Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Gm15268-201ENSMUST00000118845 352 ntBASIC4.38□□□□□ -1.71
Trim56Q80VI1 Gm14838-201ENSMUST00000118913 248 ntBASIC4.38□□□□□ -1.71
Trim56Q80VI1 Gm16327-201ENSMUST00000137146 228 ntBASIC4.38□□□□□ -1.71
Trim56Q80VI1 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Trim56Q80VI1 Gm16218-201ENSMUST00000155424 388 ntBASIC4.38□□□□□ -1.71
Trim56Q80VI1 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
Trim56Q80VI1 Gm17528-201ENSMUST00000171026 239 ntBASIC4.38□□□□□ -1.71
Trim56Q80VI1 Gm17186-201ENSMUST00000171742 456 ntBASIC4.38□□□□□ -1.71
Trim56Q80VI1 Gm37617-201ENSMUST00000194309 159 ntBASIC4.38□□□□□ -1.71
Trim56Q80VI1 Gm32222-201ENSMUST00000203296 298 ntBASIC4.38□□□□□ -1.71
Trim56Q80VI1 Gm4036-201ENSMUST00000220842 626 ntBASIC4.38□□□□□ -1.71
Trim56Q80VI1 Gm25078-201ENSMUST00000082530 107 ntBASIC4.38□□□□□ -1.71
Trim56Q80VI1 Gm22685-201ENSMUST00000082848 106 ntBASIC4.38□□□□□ -1.71
Trim56Q80VI1 Gm23042-201ENSMUST00000083866 101 ntBASIC4.38□□□□□ -1.71
Trim56Q80VI1 Gm10811-201ENSMUST00000221985 2448 ntBASIC4.38□□□□□ -1.71
Trim56Q80VI1 Olfr164-202ENSMUST00000216157 2792 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Trim56Q80VI1 Olfr1012-202ENSMUST00000214255 3115 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Trim56Q80VI1 Gm43705-201ENSMUST00000195958 3717 ntBASIC4.38□□□□□ -1.71
Trim56Q80VI1 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Trim56Q80VI1 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC4.38□□□□□ -1.71
Trim56Q80VI1 Gm3623-201ENSMUST00000173643 2747 ntBASIC4.37□□□□□ -1.71
Trim56Q80VI1 Cubn-201ENSMUST00000091436 11262 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Trim56Q80VI1 Gm45093-201ENSMUST00000206859 2463 ntBASIC4.37□□□□□ -1.71
Trim56Q80VI1 AC124572.2-201ENSMUST00000218041 5152 ntBASIC4.37□□□□□ -1.71
Trim56Q80VI1 Olfr1111-202ENSMUST00000214492 1616 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Trim56Q80VI1 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Trim56Q80VI1 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Trim56Q80VI1 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC4.37□□□□□ -1.71
Trim56Q80VI1 Gm22447-201ENSMUST00000158155 92 ntBASIC4.37□□□□□ -1.71
Trim56Q80VI1 Gm22840-201ENSMUST00000158444 136 ntBASIC4.37□□□□□ -1.71
Trim56Q80VI1 Mir6385-201ENSMUST00000184295 105 ntBASIC4.37□□□□□ -1.71
Trim56Q80VI1 Gm29657-201ENSMUST00000189807 342 ntBASIC4.37□□□□□ -1.71
Trim56Q80VI1 Gm38088-201ENSMUST00000195829 241 ntBASIC4.37□□□□□ -1.71
Trim56Q80VI1 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC4.37□□□□□ -1.71
Trim56Q80VI1 Gm7041-201ENSMUST00000201227 524 ntBASIC4.37□□□□□ -1.71
Trim56Q80VI1 Gm44030-201ENSMUST00000204865 432 ntBASIC4.37□□□□□ -1.71
Trim56Q80VI1 AC123803.1-201ENSMUST00000216093 189 ntBASIC4.37□□□□□ -1.71
Trim56Q80VI1 Gm18921-201ENSMUST00000221798 366 ntBASIC4.37□□□□□ -1.71
Trim56Q80VI1 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC4.37□□□□□ -1.71
Trim56Q80VI1 Gm9795-201ENSMUST00000062156 693 ntBASIC4.37□□□□□ -1.71
Trim56Q80VI1 Gm25205-201ENSMUST00000082841 103 ntBASIC4.37□□□□□ -1.71
Trim56Q80VI1 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Trim56Q80VI1 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
Trim56Q80VI1 Vmn1r62-201ENSMUST00000173956 1757 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Trim56Q80VI1 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC4.37□□□□□ -1.71
Trim56Q80VI1 Pkhd1l1-203ENSMUST00000209244 12949 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Trim56Q80VI1 Cyp3a13-201ENSMUST00000031741 2956 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Trim56Q80VI1 AC154634.4-201ENSMUST00000226077 2665 ntBASIC4.36□□□□□ -1.71
Trim56Q80VI1 Gm24581-201ENSMUST00000103962 133 ntBASIC4.36□□□□□ -1.71
Trim56Q80VI1 Gm26075-201ENSMUST00000104062 121 ntBASIC4.36□□□□□ -1.71
Trim56Q80VI1 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC4.36□□□□□ -1.71
Trim56Q80VI1 Gm11874-201ENSMUST00000117437 130 ntBASIC4.36□□□□□ -1.71
Trim56Q80VI1 Ifna-ps1-201ENSMUST00000119856 555 ntBASIC4.36□□□□□ -1.71
Trim56Q80VI1 Gm16005-201ENSMUST00000120515 269 ntBASIC4.36□□□□□ -1.71
Trim56Q80VI1 Gm12617-201ENSMUST00000121268 381 ntBASIC4.36□□□□□ -1.71
Trim56Q80VI1 n-R5s216-201ENSMUST00000122755 112 ntBASIC4.36□□□□□ -1.71
Trim56Q80VI1 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC4.36□□□□□ -1.71
Trim56Q80VI1 Gm25456-201ENSMUST00000157952 109 ntBASIC4.36□□□□□ -1.71
Trim56Q80VI1 Gm23350-201ENSMUST00000158429 103 ntBASIC4.36□□□□□ -1.71
Trim56Q80VI1 Gm26287-201ENSMUST00000158887 81 ntBASIC4.36□□□□□ -1.71
Trim56Q80VI1 Gm22118-201ENSMUST00000175593 171 ntBASIC4.36□□□□□ -1.71
Trim56Q80VI1 Gm20692-201ENSMUST00000177251 681 ntTSL 3 BASIC4.36□□□□□ -1.71
Trim56Q80VI1 AC155715.1-201ENSMUST00000213575 463 ntBASIC4.36□□□□□ -1.71
Trim56Q80VI1 Gm25698-201ENSMUST00000082897 107 ntBASIC4.36□□□□□ -1.71
Trim56Q80VI1 Gm45884-201ENSMUST00000209540 3416 ntBASIC4.36□□□□□ -1.71
Trim56Q80VI1 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
Trim56Q80VI1 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Trim56Q80VI1 Gm43658-201ENSMUST00000202348 4176 ntBASIC4.36□□□□□ -1.71
Trim56Q80VI1 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Trim56Q80VI1 Tfpi-202ENSMUST00000090732 3576 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Trim56Q80VI1 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
Trim56Q80VI1 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
Trim56Q80VI1 Gm44120-201ENSMUST00000203022 3023 ntBASIC4.35□□□□□ -1.71
Trim56Q80VI1 Gm38265-201ENSMUST00000193479 3766 ntBASIC4.35□□□□□ -1.71
Trim56Q80VI1 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Trim56Q80VI1 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
Trim56Q80VI1 Mir294-201ENSMUST00000104710 84 ntBASIC4.35□□□□□ -1.71
Trim56Q80VI1 Gm15002-201ENSMUST00000118406 452 ntBASIC4.35□□□□□ -1.71
Trim56Q80VI1 Gm13581-201ENSMUST00000120675 278 ntBASIC4.35□□□□□ -1.71
Trim56Q80VI1 Gm26187-201ENSMUST00000157693 101 ntBASIC4.35□□□□□ -1.71
Trim56Q80VI1 Gm22501-201ENSMUST00000158981 127 ntBASIC4.35□□□□□ -1.71
Trim56Q80VI1 Gm25817-201ENSMUST00000177758 121 ntBASIC4.35□□□□□ -1.71
Trim56Q80VI1 Gm24766-201ENSMUST00000179182 121 ntBASIC4.35□□□□□ -1.71
Trim56Q80VI1 Gm27733-201ENSMUST00000184803 68 ntBASIC4.35□□□□□ -1.71
Trim56Q80VI1 Gm19123-201ENSMUST00000190716 651 ntBASIC4.35□□□□□ -1.71
Trim56Q80VI1 Gm5829-201ENSMUST00000191383 351 ntBASIC4.35□□□□□ -1.71
Trim56Q80VI1 AC155921.1-201ENSMUST00000216568 3841 ntBASIC4.35□□□□□ -1.71
Trim56Q80VI1 AC113291.1-201ENSMUST00000217557 403 ntTSL 3 BASIC4.35□□□□□ -1.71
Trim56Q80VI1 Gm7422-201ENSMUST00000220115 640 ntBASIC4.35□□□□□ -1.71
Trim56Q80VI1 Snord21-201ENSMUST00000082519 94 ntBASIC4.35□□□□□ -1.71
Trim56Q80VI1 Mir32-201ENSMUST00000083610 70 ntBASIC4.35□□□□□ -1.71
Trim56Q80VI1 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Trim56Q80VI1 Olfr1251-201ENSMUST00000214304 3133 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Trim56Q80VI1 Klhl13-205ENSMUST00000115319 3349 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
Trim56Q80VI1 Vmn2r-ps45-201ENSMUST00000174138 2435 ntBASIC4.35□□□□□ -1.71
Trim56Q80VI1 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Trim56Q80VI1 Olfr1028-201ENSMUST00000080698 3474 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Trim56Q80VI1 Gm5596-201ENSMUST00000207988 2421 ntBASIC4.34□□□□□ -1.71
Trim56Q80VI1 Olfr392-201ENSMUST00000118463 3643 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
Trim56Q80VI1 Mir465b-1-201ENSMUST00000103940 79 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 83.8 ms