Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gm16261-201ENSMUST00000096813 205 ntBASIC1.53□□□□□ -2.16
Nkx3-1P97436 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.17
Nkx3-1P97436 Gm37903-201ENSMUST00000192122 2381 ntBASIC1.52□□□□□ -2.17
Nkx3-1P97436 Gm14405-201ENSMUST00000117808 2330 ntBASIC1.52□□□□□ -2.17
Nkx3-1P97436 Gm1980-201ENSMUST00000123131 2306 ntBASIC1.52□□□□□ -2.17
Nkx3-1P97436 Gm45461-201ENSMUST00000211726 4535 ntBASIC1.52□□□□□ -2.17
Nkx3-1P97436 Gm24049-201ENSMUST00000102409 100 ntBASIC1.52□□□□□ -2.17
Nkx3-1P97436 Gm22091-201ENSMUST00000116908 127 ntBASIC1.52□□□□□ -2.17
Nkx3-1P97436 Gm13510-201ENSMUST00000118659 429 ntBASIC1.52□□□□□ -2.17
Nkx3-1P97436 Gm13482-201ENSMUST00000119842 254 ntBASIC1.52□□□□□ -2.17
Nkx3-1P97436 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC1.52□□□□□ -2.17
Nkx3-1P97436 Zfp965-204ENSMUST00000143490 297 ntTSL 5 BASIC1.52□□□□□ -2.17
Nkx3-1P97436 Gm24911-201ENSMUST00000157292 136 ntBASIC1.52□□□□□ -2.17
Nkx3-1P97436 Gm22665-201ENSMUST00000158720 275 ntBASIC1.52□□□□□ -2.17
Nkx3-1P97436 Gm17161-201ENSMUST00000169187 524 ntBASIC1.52□□□□□ -2.17
Nkx3-1P97436 Mir3964-201ENSMUST00000174898 74 ntBASIC1.52□□□□□ -2.17
Nkx3-1P97436 Gm4076-201ENSMUST00000179230 965 ntBASIC1.52□□□□□ -2.17
Nkx3-1P97436 Mir6338-201ENSMUST00000183389 109 ntBASIC1.52□□□□□ -2.17
Nkx3-1P97436 Mir6382-201ENSMUST00000184055 110 ntBASIC1.52□□□□□ -2.17
Nkx3-1P97436 Gm28283-201ENSMUST00000185509 178 ntBASIC1.52□□□□□ -2.17
Nkx3-1P97436 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC1.52□□□□□ -2.17
Nkx3-1P97436 Gm37054-201ENSMUST00000193481 543 ntBASIC1.52□□□□□ -2.17
Nkx3-1P97436 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.52□□□□□ -2.17
Nkx3-1P97436 Gm18635-201ENSMUST00000199020 1060 ntBASIC1.52□□□□□ -2.17
Nkx3-1P97436 Gm43026-201ENSMUST00000202972 325 ntBASIC1.52□□□□□ -2.17
Nkx3-1P97436 Gm44295-201ENSMUST00000203805 437 ntBASIC1.52□□□□□ -2.17
Nkx3-1P97436 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC1.52□□□□□ -2.17
Nkx3-1P97436 Gm18160-201ENSMUST00000214279 827 ntBASIC1.52□□□□□ -2.17
Nkx3-1P97436 Lilrb4a-205ENSMUST00000217705 1142 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
Nkx3-1P97436 AC167977.2-201ENSMUST00000225676 682 ntBASIC1.52□□□□□ -2.17
Nkx3-1P97436 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC1.52□□□□□ -2.17
Nkx3-1P97436 CT009550.5-201ENSMUST00000226286 382 ntBASIC1.52□□□□□ -2.17
Nkx3-1P97436 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
Nkx3-1P97436 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC1.52□□□□□ -2.17
Nkx3-1P97436 Gm23645-201ENSMUST00000083228 108 ntBASIC1.52□□□□□ -2.17
Nkx3-1P97436 Gm5670-201ENSMUST00000093546 372 ntBASIC1.52□□□□□ -2.17
Nkx3-1P97436 Mir463-201ENSMUST00000093570 75 ntBASIC1.52□□□□□ -2.17
Nkx3-1P97436 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
Nkx3-1P97436 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
Nkx3-1P97436 Olfr1487-203ENSMUST00000209005 2061 ntTSL 3 BASIC1.51□□□□□ -2.17
Nkx3-1P97436 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
Nkx3-1P97436 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
Nkx3-1P97436 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
Nkx3-1P97436 Gm12656-201ENSMUST00000118149 577 ntBASIC1.51□□□□□ -2.17
Nkx3-1P97436 Gm11813-201ENSMUST00000118586 291 ntBASIC1.51□□□□□ -2.17
Nkx3-1P97436 Gm15113-201ENSMUST00000119280 836 ntBASIC1.51□□□□□ -2.17
Nkx3-1P97436 Gm12926-201ENSMUST00000121158 409 ntBASIC1.51□□□□□ -2.17
Nkx3-1P97436 Gm16354-201ENSMUST00000155376 150 ntBASIC1.51□□□□□ -2.17
Nkx3-1P97436 Gm26275-201ENSMUST00000157101 268 ntBASIC1.51□□□□□ -2.17
Nkx3-1P97436 Gm24885-201ENSMUST00000158783 270 ntBASIC1.51□□□□□ -2.17
Nkx3-1P97436 Gm5277-201ENSMUST00000164923 556 ntBASIC1.51□□□□□ -2.17
Nkx3-1P97436 Gm17054-201ENSMUST00000169811 259 ntBASIC1.51□□□□□ -2.17
Nkx3-1P97436 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC1.51□□□□□ -2.17
Nkx3-1P97436 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC1.51□□□□□ -2.17
Nkx3-1P97436 Gm37568-201ENSMUST00000191755 364 ntBASIC1.51□□□□□ -2.17
Nkx3-1P97436 Gm37026-201ENSMUST00000191917 535 ntTSL 5 BASIC1.51□□□□□ -2.17
Nkx3-1P97436 Gm42805-201ENSMUST00000196158 276 ntBASIC1.51□□□□□ -2.17
Nkx3-1P97436 Igkv2-105-201ENSMUST00000196931 377 ntBASIC1.51□□□□□ -2.17
Nkx3-1P97436 Gm43193-201ENSMUST00000197732 441 ntBASIC1.51□□□□□ -2.17
Nkx3-1P97436 Gm43114-201ENSMUST00000198298 343 ntBASIC1.51□□□□□ -2.17
Nkx3-1P97436 Trav15d-3-201ENSMUST00000198604 167 ntBASIC1.51□□□□□ -2.17
Nkx3-1P97436 Trav15n-3-201ENSMUST00000200498 168 ntBASIC1.51□□□□□ -2.17
Nkx3-1P97436 Gm44254-201ENSMUST00000204184 322 ntBASIC1.51□□□□□ -2.17
Nkx3-1P97436 AL669916.3-201ENSMUST00000213855 94 ntBASIC1.51□□□□□ -2.17
Nkx3-1P97436 AL669916.6-201ENSMUST00000214610 94 ntBASIC1.51□□□□□ -2.17
Nkx3-1P97436 Gm18488-201ENSMUST00000215082 364 ntBASIC1.51□□□□□ -2.17
Nkx3-1P97436 AL669916.4-201ENSMUST00000215976 94 ntBASIC1.51□□□□□ -2.17
Nkx3-1P97436 AL669916.1-201ENSMUST00000217640 94 ntBASIC1.51□□□□□ -2.17
Nkx3-1P97436 CT010480.1-201ENSMUST00000223612 363 ntBASIC1.51□□□□□ -2.17
Nkx3-1P97436 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
Nkx3-1P97436 Gm26206-201ENSMUST00000082908 110 ntBASIC1.51□□□□□ -2.17
Nkx3-1P97436 Gm25755-201ENSMUST00000083396 107 ntBASIC1.51□□□□□ -2.17
Nkx3-1P97436 Snord14d-201ENSMUST00000083424 86 ntBASIC1.51□□□□□ -2.17
Nkx3-1P97436 Mir208a-201ENSMUST00000083498 83 ntBASIC1.51□□□□□ -2.17
Nkx3-1P97436 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC1.51□□□□□ -2.17
Nkx3-1P97436 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
Nkx3-1P97436 Gm43924-201ENSMUST00000204851 1736 ntBASIC1.51□□□□□ -2.17
Nkx3-1P97436 AC162910.1-201ENSMUST00000221219 1723 ntBASIC1.51□□□□□ -2.17
Nkx3-1P97436 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
Nkx3-1P97436 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
Nkx3-1P97436 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
Nkx3-1P97436 AC125532.1-201ENSMUST00000216210 2334 ntBASIC1.5□□□□□ -2.17
Nkx3-1P97436 Gm33962-201ENSMUST00000182643 2592 ntBASIC1.5□□□□□ -2.17
Nkx3-1P97436 Gm15175-201ENSMUST00000117629 132 ntBASIC1.5□□□□□ -2.17
Nkx3-1P97436 Gm15312-201ENSMUST00000118827 271 ntBASIC1.5□□□□□ -2.17
Nkx3-1P97436 Gm15309-201ENSMUST00000121644 240 ntBASIC1.5□□□□□ -2.17
Nkx3-1P97436 U6.1-201ENSMUST00000157443 101 ntBASIC1.5□□□□□ -2.17
Nkx3-1P97436 Gm25220-201ENSMUST00000157546 95 ntBASIC1.5□□□□□ -2.17
Nkx3-1P97436 Gm22316-201ENSMUST00000158012 216 ntBASIC1.5□□□□□ -2.17
Nkx3-1P97436 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
Nkx3-1P97436 Gm26195-201ENSMUST00000175035 101 ntBASIC1.5□□□□□ -2.17
Nkx3-1P97436 Gm24656-201ENSMUST00000177548 132 ntBASIC1.5□□□□□ -2.17
Nkx3-1P97436 Gm24264-201ENSMUST00000179835 94 ntBASIC1.5□□□□□ -2.17
Nkx3-1P97436 Gm28755-201ENSMUST00000185773 199 ntBASIC1.5□□□□□ -2.17
Nkx3-1P97436 Gm29184-201ENSMUST00000190038 334 ntBASIC1.5□□□□□ -2.17
Nkx3-1P97436 Gm44324-201ENSMUST00000198517 135 ntBASIC1.5□□□□□ -2.17
Nkx3-1P97436 Gm43431-201ENSMUST00000198577 340 ntBASIC1.5□□□□□ -2.17
Nkx3-1P97436 4930402F11Rik-202ENSMUST00000207781 1178 ntTSL 5 BASIC1.5□□□□□ -2.17
Nkx3-1P97436 AC116726.2-201ENSMUST00000217629 986 ntBASIC1.5□□□□□ -2.17
Nkx3-1P97436 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC1.5□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms