Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Mgat4e-202ENSMUST00000172898 1735 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.76
Sh3rf1Q69ZI1 Gm27047-201ENSMUST00000183072 1819 ntBASIC4.09□□□□□ -1.76
Sh3rf1Q69ZI1 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
Sh3rf1Q69ZI1 Olfr1440-208ENSMUST00000217062 7484 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.76
Sh3rf1Q69ZI1 Gm37006-201ENSMUST00000195253 2674 ntBASIC4.08□□□□□ -1.76
Sh3rf1Q69ZI1 Gm12374-201ENSMUST00000147108 3299 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Sh3rf1Q69ZI1 Gm37498-201ENSMUST00000193524 4002 ntBASIC4.08□□□□□ -1.76
Sh3rf1Q69ZI1 Vwc2l-203ENSMUST00000161937 4323 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Sh3rf1Q69ZI1 Gm24792-201ENSMUST00000104286 128 ntBASIC4.08□□□□□ -1.76
Sh3rf1Q69ZI1 Gm14748-201ENSMUST00000119819 411 ntBASIC4.08□□□□□ -1.76
Sh3rf1Q69ZI1 Gm14922-201ENSMUST00000121131 163 ntBASIC4.08□□□□□ -1.76
Sh3rf1Q69ZI1 Gm22453-201ENSMUST00000122801 318 ntBASIC4.08□□□□□ -1.76
Sh3rf1Q69ZI1 Gm23044-201ENSMUST00000157891 100 ntBASIC4.08□□□□□ -1.76
Sh3rf1Q69ZI1 Vmn2r30-202ENSMUST00000174368 3688 ntTSL 2 BASIC4.08□□□□□ -1.76
Sh3rf1Q69ZI1 Gm27733-201ENSMUST00000184803 68 ntBASIC4.08□□□□□ -1.76
Sh3rf1Q69ZI1 Gm19901-201ENSMUST00000192191 495 ntBASIC4.08□□□□□ -1.76
Sh3rf1Q69ZI1 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC4.08□□□□□ -1.76
Sh3rf1Q69ZI1 Gm42647-201ENSMUST00000195939 459 ntBASIC4.08□□□□□ -1.76
Sh3rf1Q69ZI1 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC4.08□□□□□ -1.76
Sh3rf1Q69ZI1 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC4.08□□□□□ -1.76
Sh3rf1Q69ZI1 CT030247.1-201ENSMUST00000216810 267 ntBASIC4.08□□□□□ -1.76
Sh3rf1Q69ZI1 AC140344.1-201ENSMUST00000223384 387 ntBASIC4.08□□□□□ -1.76
Sh3rf1Q69ZI1 AC168880.2-201ENSMUST00000224488 201 ntBASIC4.08□□□□□ -1.76
Sh3rf1Q69ZI1 Cwf19l2-201ENSMUST00000027027 4446 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Sh3rf1Q69ZI1 Gm25592-201ENSMUST00000082635 131 ntBASIC4.08□□□□□ -1.76
Sh3rf1Q69ZI1 Gm22806-201ENSMUST00000082738 136 ntBASIC4.08□□□□□ -1.76
Sh3rf1Q69ZI1 Gm25987-201ENSMUST00000083234 107 ntBASIC4.08□□□□□ -1.76
Sh3rf1Q69ZI1 Gm22294-201ENSMUST00000083308 104 ntBASIC4.08□□□□□ -1.76
Sh3rf1Q69ZI1 Mir133a-1-201ENSMUST00000083465 68 ntBASIC4.08□□□□□ -1.76
Sh3rf1Q69ZI1 Gm22353-201ENSMUST00000083918 136 ntBASIC4.08□□□□□ -1.76
Sh3rf1Q69ZI1 Gm37792-201ENSMUST00000195761 3413 ntBASIC4.08□□□□□ -1.76
Sh3rf1Q69ZI1 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
Sh3rf1Q69ZI1 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Sh3rf1Q69ZI1 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Sh3rf1Q69ZI1 Olfr1469-202ENSMUST00000216910 4106 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Sh3rf1Q69ZI1 Olfr354-202ENSMUST00000217479 9539 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Sh3rf1Q69ZI1 4921501E09Rik-201ENSMUST00000024121 3916 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Sh3rf1Q69ZI1 Gm24544-201ENSMUST00000103862 110 ntBASIC4.07□□□□□ -1.76
Sh3rf1Q69ZI1 Gm23319-201ENSMUST00000104467 131 ntBASIC4.07□□□□□ -1.76
Sh3rf1Q69ZI1 Gm23226-201ENSMUST00000116927 103 ntBASIC4.07□□□□□ -1.76
Sh3rf1Q69ZI1 Gm14816-201ENSMUST00000117174 294 ntBASIC4.07□□□□□ -1.76
Sh3rf1Q69ZI1 Gm22986-201ENSMUST00000122753 130 ntBASIC4.07□□□□□ -1.76
Sh3rf1Q69ZI1 Gm13686-201ENSMUST00000122851 350 ntTSL 3 BASIC4.07□□□□□ -1.76
Sh3rf1Q69ZI1 Mir6938-201ENSMUST00000184173 63 ntBASIC4.07□□□□□ -1.76
Sh3rf1Q69ZI1 Gm19774-201ENSMUST00000190667 114 ntBASIC4.07□□□□□ -1.76
Sh3rf1Q69ZI1 Gm44354-201ENSMUST00000196017 143 ntBASIC4.07□□□□□ -1.76
Sh3rf1Q69ZI1 Gm35702-201ENSMUST00000198653 511 ntBASIC4.07□□□□□ -1.76
Sh3rf1Q69ZI1 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Sh3rf1Q69ZI1 AC154213.2-201ENSMUST00000227138 187 ntBASIC4.07□□□□□ -1.76
Sh3rf1Q69ZI1 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Sh3rf1Q69ZI1 Olfr111-203ENSMUST00000215424 2548 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Sh3rf1Q69ZI1 Btbd35f5-201ENSMUST00000179538 1950 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Sh3rf1Q69ZI1 Gm8995-201ENSMUST00000184842 7280 ntBASIC4.07□□□□□ -1.76
Sh3rf1Q69ZI1 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Sh3rf1Q69ZI1 Olfr1150-ps1-201ENSMUST00000121186 3311 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Sh3rf1Q69ZI1 Vmn2r93-201ENSMUST00000079206 2574 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Sh3rf1Q69ZI1 Gm15180-201ENSMUST00000117745 492 ntBASIC4.06□□□□□ -1.76
Sh3rf1Q69ZI1 Gm25104-201ENSMUST00000122476 163 ntBASIC4.06□□□□□ -1.76
Sh3rf1Q69ZI1 Gm25177-201ENSMUST00000122634 117 ntBASIC4.06□□□□□ -1.76
Sh3rf1Q69ZI1 Gm11281-201ENSMUST00000141391 576 ntBASIC4.06□□□□□ -1.76
Sh3rf1Q69ZI1 Gm23956-201ENSMUST00000157211 119 ntBASIC4.06□□□□□ -1.76
Sh3rf1Q69ZI1 Gm26414-201ENSMUST00000157674 269 ntBASIC4.06□□□□□ -1.76
Sh3rf1Q69ZI1 Gm14419-204ENSMUST00000178182 192 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Sh3rf1Q69ZI1 Gm2004-202ENSMUST00000178872 192 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Sh3rf1Q69ZI1 Gm14295-203ENSMUST00000179435 192 ntTSL 5 BASIC4.06□□□□□ -1.76
Sh3rf1Q69ZI1 Mir8106-201ENSMUST00000184520 139 ntBASIC4.06□□□□□ -1.76
Sh3rf1Q69ZI1 Gm27952-201ENSMUST00000184748 105 ntBASIC4.06□□□□□ -1.76
Sh3rf1Q69ZI1 Gm37693-201ENSMUST00000194562 234 ntBASIC4.06□□□□□ -1.76
Sh3rf1Q69ZI1 Mir129b-201ENSMUST00000197461 65 ntBASIC4.06□□□□□ -1.76
Sh3rf1Q69ZI1 Gm42695-201ENSMUST00000199445 818 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Sh3rf1Q69ZI1 Gm18991-201ENSMUST00000209225 746 ntBASIC4.06□□□□□ -1.76
Sh3rf1Q69ZI1 AC157476.1-201ENSMUST00000215555 169 ntBASIC4.06□□□□□ -1.76
Sh3rf1Q69ZI1 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Sh3rf1Q69ZI1 Mmrn1-201ENSMUST00000129603 4477 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
Sh3rf1Q69ZI1 Vmn1r47-203ENSMUST00000227811 6792 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Sh3rf1Q69ZI1 Zfp458-201ENSMUST00000045969 3488 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
Sh3rf1Q69ZI1 Gm10811-201ENSMUST00000221985 2448 ntBASIC4.05□□□□□ -1.76
Sh3rf1Q69ZI1 Gpr34-202ENSMUST00000096492 1898 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Sh3rf1Q69ZI1 Trav8-1-201ENSMUST00000103643 328 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Sh3rf1Q69ZI1 Gm11456-201ENSMUST00000121070 256 ntBASIC4.05□□□□□ -1.76
Sh3rf1Q69ZI1 Gm22217-201ENSMUST00000157556 313 ntBASIC4.05□□□□□ -1.76
Sh3rf1Q69ZI1 Mir1967-201ENSMUST00000157789 82 ntBASIC4.05□□□□□ -1.76
Sh3rf1Q69ZI1 Gm24503-201ENSMUST00000158454 135 ntBASIC4.05□□□□□ -1.76
Sh3rf1Q69ZI1 Gm22135-201ENSMUST00000158752 108 ntBASIC4.05□□□□□ -1.76
Sh3rf1Q69ZI1 Gm25162-201ENSMUST00000158906 159 ntBASIC4.05□□□□□ -1.76
Sh3rf1Q69ZI1 Gm7582-201ENSMUST00000160831 603 ntBASIC4.05□□□□□ -1.76
Sh3rf1Q69ZI1 1700027A15Rik-203ENSMUST00000188793 423 ntTSL 3 BASIC4.05□□□□□ -1.76
Sh3rf1Q69ZI1 Gm17887-201ENSMUST00000200194 547 ntBASIC4.05□□□□□ -1.76
Sh3rf1Q69ZI1 Zfp950-210ENSMUST00000205854 466 ntTSL 3 BASIC4.05□□□□□ -1.76
Sh3rf1Q69ZI1 2200007N16Rik-201ENSMUST00000206367 238 ntBASIC4.05□□□□□ -1.76
Sh3rf1Q69ZI1 Gm45013-201ENSMUST00000206883 178 ntBASIC4.05□□□□□ -1.76
Sh3rf1Q69ZI1 AC108416.2-201ENSMUST00000226792 367 ntBASIC4.05□□□□□ -1.76
Sh3rf1Q69ZI1 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
Sh3rf1Q69ZI1 Gm24204-201ENSMUST00000082950 107 ntBASIC4.05□□□□□ -1.76
Sh3rf1Q69ZI1 Adam26a-201ENSMUST00000049577 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Sh3rf1Q69ZI1 Gm13630-201ENSMUST00000127849 3650 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Sh3rf1Q69ZI1 Gm5596-201ENSMUST00000207988 2421 ntBASIC4.05□□□□□ -1.76
Sh3rf1Q69ZI1 AC152159.1-201ENSMUST00000226719 2769 ntBASIC4.05□□□□□ -1.76
Sh3rf1Q69ZI1 Kctd12b-202ENSMUST00000112572 4851 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Sh3rf1Q69ZI1 Olfr1274-ps-202ENSMUST00000216111 3395 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 100.8 ms