Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Snord14c-201ENSMUST00000101927 86 ntBASIC5.45□□□□□ -1.54
Trim35Q8C006 Gm26172-201ENSMUST00000158421 134 ntBASIC5.45□□□□□ -1.54
Trim35Q8C006 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Trim35Q8C006 Gm17268-201ENSMUST00000171515 66 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Trim35Q8C006 Gm22122-201ENSMUST00000175147 200 ntBASIC5.45□□□□□ -1.54
Trim35Q8C006 Gm24801-201ENSMUST00000178503 105 ntBASIC5.45□□□□□ -1.54
Trim35Q8C006 Mir6971-201ENSMUST00000183497 63 ntBASIC5.45□□□□□ -1.54
Trim35Q8C006 AL645522.1-201ENSMUST00000197692 104 ntBASIC5.45□□□□□ -1.54
Trim35Q8C006 AC126672.1-201ENSMUST00000217096 396 ntBASIC5.45□□□□□ -1.54
Trim35Q8C006 Rps11-ps4-201ENSMUST00000062226 474 ntBASIC5.45□□□□□ -1.54
Trim35Q8C006 Mir7-2-201ENSMUST00000083675 97 ntBASIC5.45□□□□□ -1.54
Trim35Q8C006 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Trim35Q8C006 Gcc2-208ENSMUST00000162860 6400 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
Trim35Q8C006 Zfy1-201ENSMUST00000065545 2783 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Trim35Q8C006 Zfp143-202ENSMUST00000169638 2914 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Trim35Q8C006 Gm42447-201ENSMUST00000200102 2903 ntBASIC5.45□□□□□ -1.54
Trim35Q8C006 Cntn6-205ENSMUST00000162872 3467 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Trim35Q8C006 Gm37400-201ENSMUST00000193148 3605 ntBASIC5.45□□□□□ -1.54
Trim35Q8C006 Kdm4c-202ENSMUST00000077851 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Trim35Q8C006 Pja2-203ENSMUST00000172733 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Trim35Q8C006 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Trim35Q8C006 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC5.45□□□□□ -1.54
Trim35Q8C006 Epha7-203ENSMUST00000108191 6615 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Trim35Q8C006 Gm4759-201ENSMUST00000183414 6622 ntBASIC5.45□□□□□ -1.54
Trim35Q8C006 Olfr44-202ENSMUST00000215065 3578 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
Trim35Q8C006 Lrrc4c-202ENSMUST00000135431 3646 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Trim35Q8C006 Gm14015-201ENSMUST00000130634 3949 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Trim35Q8C006 Gm37212-201ENSMUST00000192582 3650 ntBASIC5.44□□□□□ -1.54
Trim35Q8C006 Spag5-201ENSMUST00000045026 3887 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Trim35Q8C006 Gm26067-201ENSMUST00000103789 110 ntBASIC5.44□□□□□ -1.54
Trim35Q8C006 Fam122b-202ENSMUST00000114838 3536 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Trim35Q8C006 Gm14521-201ENSMUST00000119545 350 ntBASIC5.44□□□□□ -1.54
Trim35Q8C006 Rps12-ps24-201ENSMUST00000182321 381 ntBASIC5.44□□□□□ -1.54
Trim35Q8C006 Gm43078-201ENSMUST00000197222 168 ntBASIC5.44□□□□□ -1.54
Trim35Q8C006 Gm19256-201ENSMUST00000218550 231 ntBASIC5.44□□□□□ -1.54
Trim35Q8C006 AC155922.1-201ENSMUST00000220100 373 ntBASIC5.44□□□□□ -1.54
Trim35Q8C006 Zfand4-204ENSMUST00000221069 501 ntTSL 3 BASIC5.44□□□□□ -1.54
Trim35Q8C006 AC154636.1-201ENSMUST00000223226 126 ntBASIC5.44□□□□□ -1.54
Trim35Q8C006 Phf11c-201ENSMUST00000166912 3459 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Trim35Q8C006 Gm45039-201ENSMUST00000209181 3477 ntBASIC5.44□□□□□ -1.54
Trim35Q8C006 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Trim35Q8C006 C130073E24Rik-202ENSMUST00000211313 14112 ntTSL 5 BASIC5.44□□□□□ -1.54
Trim35Q8C006 Gm5724-201ENSMUST00000148411 2449 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Trim35Q8C006 Zfp229-203ENSMUST00000182603 4315 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Trim35Q8C006 Tbc1d32-201ENSMUST00000099739 7240 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Trim35Q8C006 Gm31258-201ENSMUST00000194532 3297 ntBASIC5.43□□□□□ -1.54
Trim35Q8C006 Usp46-202ENSMUST00000119154 4738 ntTSL 5 BASIC5.43□□□□□ -1.54
Trim35Q8C006 Gm26767-201ENSMUST00000180936 4476 ntTSL 5 BASIC5.43□□□□□ -1.54
Trim35Q8C006 Ifit2-201ENSMUST00000102826 3818 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Trim35Q8C006 A830019L24Rik-202ENSMUST00000198056 3165 ntTSL 3 BASIC5.43□□□□□ -1.54
Trim35Q8C006 Gm4011-201ENSMUST00000174657 2555 ntBASIC5.43□□□□□ -1.54
Trim35Q8C006 Zfp808-201ENSMUST00000099449 2571 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Trim35Q8C006 Tmem45a2-201ENSMUST00000067173 3073 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
Trim35Q8C006 Hspa13-201ENSMUST00000046283 4069 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Trim35Q8C006 Gm42686-201ENSMUST00000199172 4108 ntBASIC5.43□□□□□ -1.54
Trim35Q8C006 Il12rb2-202ENSMUST00000117441 2600 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Trim35Q8C006 Snora64-201ENSMUST00000104521 134 ntBASIC5.43□□□□□ -1.54
Trim35Q8C006 Gm22796-201ENSMUST00000157234 106 ntBASIC5.43□□□□□ -1.54
Trim35Q8C006 Gm22916-201ENSMUST00000157616 119 ntBASIC5.43□□□□□ -1.54
Trim35Q8C006 Gm28075-201ENSMUST00000189179 354 ntTSL 3 BASIC5.43□□□□□ -1.54
Trim35Q8C006 Gm44921-201ENSMUST00000205290 301 ntBASIC5.43□□□□□ -1.54
Trim35Q8C006 Gm3702-201ENSMUST00000211754 346 ntBASIC5.43□□□□□ -1.54
Trim35Q8C006 Snora41-201ENSMUST00000082668 132 ntBASIC5.43□□□□□ -1.54
Trim35Q8C006 Olfr685-203ENSMUST00000214712 3326 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
Trim35Q8C006 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Trim35Q8C006 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Trim35Q8C006 Usp26-201ENSMUST00000069509 4120 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Trim35Q8C006 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
Trim35Q8C006 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Trim35Q8C006 Zfp101-201ENSMUST00000167107 2735 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Trim35Q8C006 Crebrf-201ENSMUST00000062519 7462 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Trim35Q8C006 Vwa5a-201ENSMUST00000001544 4157 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Trim35Q8C006 Olfr1263-204ENSMUST00000217065 4186 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Trim35Q8C006 Tmc1-201ENSMUST00000039500 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Trim35Q8C006 Olfr457-203ENSMUST00000204324 4275 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
Trim35Q8C006 Rc3h2-202ENSMUST00000112934 8948 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Trim35Q8C006 Slamf7-203ENSMUST00000192195 3975 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
Trim35Q8C006 Olfr653-202ENSMUST00000215585 4765 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Trim35Q8C006 Olfr653-203ENSMUST00000217466 4786 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Trim35Q8C006 Gm42436-201ENSMUST00000198804 3656 ntBASIC5.42□□□□□ -1.54
Trim35Q8C006 Abcb5-201ENSMUST00000035515 3876 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Trim35Q8C006 Gm13757-201ENSMUST00000126038 4460 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
Trim35Q8C006 Slc5a12-202ENSMUST00000111026 3518 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Trim35Q8C006 Nlrp1b-203ENSMUST00000108515 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Trim35Q8C006 Npsr1-201ENSMUST00000059650 3791 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Trim35Q8C006 Gm11966-201ENSMUST00000119907 87 ntBASIC5.42□□□□□ -1.54
Trim35Q8C006 Mir3094-201ENSMUST00000175121 64 ntBASIC5.42□□□□□ -1.54
Trim35Q8C006 Gm21836-201ENSMUST00000178787 63 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Trim35Q8C006 Gm25740-201ENSMUST00000180247 107 ntBASIC5.42□□□□□ -1.54
Trim35Q8C006 Gm5358-201ENSMUST00000212814 353 ntBASIC5.42□□□□□ -1.54
Trim35Q8C006 Olfr800-202ENSMUST00000217094 3831 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
Trim35Q8C006 AC115735.1-201ENSMUST00000226633 350 ntBASIC5.42□□□□□ -1.54
Trim35Q8C006 Gm10064-201ENSMUST00000071235 399 ntBASIC5.42□□□□□ -1.54
Trim35Q8C006 Fxyd3-201ENSMUST00000072331 439 ntTSL 2 BASIC5.42□□□□□ -1.54
Trim35Q8C006 Gm10298-201ENSMUST00000074801 265 ntBASIC5.42□□□□□ -1.54
Trim35Q8C006 Gm22458-201ENSMUST00000082576 107 ntBASIC5.42□□□□□ -1.54
Trim35Q8C006 Gm26493-201ENSMUST00000083155 136 ntBASIC5.42□□□□□ -1.54
Trim35Q8C006 Olfr397-202ENSMUST00000213134 4048 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Trim35Q8C006 Igsf10-202ENSMUST00000193455 8484 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Trim35Q8C006 Gm43130-201ENSMUST00000197721 3907 ntBASIC5.42□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 95.3 ms