3 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC4.68□□□□□ -1.66
Trim47Q8C0E3 Gm38298-201ENSMUST00000193578 118 ntBASIC4.68□□□□□ -1.66
Trim47Q8C0E3 Gm44337-201ENSMUST00000196553 114 ntBASIC4.68□□□□□ -1.66
Trim47Q8C0E3 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC4.68□□□□□ -1.66
Trim47Q8C0E3 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC4.68□□□□□ -1.66
Trim47Q8C0E3 Gm24356-201ENSMUST00000082859 106 ntBASIC4.68□□□□□ -1.66
Trim47Q8C0E3 Gm25136-201ENSMUST00000083253 115 ntBASIC4.68□□□□□ -1.66
Trim47Q8C0E3 Gm24164-201ENSMUST00000093663 104 ntBASIC4.68□□□□□ -1.66
Trim47Q8C0E3 Gm38240-201ENSMUST00000195110 2487 ntBASIC4.68□□□□□ -1.66
Trim47Q8C0E3 Gm44438-201ENSMUST00000204388 3236 ntBASIC4.68□□□□□ -1.66
Trim47Q8C0E3 AC156025.1-201ENSMUST00000223597 3551 ntBASIC4.68□□□□□ -1.66
Trim47Q8C0E3 Dst-202ENSMUST00000097786 17212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
Trim47Q8C0E3 Olfr705-202ENSMUST00000213721 3001 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Trim47Q8C0E3 Dync2h1-204ENSMUST00000140466 14264 ntAPPRIS P2 TSL 5 BASIC4.67□□□□□ -1.66
Trim47Q8C0E3 Gm21033-201ENSMUST00000208590 2608 ntBASIC4.67□□□□□ -1.66
Trim47Q8C0E3 Gm9343-201ENSMUST00000209016 2609 ntBASIC4.67□□□□□ -1.66
Trim47Q8C0E3 Oog1-202ENSMUST00000222112 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
Trim47Q8C0E3 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Trim47Q8C0E3 Mir872-201ENSMUST00000104728 81 ntBASIC4.67□□□□□ -1.66
Trim47Q8C0E3 Znrd1-201ENSMUST00000113669 742 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Trim47Q8C0E3 Gm13567-201ENSMUST00000118026 247 ntBASIC4.67□□□□□ -1.66
Trim47Q8C0E3 Gm13797-201ENSMUST00000121792 120 ntBASIC4.67□□□□□ -1.66
Trim47Q8C0E3 Gm25980-201ENSMUST00000157176 218 ntBASIC4.67□□□□□ -1.66
Trim47Q8C0E3 Gm23960-201ENSMUST00000157206 131 ntBASIC4.67□□□□□ -1.66
Trim47Q8C0E3 Gm22883-201ENSMUST00000157376 106 ntBASIC4.67□□□□□ -1.66
Trim47Q8C0E3 Gm23554-201ENSMUST00000157818 110 ntBASIC4.67□□□□□ -1.66
Trim47Q8C0E3 Gm26036-201ENSMUST00000158149 144 ntBASIC4.67□□□□□ -1.66
Trim47Q8C0E3 Gm23196-201ENSMUST00000158806 107 ntBASIC4.67□□□□□ -1.66
Trim47Q8C0E3 Gm44354-201ENSMUST00000196017 143 ntBASIC4.67□□□□□ -1.66
Trim47Q8C0E3 Gm44349-201ENSMUST00000197048 123 ntBASIC4.67□□□□□ -1.66
Trim47Q8C0E3 Gm42844-201ENSMUST00000200355 112 ntBASIC4.67□□□□□ -1.66
Trim47Q8C0E3 Hnrnpr-207ENSMUST00000148843 21452 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Trim47Q8C0E3 Gm14014-201ENSMUST00000156718 2717 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Trim47Q8C0E3 Gm45378-201ENSMUST00000211063 2711 ntBASIC4.67□□□□□ -1.66
Trim47Q8C0E3 Olfr1274-ps-202ENSMUST00000216111 3395 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Trim47Q8C0E3 Kctd12b-202ENSMUST00000112572 4851 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Trim47Q8C0E3 Fam111a-201ENSMUST00000025595 3267 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
Trim47Q8C0E3 Olfr111-202ENSMUST00000214259 2620 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Trim47Q8C0E3 Gm37479-201ENSMUST00000194169 3841 ntBASIC4.67□□□□□ -1.66
Trim47Q8C0E3 Zfp980-201ENSMUST00000105738 4006 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Trim47Q8C0E3 Tenm1-203ENSMUST00000115059 12879 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
Trim47Q8C0E3 Mybpc1-201ENSMUST00000119185 3752 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
Trim47Q8C0E3 Gm37941-201ENSMUST00000192170 2309 ntBASIC4.66□□□□□ -1.66
Trim47Q8C0E3 Neat1-201ENSMUST00000173672 20771 ntBASIC4.66□□□□□ -1.66
Trim47Q8C0E3 Tcf12-207ENSMUST00000183918 4308 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Trim47Q8C0E3 Neto2-201ENSMUST00000109686 5610 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Trim47Q8C0E3 Gm23226-201ENSMUST00000116927 103 ntBASIC4.66□□□□□ -1.66
Trim47Q8C0E3 Gm22477-201ENSMUST00000122569 316 ntBASIC4.66□□□□□ -1.66
Trim47Q8C0E3 Gm25045-201ENSMUST00000122670 99 ntBASIC4.66□□□□□ -1.66
Trim47Q8C0E3 Gm15350-201ENSMUST00000135138 569 ntTSL 2 BASIC4.66□□□□□ -1.66
Trim47Q8C0E3 Gm25961-201ENSMUST00000157174 135 ntBASIC4.66□□□□□ -1.66
Trim47Q8C0E3 Gm23337-201ENSMUST00000158959 118 ntBASIC4.66□□□□□ -1.66
Trim47Q8C0E3 Gm28118-201ENSMUST00000185957 294 ntBASIC4.66□□□□□ -1.66
Trim47Q8C0E3 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Trim47Q8C0E3 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC4.66□□□□□ -1.66
Trim47Q8C0E3 Gm44871-201ENSMUST00000207821 497 ntBASIC4.66□□□□□ -1.66
Trim47Q8C0E3 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Trim47Q8C0E3 Gm25592-201ENSMUST00000082635 131 ntBASIC4.66□□□□□ -1.66
Trim47Q8C0E3 Mir504-201ENSMUST00000093602 79 ntBASIC4.66□□□□□ -1.66
Trim47Q8C0E3 Slfn9-202ENSMUST00000092840 3862 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Trim47Q8C0E3 Fat3-205ENSMUST00000217308 18760 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Trim47Q8C0E3 B830012L14Rik-201ENSMUST00000182785 4505 ntTSL 5 BASIC4.66□□□□□ -1.66
Trim47Q8C0E3 Dnah7c-204ENSMUST00000189749 12207 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 97.5 ms