Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Gm22973-201ENSMUST00000083298 191 ntBASIC4.07□□□□□ -1.76
Trim28Q62318 Gm22740-201ENSMUST00000083439 109 ntBASIC4.07□□□□□ -1.76
Trim28Q62318 Olfr235-203ENSMUST00000214551 2240 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Trim28Q62318 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Trim28Q62318 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
Trim28Q62318 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Trim28Q62318 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Trim28Q62318 Vmn2r101-201ENSMUST00000171914 2574 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Trim28Q62318 A230057D06Rik-202ENSMUST00000207061 3717 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Trim28Q62318 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
Trim28Q62318 Vmn1r46-204ENSMUST00000228231 13338 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Trim28Q62318 Gm25168-201ENSMUST00000104189 132 ntBASIC4.06□□□□□ -1.76
Trim28Q62318 Gm25376-201ENSMUST00000104340 133 ntBASIC4.06□□□□□ -1.76
Trim28Q62318 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Trim28Q62318 Gm13443-201ENSMUST00000120770 555 ntBASIC4.06□□□□□ -1.76
Trim28Q62318 Gm15986-201ENSMUST00000122153 400 ntBASIC4.06□□□□□ -1.76
Trim28Q62318 Gm25384-201ENSMUST00000157807 105 ntBASIC4.06□□□□□ -1.76
Trim28Q62318 Mir8096-201ENSMUST00000184526 127 ntBASIC4.06□□□□□ -1.76
Trim28Q62318 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC4.06□□□□□ -1.76
Trim28Q62318 Gm38183-201ENSMUST00000193189 205 ntBASIC4.06□□□□□ -1.76
Trim28Q62318 Gm19177-201ENSMUST00000204520 613 ntBASIC4.06□□□□□ -1.76
Trim28Q62318 Gm45252-201ENSMUST00000211579 397 ntBASIC4.06□□□□□ -1.76
Trim28Q62318 Gm45879-201ENSMUST00000212521 392 ntBASIC4.06□□□□□ -1.76
Trim28Q62318 AC129017.1-201ENSMUST00000228363 270 ntBASIC4.06□□□□□ -1.76
Trim28Q62318 Gm25202-201ENSMUST00000082838 191 ntBASIC4.06□□□□□ -1.76
Trim28Q62318 Snord47-201ENSMUST00000083034 77 ntBASIC4.06□□□□□ -1.76
Trim28Q62318 Olfr111-203ENSMUST00000215424 2548 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Trim28Q62318 Mgat4c-212ENSMUST00000179929 4272 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Trim28Q62318 Olfr1205-202ENSMUST00000215929 6149 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
Trim28Q62318 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
Trim28Q62318 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Trim28Q62318 Mir743b-201ENSMUST00000104751 77 ntBASIC4.05□□□□□ -1.76
Trim28Q62318 Gm14774-201ENSMUST00000117857 536 ntBASIC4.05□□□□□ -1.76
Trim28Q62318 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC4.05□□□□□ -1.76
Trim28Q62318 Gm4479-201ENSMUST00000178807 171 ntBASIC4.05□□□□□ -1.76
Trim28Q62318 Gm23966-201ENSMUST00000179823 107 ntBASIC4.05□□□□□ -1.76
Trim28Q62318 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC4.05□□□□□ -1.76
Trim28Q62318 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC4.05□□□□□ -1.76
Trim28Q62318 Gm24350-202ENSMUST00000198309 132 ntBASIC4.05□□□□□ -1.76
Trim28Q62318 Igkv1-115-201ENSMUST00000198714 302 ntBASIC4.05□□□□□ -1.76
Trim28Q62318 Gm43746-201ENSMUST00000200028 317 ntBASIC4.05□□□□□ -1.76
Trim28Q62318 Gm7652-201ENSMUST00000200440 1151 ntBASIC4.05□□□□□ -1.76
Trim28Q62318 Gm25801-201ENSMUST00000082638 106 ntBASIC4.05□□□□□ -1.76
Trim28Q62318 Mir184-201ENSMUST00000083662 69 ntBASIC4.05□□□□□ -1.76
Trim28Q62318 Olfr1216-203ENSMUST00000217000 3667 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Trim28Q62318 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Trim28Q62318 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Trim28Q62318 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Trim28Q62318 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
Trim28Q62318 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
Trim28Q62318 Gm43032-201ENSMUST00000197967 3123 ntBASIC4.04□□□□□ -1.76
Trim28Q62318 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Trim28Q62318 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Trim28Q62318 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC4.04□□□□□ -1.76
Trim28Q62318 Gm14566-201ENSMUST00000118915 321 ntBASIC4.04□□□□□ -1.76
Trim28Q62318 Gm14775-201ENSMUST00000122089 310 ntBASIC4.04□□□□□ -1.76
Trim28Q62318 Gm13725-201ENSMUST00000122139 207 ntBASIC4.04□□□□□ -1.76
Trim28Q62318 Gm24787-201ENSMUST00000157380 123 ntBASIC4.04□□□□□ -1.76
Trim28Q62318 Gm26348-201ENSMUST00000157528 240 ntBASIC4.04□□□□□ -1.76
Trim28Q62318 Gm23078-201ENSMUST00000157848 148 ntBASIC4.04□□□□□ -1.76
Trim28Q62318 Gm20651-201ENSMUST00000177219 329 ntBASIC4.04□□□□□ -1.76
Trim28Q62318 Gm26622-201ENSMUST00000180520 298 ntBASIC4.04□□□□□ -1.76
Trim28Q62318 Gm26585-201ENSMUST00000180890 630 ntBASIC4.04□□□□□ -1.76
Trim28Q62318 Gm7909-201ENSMUST00000182688 614 ntBASIC4.04□□□□□ -1.76
Trim28Q62318 Gm27521-201ENSMUST00000184022 64 ntBASIC4.04□□□□□ -1.76
Trim28Q62318 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC4.04□□□□□ -1.76
Trim28Q62318 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC4.04□□□□□ -1.76
Trim28Q62318 Igkv13-64-201ENSMUST00000198143 343 ntBASIC4.04□□□□□ -1.76
Trim28Q62318 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Trim28Q62318 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC4.04□□□□□ -1.76
Trim28Q62318 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC4.04□□□□□ -1.76
Trim28Q62318 Gm45704-201ENSMUST00000212582 403 ntBASIC4.04□□□□□ -1.76
Trim28Q62318 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Trim28Q62318 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Trim28Q62318 Vmn2r78-201ENSMUST00000170835 2611 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Trim28Q62318 BC051076-202ENSMUST00000199477 2868 ntBASIC4.03□□□□□ -1.76
Trim28Q62318 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC4.03□□□□□ -1.76
Trim28Q62318 Gm23747-201ENSMUST00000104228 131 ntBASIC4.03□□□□□ -1.76
Trim28Q62318 Gm12042-201ENSMUST00000120479 301 ntBASIC4.03□□□□□ -1.76
Trim28Q62318 Gm14915-201ENSMUST00000120747 204 ntBASIC4.03□□□□□ -1.76
Trim28Q62318 Gm14287-201ENSMUST00000121060 117 ntBASIC4.03□□□□□ -1.76
Trim28Q62318 Gm23277-201ENSMUST00000157914 136 ntBASIC4.03□□□□□ -1.76
Trim28Q62318 Gm26041-201ENSMUST00000158148 108 ntBASIC4.03□□□□□ -1.76
Trim28Q62318 Gm26400-201ENSMUST00000175012 85 ntBASIC4.03□□□□□ -1.76
Trim28Q62318 Gm25361-201ENSMUST00000179358 76 ntBASIC4.03□□□□□ -1.76
Trim28Q62318 Gm28399-201ENSMUST00000186221 318 ntBASIC4.03□□□□□ -1.76
Trim28Q62318 Gm28572-201ENSMUST00000187444 318 ntBASIC4.03□□□□□ -1.76
Trim28Q62318 Gm19498-201ENSMUST00000191128 331 ntBASIC4.03□□□□□ -1.76
Trim28Q62318 Gm18540-201ENSMUST00000204025 526 ntBASIC4.03□□□□□ -1.76
Trim28Q62318 Gm45678-201ENSMUST00000210509 295 ntBASIC4.03□□□□□ -1.76
Trim28Q62318 Gm45859-201ENSMUST00000212794 214 ntBASIC4.03□□□□□ -1.76
Trim28Q62318 AC153887.2-201ENSMUST00000219160 3838 ntBASIC4.03□□□□□ -1.76
Trim28Q62318 AC159203.2-201ENSMUST00000221326 193 ntBASIC4.03□□□□□ -1.76
Trim28Q62318 Gm22577-201ENSMUST00000083731 109 ntBASIC4.03□□□□□ -1.76
Trim28Q62318 Gm25207-201ENSMUST00000093745 107 ntBASIC4.03□□□□□ -1.76
Trim28Q62318 Gm37970-201ENSMUST00000193865 1732 ntBASIC4.03□□□□□ -1.76
Trim28Q62318 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Trim28Q62318 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Trim28Q62318 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC4.02□□□□□ -1.77
Trim28Q62318 Gm15084-201ENSMUST00000178585 1502 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 126.2 ms