Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 AC134254.5-201ENSMUST00000223436 400 ntBASIC1.43□□□□□ -2.18
Col11a1Q61245 AC101945.1-201ENSMUST00000226734 466 ntBASIC1.43□□□□□ -2.18
Col11a1Q61245 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
Col11a1Q61245 Spinkl-201ENSMUST00000066328 593 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
Col11a1Q61245 Gm14406-202ENSMUST00000108945 1348 ntAPPRIS P1 TSL 3 BASIC1.42□□□□□ -2.18
Col11a1Q61245 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
Col11a1Q61245 Gm14894-201ENSMUST00000117170 270 ntBASIC1.42□□□□□ -2.18
Col11a1Q61245 Gm14238-201ENSMUST00000120227 323 ntBASIC1.42□□□□□ -2.18
Col11a1Q61245 Gm23754-201ENSMUST00000157576 63 ntBASIC1.42□□□□□ -2.18
Col11a1Q61245 Gm15680-201ENSMUST00000161597 465 ntTSL 5 BASIC1.42□□□□□ -2.18
Col11a1Q61245 Spanxn4-201ENSMUST00000172433 424 ntBASIC1.42□□□□□ -2.18
Col11a1Q61245 Gm23053-201ENSMUST00000175136 96 ntBASIC1.42□□□□□ -2.18
Col11a1Q61245 Gm37449-201ENSMUST00000193016 270 ntBASIC1.42□□□□□ -2.18
Col11a1Q61245 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC1.42□□□□□ -2.18
Col11a1Q61245 Gm18658-201ENSMUST00000195558 270 ntBASIC1.42□□□□□ -2.18
Col11a1Q61245 Gm44058-201ENSMUST00000204335 467 ntBASIC1.42□□□□□ -2.18
Col11a1Q61245 Gm29920-201ENSMUST00000206876 754 ntBASIC1.42□□□□□ -2.18
Col11a1Q61245 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC1.42□□□□□ -2.18
Col11a1Q61245 AC147545.1-201ENSMUST00000227528 108 ntBASIC1.42□□□□□ -2.18
Col11a1Q61245 AC168062.2-201ENSMUST00000228907 422 ntBASIC1.42□□□□□ -2.18
Col11a1Q61245 Olfr727-201ENSMUST00000079142 1035 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
Col11a1Q61245 Mir466n-201ENSMUST00000104798 94 ntBASIC1.41□□□□□ -2.18
Col11a1Q61245 Gm14751-201ENSMUST00000117693 222 ntBASIC1.41□□□□□ -2.18
Col11a1Q61245 Gm14903-201ENSMUST00000122435 537 ntBASIC1.41□□□□□ -2.18
Col11a1Q61245 Gm2830-201ENSMUST00000140330 385 ntBASIC1.41□□□□□ -2.18
Col11a1Q61245 Gm23469-201ENSMUST00000157131 104 ntBASIC1.41□□□□□ -2.18
Col11a1Q61245 Gm24288-201ENSMUST00000157630 144 ntBASIC1.41□□□□□ -2.18
Col11a1Q61245 Gm3221-201ENSMUST00000164869 440 ntBASIC1.41□□□□□ -2.18
Col11a1Q61245 Vmn1r-ps152-201ENSMUST00000176452 699 ntBASIC1.41□□□□□ -2.18
Col11a1Q61245 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
Col11a1Q61245 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC1.41□□□□□ -2.18
Col11a1Q61245 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC1.41□□□□□ -2.18
Col11a1Q61245 1810007C17Rik-201ENSMUST00000187665 710 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
Col11a1Q61245 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC1.41□□□□□ -2.18
Col11a1Q61245 Gm46194-201ENSMUST00000218136 320 ntBASIC1.41□□□□□ -2.18
Col11a1Q61245 AC154636.3-201ENSMUST00000221489 1214 ntBASIC1.41□□□□□ -2.18
Col11a1Q61245 Gm35558-202ENSMUST00000221819 499 ntBASIC1.41□□□□□ -2.18
Col11a1Q61245 AC192616.1-201ENSMUST00000221922 132 ntBASIC1.41□□□□□ -2.18
Col11a1Q61245 Olfr853-201ENSMUST00000058296 918 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
Col11a1Q61245 Gm16261-201ENSMUST00000096813 205 ntBASIC1.41□□□□□ -2.18
Col11a1Q61245 Gm17976-201ENSMUST00000184037 1909 ntBASIC1.41□□□□□ -2.18
Col11a1Q61245 Gm44708-201ENSMUST00000205580 2237 ntBASIC1.41□□□□□ -2.18
Col11a1Q61245 Gm42862-201ENSMUST00000197494 2621 ntBASIC1.4□□□□□ -2.18
Col11a1Q61245 Gm25506-201ENSMUST00000104339 70 ntBASIC1.4□□□□□ -2.18
Col11a1Q61245 Gm6923-201ENSMUST00000118343 406 ntBASIC1.4□□□□□ -2.18
Col11a1Q61245 Gm13941-201ENSMUST00000127918 736 ntAPPRIS P1 TSL 3 BASIC1.4□□□□□ -2.18
Col11a1Q61245 Gm23893-201ENSMUST00000158106 134 ntBASIC1.4□□□□□ -2.18
Col11a1Q61245 Gm25715-201ENSMUST00000158627 125 ntBASIC1.4□□□□□ -2.18
Col11a1Q61245 Gm24813-201ENSMUST00000175310 84 ntBASIC1.4□□□□□ -2.18
Col11a1Q61245 Gm21894-201ENSMUST00000179631 546 ntBASIC1.4□□□□□ -2.18
Col11a1Q61245 Gm27755-201ENSMUST00000184623 132 ntBASIC1.4□□□□□ -2.18
Col11a1Q61245 Gm20896-202ENSMUST00000188585 921 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.18
Col11a1Q61245 Npn2-202ENSMUST00000189275 235 ntBASIC1.4□□□□□ -2.18
Col11a1Q61245 Gm28552-201ENSMUST00000190725 388 ntBASIC1.4□□□□□ -2.18
Col11a1Q61245 Gm37026-201ENSMUST00000191917 535 ntTSL 5 BASIC1.4□□□□□ -2.18
Col11a1Q61245 Gm38149-201ENSMUST00000191943 339 ntBASIC1.4□□□□□ -2.18
Col11a1Q61245 Gm37801-201ENSMUST00000194754 274 ntBASIC1.4□□□□□ -2.18
Col11a1Q61245 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC1.4□□□□□ -2.18
Col11a1Q61245 Gm44274-201ENSMUST00000203417 256 ntBASIC1.4□□□□□ -2.18
Col11a1Q61245 Gm18645-201ENSMUST00000209593 651 ntBASIC1.4□□□□□ -2.18
Col11a1Q61245 Gm45868-201ENSMUST00000210247 473 ntTSL 3 BASIC1.4□□□□□ -2.18
Col11a1Q61245 Olfr850-202ENSMUST00000211832 947 ntAPPRIS ALT2 BASIC1.4□□□□□ -2.18
Col11a1Q61245 AC152951.1-201ENSMUST00000218907 266 ntBASIC1.4□□□□□ -2.18
Col11a1Q61245 AC154552.4-201ENSMUST00000222171 151 ntBASIC1.4□□□□□ -2.18
Col11a1Q61245 AC167977.2-201ENSMUST00000225676 682 ntBASIC1.4□□□□□ -2.18
Col11a1Q61245 AC133176.1-201ENSMUST00000226668 219 ntBASIC1.4□□□□□ -2.18
Col11a1Q61245 Tas2r107-201ENSMUST00000065781 1032 ntAPPRIS P1 BASIC1.4□□□□□ -2.18
Col11a1Q61245 Gm24151-201ENSMUST00000082758 141 ntBASIC1.4□□□□□ -2.18
Col11a1Q61245 Gm24921-201ENSMUST00000083024 107 ntBASIC1.4□□□□□ -2.18
Col11a1Q61245 Olfr987-203ENSMUST00000216347 1453 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
Col11a1Q61245 Gm23691-201ENSMUST00000101878 107 ntBASIC1.4□□□□□ -2.19
Col11a1Q61245 Gm6664-201ENSMUST00000119138 468 ntBASIC1.4□□□□□ -2.19
Col11a1Q61245 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC1.4□□□□□ -2.19
Col11a1Q61245 Gm24632-201ENSMUST00000122770 323 ntBASIC1.4□□□□□ -2.19
Col11a1Q61245 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC1.4□□□□□ -2.19
Col11a1Q61245 Gm21858-201ENSMUST00000177834 498 ntTSL 5 BASIC1.4□□□□□ -2.19
Col11a1Q61245 Gm26701-201ENSMUST00000181571 234 ntBASIC1.4□□□□□ -2.19
Col11a1Q61245 Gm29288-201ENSMUST00000191582 901 ntBASIC1.4□□□□□ -2.19
Col11a1Q61245 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC1.4□□□□□ -2.19
Col11a1Q61245 Gm43004-201ENSMUST00000201872 703 ntBASIC1.4□□□□□ -2.19
Col11a1Q61245 Gm18410-201ENSMUST00000207199 577 ntBASIC1.4□□□□□ -2.19
Col11a1Q61245 Gm9068-201ENSMUST00000217393 455 ntBASIC1.4□□□□□ -2.19
Col11a1Q61245 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC1.4□□□□□ -2.19
Col11a1Q61245 Olfr1193-201ENSMUST00000081697 957 ntBASIC1.4□□□□□ -2.19
Col11a1Q61245 Gm26439-201ENSMUST00000082592 106 ntBASIC1.4□□□□□ -2.19
Col11a1Q61245 Gm43498-201ENSMUST00000202002 1486 ntBASIC1.4□□□□□ -2.19
Col11a1Q61245 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC1.39□□□□□ -2.19
Col11a1Q61245 Mir19b-1-201ENSMUST00000102301 87 ntBASIC1.39□□□□□ -2.19
Col11a1Q61245 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC1.39□□□□□ -2.19
Col11a1Q61245 Gm13731-201ENSMUST00000117332 196 ntBASIC1.39□□□□□ -2.19
Col11a1Q61245 Gm15563-201ENSMUST00000124953 410 ntTSL 3 BASIC1.39□□□□□ -2.19
Col11a1Q61245 Gm11583-201ENSMUST00000132296 466 ntTSL 5 BASIC1.39□□□□□ -2.19
Col11a1Q61245 Gm16363-201ENSMUST00000132460 877 ntBASIC1.39□□□□□ -2.19
Col11a1Q61245 Vmn1r-ps27-201ENSMUST00000174619 985 ntBASIC1.39□□□□□ -2.19
Col11a1Q61245 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC1.39□□□□□ -2.19
Col11a1Q61245 Gm5731-201ENSMUST00000190969 481 ntBASIC1.39□□□□□ -2.19
Col11a1Q61245 Gm35262-201ENSMUST00000215133 267 ntBASIC1.39□□□□□ -2.19
Col11a1Q61245 Gm18252-203ENSMUST00000215855 757 ntBASIC1.39□□□□□ -2.19
Col11a1Q61245 Gm46103-201ENSMUST00000217614 341 ntBASIC1.39□□□□□ -2.19
Col11a1Q61245 Olfr1161-201ENSMUST00000054845 1012 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 93.5 ms