Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm43991-201ENSMUST00000203751 274 ntBASIC0.53□□□□□ -2.32
Col6a3E9PWQ3 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC0.53□□□□□ -2.32
Col6a3E9PWQ3 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
Col6a3E9PWQ3 Spag11b-201ENSMUST00000039075 342 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.32
Col6a3E9PWQ3 AC160984.1-201ENSMUST00000225855 3154 ntBASIC0.53□□□□□ -2.33
Col6a3E9PWQ3 AC122210.1-201ENSMUST00000217923 675 ntTSL 3 BASIC0.53□□□□□ -2.33
Col6a3E9PWQ3 CT030030.1-201ENSMUST00000218809 152 ntBASIC0.53□□□□□ -2.33
Col6a3E9PWQ3 Olfr821-202ENSMUST00000205181 1993 ntAPPRIS P1 TSL 2 BASIC0.53□□□□□ -2.33
Col6a3E9PWQ3 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
Col6a3E9PWQ3 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC0.52□□□□□ -2.33
Col6a3E9PWQ3 Mir147-201ENSMUST00000102354 79 ntBASIC0.52□□□□□ -2.33
Col6a3E9PWQ3 n-R5s158-201ENSMUST00000104095 118 ntBASIC0.52□□□□□ -2.33
Col6a3E9PWQ3 Gm12837-201ENSMUST00000120131 373 ntBASIC0.52□□□□□ -2.33
Col6a3E9PWQ3 Gm20534-201ENSMUST00000172957 172 ntBASIC0.52□□□□□ -2.33
Col6a3E9PWQ3 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC0.52□□□□□ -2.33
Col6a3E9PWQ3 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC0.52□□□□□ -2.33
Col6a3E9PWQ3 Gm24456-201ENSMUST00000083198 107 ntBASIC0.52□□□□□ -2.33
Col6a3E9PWQ3 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC0.52□□□□□ -2.33
Col6a3E9PWQ3 Gm12779-201ENSMUST00000121496 143 ntBASIC0.52□□□□□ -2.33
Col6a3E9PWQ3 Gm25718-201ENSMUST00000158632 118 ntBASIC0.52□□□□□ -2.33
Col6a3E9PWQ3 Gm22633-201ENSMUST00000179834 107 ntBASIC0.52□□□□□ -2.33
Col6a3E9PWQ3 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC0.52□□□□□ -2.33
Col6a3E9PWQ3 Gm26328-201ENSMUST00000082821 107 ntBASIC0.52□□□□□ -2.33
Col6a3E9PWQ3 Gm14731-201ENSMUST00000119216 376 ntBASIC0.51□□□□□ -2.33
Col6a3E9PWQ3 Gm25150-201ENSMUST00000157121 60 ntBASIC0.51□□□□□ -2.33
Col6a3E9PWQ3 Gm19563-201ENSMUST00000222031 270 ntBASIC0.51□□□□□ -2.33
Col6a3E9PWQ3 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC0.51□□□□□ -2.33
Col6a3E9PWQ3 Gm24207-201ENSMUST00000082781 108 ntBASIC0.51□□□□□ -2.33
Col6a3E9PWQ3 Gm25199-201ENSMUST00000083095 104 ntBASIC0.51□□□□□ -2.33
Col6a3E9PWQ3 Snora34-201ENSMUST00000083402 138 ntBASIC0.51□□□□□ -2.33
Col6a3E9PWQ3 Olfr810-201ENSMUST00000091986 1006 ntAPPRIS P1 BASIC0.51□□□□□ -2.33
Col6a3E9PWQ3 AA413626-201ENSMUST00000121125 494 ntBASIC0.51□□□□□ -2.33
Col6a3E9PWQ3 Gm25388-201ENSMUST00000157339 151 ntBASIC0.51□□□□□ -2.33
Col6a3E9PWQ3 Gm19202-201ENSMUST00000198096 808 ntBASIC0.51□□□□□ -2.33
Col6a3E9PWQ3 Gm25896-201ENSMUST00000083713 136 ntBASIC0.51□□□□□ -2.33
Col6a3E9PWQ3 Gm44562-201ENSMUST00000207194 1347 ntBASIC0.51□□□□□ -2.33
Col6a3E9PWQ3 Gm14761-201ENSMUST00000121363 262 ntBASIC0.51□□□□□ -2.33
Col6a3E9PWQ3 n-R5s192-201ENSMUST00000122577 119 ntBASIC0.51□□□□□ -2.33
Col6a3E9PWQ3 Gm23983-201ENSMUST00000157142 114 ntBASIC0.51□□□□□ -2.33
Col6a3E9PWQ3 U6.1-201ENSMUST00000157443 101 ntBASIC0.51□□□□□ -2.33
Col6a3E9PWQ3 Gm28647-201ENSMUST00000188416 197 ntBASIC0.51□□□□□ -2.33
Col6a3E9PWQ3 AC124542.1-201ENSMUST00000205588 908 ntBASIC0.51□□□□□ -2.33
Col6a3E9PWQ3 Mir32-201ENSMUST00000083610 70 ntBASIC0.51□□□□□ -2.33
Col6a3E9PWQ3 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC0.51□□□□□ -2.33
Col6a3E9PWQ3 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
Col6a3E9PWQ3 Gm26011-201ENSMUST00000104410 104 ntBASIC0.5□□□□□ -2.33
Col6a3E9PWQ3 Gm5709-201ENSMUST00000177879 1165 ntBASIC0.5□□□□□ -2.33
Col6a3E9PWQ3 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC0.5□□□□□ -2.33
Col6a3E9PWQ3 Nron-204ENSMUST00000158971 370 ntBASIC0.5□□□□□ -2.33
Col6a3E9PWQ3 Gm45262-201ENSMUST00000209917 1463 ntBASIC0.49□□□□□ -2.33
Col6a3E9PWQ3 1700029B22Rik-202ENSMUST00000186532 694 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
Col6a3E9PWQ3 Vmn1r52-201ENSMUST00000079832 930 ntAPPRIS P1 BASIC0.49□□□□□ -2.33
Col6a3E9PWQ3 Gm14444-202ENSMUST00000109070 1281 ntAPPRIS P1 TSL 3 BASIC0.49□□□□□ -2.33
Col6a3E9PWQ3 Gm4916-201ENSMUST00000126139 642 ntBASIC0.49□□□□□ -2.33
Col6a3E9PWQ3 Gm25198-201ENSMUST00000178574 110 ntBASIC0.49□□□□□ -2.33
Col6a3E9PWQ3 Gm28408-201ENSMUST00000191557 463 ntBASIC0.49□□□□□ -2.33
Col6a3E9PWQ3 Gm37557-201ENSMUST00000191640 139 ntBASIC0.49□□□□□ -2.33
Col6a3E9PWQ3 Trbv6-201ENSMUST00000193743 276 ntBASIC0.49□□□□□ -2.33
Col6a3E9PWQ3 Gm42807-201ENSMUST00000200141 329 ntBASIC0.49□□□□□ -2.33
Col6a3E9PWQ3 Gm9373-201ENSMUST00000208724 599 ntBASIC0.49□□□□□ -2.33
Col6a3E9PWQ3 Olfr928-ps1-201ENSMUST00000213313 237 ntBASIC0.49□□□□□ -2.33
Col6a3E9PWQ3 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
Col6a3E9PWQ3 Mir362-201ENSMUST00000093592 65 ntBASIC0.49□□□□□ -2.33
Col6a3E9PWQ3 Gm16186-201ENSMUST00000120132 216 ntBASIC0.49□□□□□ -2.33
Col6a3E9PWQ3 Gm14765-201ENSMUST00000121954 326 ntBASIC0.49□□□□□ -2.33
Col6a3E9PWQ3 Gm22839-201ENSMUST00000158436 304 ntBASIC0.49□□□□□ -2.33
Col6a3E9PWQ3 Vmn2r-ps64-201ENSMUST00000173690 523 ntBASIC0.49□□□□□ -2.33
Col6a3E9PWQ3 Gm12002-203ENSMUST00000174550 923 ntTSL 3 BASIC0.49□□□□□ -2.33
Col6a3E9PWQ3 Gm24813-201ENSMUST00000175310 84 ntBASIC0.49□□□□□ -2.33
Col6a3E9PWQ3 Gm20561-201ENSMUST00000188131 292 ntBASIC0.49□□□□□ -2.33
Col6a3E9PWQ3 Gm28169-201ENSMUST00000190342 345 ntBASIC0.49□□□□□ -2.33
Col6a3E9PWQ3 Gm18854-201ENSMUST00000211196 329 ntBASIC0.49□□□□□ -2.33
Col6a3E9PWQ3 Olfr196-202ENSMUST00000205471 1711 ntAPPRIS P1 TSL 3 BASIC0.48□□□□□ -2.33
Col6a3E9PWQ3 Gm12155-201ENSMUST00000121267 160 ntBASIC0.48□□□□□ -2.33
Col6a3E9PWQ3 Gm22107-201ENSMUST00000122548 100 ntBASIC0.48□□□□□ -2.33
Col6a3E9PWQ3 Gm26101-201ENSMUST00000157246 105 ntBASIC0.48□□□□□ -2.33
Col6a3E9PWQ3 Gm25413-201ENSMUST00000158544 312 ntBASIC0.48□□□□□ -2.33
Col6a3E9PWQ3 2810025M15Rik-203ENSMUST00000189791 251 ntBASIC0.48□□□□□ -2.33
Col6a3E9PWQ3 Gm38045-201ENSMUST00000193536 199 ntTSL 5 BASIC0.48□□□□□ -2.33
Col6a3E9PWQ3 CT025538.2-201ENSMUST00000226083 772 ntBASIC0.48□□□□□ -2.33
Col6a3E9PWQ3 Arhgap5-202ENSMUST00000217820 2332 ntTSL 5 BASIC0.48□□□□□ -2.33
Col6a3E9PWQ3 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.48□□□□□ -2.33
Col6a3E9PWQ3 Gm14885-201ENSMUST00000117969 496 ntBASIC0.48□□□□□ -2.33
Col6a3E9PWQ3 Gm15584-201ENSMUST00000123231 759 ntTSL 2 BASIC0.48□□□□□ -2.33
Col6a3E9PWQ3 Gm22559-201ENSMUST00000157329 134 ntBASIC0.48□□□□□ -2.33
Col6a3E9PWQ3 Gm25520-201ENSMUST00000158389 118 ntBASIC0.48□□□□□ -2.33
Col6a3E9PWQ3 Gm28453-203ENSMUST00000187041 189 ntBASIC0.48□□□□□ -2.33
Col6a3E9PWQ3 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC0.48□□□□□ -2.33
Col6a3E9PWQ3 Gm44349-201ENSMUST00000197048 123 ntBASIC0.48□□□□□ -2.33
Col6a3E9PWQ3 Olfr1479-ps1-201ENSMUST00000207752 382 ntBASIC0.48□□□□□ -2.33
Col6a3E9PWQ3 AC159709.1-201ENSMUST00000220445 349 ntBASIC0.48□□□□□ -2.33
Col6a3E9PWQ3 Gm22302-201ENSMUST00000082657 106 ntBASIC0.48□□□□□ -2.33
Col6a3E9PWQ3 Gm22429-201ENSMUST00000158553 130 ntBASIC0.47□□□□□ -2.33
Col6a3E9PWQ3 Vmn1r-ps146-201ENSMUST00000176131 525 ntBASIC0.47□□□□□ -2.33
Col6a3E9PWQ3 AC124356.2-201ENSMUST00000221874 336 ntBASIC0.47□□□□□ -2.33
Col6a3E9PWQ3 Olfr1123-201ENSMUST00000054974 972 ntAPPRIS P2 BASIC0.47□□□□□ -2.33
Col6a3E9PWQ3 Gm2003-201ENSMUST00000118537 636 ntBASIC0.47□□□□□ -2.33
Col6a3E9PWQ3 Gm24903-201ENSMUST00000158131 126 ntBASIC0.47□□□□□ -2.33
Col6a3E9PWQ3 Gm22766-201ENSMUST00000158372 99 ntBASIC0.47□□□□□ -2.33
Col6a3E9PWQ3 Mir5099-201ENSMUST00000175257 74 ntBASIC0.47□□□□□ -2.33
Retrieved 100 of 76,532 protein–RNA pairs in 83.7 ms