Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 AC115735.3-201ENSMUST00000227757 513 ntBASIC1.91□□□□□ -2.1
Upf3bQ3ULL6 Gm21994-201ENSMUST00000063463 990 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
Upf3bQ3ULL6 Spink11-201ENSMUST00000097587 746 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Upf3bQ3ULL6 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC1.9□□□□□ -2.1
Upf3bQ3ULL6 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
Upf3bQ3ULL6 Gm14049-201ENSMUST00000121009 636 ntBASIC1.9□□□□□ -2.11
Upf3bQ3ULL6 Gm25113-201ENSMUST00000157185 143 ntBASIC1.9□□□□□ -2.11
Upf3bQ3ULL6 Mir669n-201ENSMUST00000158636 54 ntBASIC1.9□□□□□ -2.11
Upf3bQ3ULL6 Olfr180-201ENSMUST00000171656 1154 ntAPPRIS P2 TSL 2 BASIC1.9□□□□□ -2.11
Upf3bQ3ULL6 Mir3964-201ENSMUST00000174898 74 ntBASIC1.9□□□□□ -2.11
Upf3bQ3ULL6 Mir6370-201ENSMUST00000183510 120 ntBASIC1.9□□□□□ -2.11
Upf3bQ3ULL6 Mir6406-201ENSMUST00000183592 120 ntBASIC1.9□□□□□ -2.11
Upf3bQ3ULL6 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC1.9□□□□□ -2.11
Upf3bQ3ULL6 Gm28838-201ENSMUST00000186338 315 ntBASIC1.9□□□□□ -2.11
Upf3bQ3ULL6 Gm29635-201ENSMUST00000187221 315 ntBASIC1.9□□□□□ -2.11
Upf3bQ3ULL6 Gm29026-201ENSMUST00000187787 315 ntBASIC1.9□□□□□ -2.11
Upf3bQ3ULL6 Gm28797-201ENSMUST00000188543 315 ntBASIC1.9□□□□□ -2.11
Upf3bQ3ULL6 Gm28855-201ENSMUST00000188680 315 ntBASIC1.9□□□□□ -2.11
Upf3bQ3ULL6 Gm28705-201ENSMUST00000189548 315 ntBASIC1.9□□□□□ -2.11
Upf3bQ3ULL6 Gm28939-201ENSMUST00000190351 315 ntBASIC1.9□□□□□ -2.11
Upf3bQ3ULL6 Gm28223-201ENSMUST00000190469 315 ntBASIC1.9□□□□□ -2.11
Upf3bQ3ULL6 Gm29092-201ENSMUST00000190768 315 ntBASIC1.9□□□□□ -2.11
Upf3bQ3ULL6 Gm37319-201ENSMUST00000193500 636 ntBASIC1.9□□□□□ -2.11
Upf3bQ3ULL6 Gm42947-201ENSMUST00000198230 675 ntTSL 2 BASIC1.9□□□□□ -2.11
Upf3bQ3ULL6 Gm42739-201ENSMUST00000200687 226 ntBASIC1.9□□□□□ -2.11
Upf3bQ3ULL6 Gm7039-201ENSMUST00000205138 346 ntBASIC1.9□□□□□ -2.11
Upf3bQ3ULL6 Gm2676-201ENSMUST00000207279 606 ntBASIC1.9□□□□□ -2.11
Upf3bQ3ULL6 Gm44825-201ENSMUST00000207557 150 ntBASIC1.9□□□□□ -2.11
Upf3bQ3ULL6 Gm44598-201ENSMUST00000207566 150 ntBASIC1.9□□□□□ -2.11
Upf3bQ3ULL6 Vmn1r85-202ENSMUST00000209822 1251 ntAPPRIS P1 TSL 2 BASIC1.9□□□□□ -2.11
Upf3bQ3ULL6 AC130222.1-201ENSMUST00000221198 256 ntBASIC1.9□□□□□ -2.11
Upf3bQ3ULL6 AC122393.1-201ENSMUST00000226570 319 ntBASIC1.9□□□□□ -2.11
Upf3bQ3ULL6 Gm6369-201ENSMUST00000069626 412 ntBASIC1.9□□□□□ -2.11
Upf3bQ3ULL6 Gm10298-201ENSMUST00000074801 265 ntBASIC1.9□□□□□ -2.11
Upf3bQ3ULL6 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC1.9□□□□□ -2.11
Upf3bQ3ULL6 Mir758-201ENSMUST00000103260 81 ntBASIC1.89□□□□□ -2.11
Upf3bQ3ULL6 Gm24907-201ENSMUST00000116932 128 ntBASIC1.89□□□□□ -2.11
Upf3bQ3ULL6 Gm14932-201ENSMUST00000117112 453 ntBASIC1.89□□□□□ -2.11
Upf3bQ3ULL6 Gm11845-201ENSMUST00000117886 327 ntBASIC1.89□□□□□ -2.11
Upf3bQ3ULL6 Gm12656-201ENSMUST00000118149 577 ntBASIC1.89□□□□□ -2.11
Upf3bQ3ULL6 Gm12235-201ENSMUST00000118596 170 ntBASIC1.89□□□□□ -2.11
Upf3bQ3ULL6 Gm14899-201ENSMUST00000118673 548 ntBASIC1.89□□□□□ -2.11
Upf3bQ3ULL6 Gm16428-201ENSMUST00000121193 723 ntBASIC1.89□□□□□ -2.11
Upf3bQ3ULL6 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC1.89□□□□□ -2.11
Upf3bQ3ULL6 Gm23043-201ENSMUST00000157890 109 ntBASIC1.89□□□□□ -2.11
Upf3bQ3ULL6 Gm22535-201ENSMUST00000158174 119 ntBASIC1.89□□□□□ -2.11
Upf3bQ3ULL6 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC1.89□□□□□ -2.11
Upf3bQ3ULL6 Mir6382-201ENSMUST00000184055 110 ntBASIC1.89□□□□□ -2.11
Upf3bQ3ULL6 Mir6335-201ENSMUST00000184081 98 ntBASIC1.89□□□□□ -2.11
Upf3bQ3ULL6 Gm38238-201ENSMUST00000194334 346 ntBASIC1.89□□□□□ -2.11
Upf3bQ3ULL6 Gm42672-201ENSMUST00000197821 352 ntBASIC1.89□□□□□ -2.11
Upf3bQ3ULL6 Gm43512-201ENSMUST00000198495 176 ntBASIC1.89□□□□□ -2.11
Upf3bQ3ULL6 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC1.89□□□□□ -2.11
Upf3bQ3ULL6 4930402F11Rik-202ENSMUST00000207781 1178 ntTSL 5 BASIC1.89□□□□□ -2.11
Upf3bQ3ULL6 Cyp3a61-ps1-201ENSMUST00000218470 592 ntBASIC1.89□□□□□ -2.11
Upf3bQ3ULL6 AC164567.2-201ENSMUST00000219363 445 ntBASIC1.89□□□□□ -2.11
Upf3bQ3ULL6 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC1.89□□□□□ -2.11
Upf3bQ3ULL6 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
Upf3bQ3ULL6 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
Upf3bQ3ULL6 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC1.89□□□□□ -2.11
Upf3bQ3ULL6 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
Upf3bQ3ULL6 Mir3096-201ENSMUST00000116685 71 ntBASIC1.88□□□□□ -2.11
Upf3bQ3ULL6 Gm15090-201ENSMUST00000118787 1196 ntBASIC1.88□□□□□ -2.11
Upf3bQ3ULL6 Gm12926-201ENSMUST00000121158 409 ntBASIC1.88□□□□□ -2.11
Upf3bQ3ULL6 Gm15089-201ENSMUST00000122332 1196 ntBASIC1.88□□□□□ -2.11
Upf3bQ3ULL6 Gm24601-201ENSMUST00000157970 143 ntBASIC1.88□□□□□ -2.11
Upf3bQ3ULL6 Gm24572-201ENSMUST00000175505 88 ntBASIC1.88□□□□□ -2.11
Upf3bQ3ULL6 Mir6379-201ENSMUST00000183392 115 ntBASIC1.88□□□□□ -2.11
Upf3bQ3ULL6 Gm28825-201ENSMUST00000186233 238 ntBASIC1.88□□□□□ -2.11
Upf3bQ3ULL6 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC1.88□□□□□ -2.11
Upf3bQ3ULL6 Gm42647-201ENSMUST00000195939 459 ntBASIC1.88□□□□□ -2.11
Upf3bQ3ULL6 Gm44320-201ENSMUST00000199276 86 ntBASIC1.88□□□□□ -2.11
Upf3bQ3ULL6 Gm44609-201ENSMUST00000207157 460 ntBASIC1.88□□□□□ -2.11
Upf3bQ3ULL6 AC123656.2-201ENSMUST00000226726 227 ntBASIC1.88□□□□□ -2.11
Upf3bQ3ULL6 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
Upf3bQ3ULL6 Gm23848-201ENSMUST00000083826 106 ntBASIC1.88□□□□□ -2.11
Upf3bQ3ULL6 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
Upf3bQ3ULL6 Gm23516-201ENSMUST00000093728 107 ntBASIC1.88□□□□□ -2.11
Upf3bQ3ULL6 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC1.87□□□□□ -2.11
Upf3bQ3ULL6 Gm22091-201ENSMUST00000116908 127 ntBASIC1.87□□□□□ -2.11
Upf3bQ3ULL6 Gm15215-201ENSMUST00000117773 489 ntBASIC1.87□□□□□ -2.11
Upf3bQ3ULL6 AA413626-201ENSMUST00000121125 494 ntBASIC1.87□□□□□ -2.11
Upf3bQ3ULL6 Gm23332-201ENSMUST00000157424 275 ntBASIC1.87□□□□□ -2.11
Upf3bQ3ULL6 Gm24846-201ENSMUST00000158033 108 ntBASIC1.87□□□□□ -2.11
Upf3bQ3ULL6 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC1.87□□□□□ -2.11
Upf3bQ3ULL6 Gm4076-201ENSMUST00000179230 965 ntBASIC1.87□□□□□ -2.11
Upf3bQ3ULL6 Gm25156-201ENSMUST00000179809 79 ntBASIC1.87□□□□□ -2.11
Upf3bQ3ULL6 Mir7679-201ENSMUST00000183379 63 ntBASIC1.87□□□□□ -2.11
Upf3bQ3ULL6 Gm44615-201ENSMUST00000206548 358 ntBASIC1.87□□□□□ -2.11
Upf3bQ3ULL6 Gm7065-201ENSMUST00000222150 474 ntBASIC1.87□□□□□ -2.11
Upf3bQ3ULL6 AC192334.2-201ENSMUST00000223087 1091 ntBASIC1.87□□□□□ -2.11
Upf3bQ3ULL6 AC174797.4-201ENSMUST00000225510 347 ntBASIC1.87□□□□□ -2.11
Upf3bQ3ULL6 Tslp-201ENSMUST00000025237 1133 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Upf3bQ3ULL6 Olfr193-201ENSMUST00000076262 1009 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
Upf3bQ3ULL6 Gm26166-201ENSMUST00000083788 107 ntBASIC1.87□□□□□ -2.11
Upf3bQ3ULL6 Gm26002-201ENSMUST00000101915 107 ntBASIC1.86□□□□□ -2.11
Upf3bQ3ULL6 Gm26147-201ENSMUST00000104479 114 ntBASIC1.86□□□□□ -2.11
Upf3bQ3ULL6 Mir466n-201ENSMUST00000104798 94 ntBASIC1.86□□□□□ -2.11
Upf3bQ3ULL6 Gm12550-201ENSMUST00000118478 329 ntBASIC1.86□□□□□ -2.11
Upf3bQ3ULL6 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 112.6 ms