Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC4.61□□□□□ -1.67
Cln3Q61124 AC159252.1-201ENSMUST00000224450 553 ntBASIC4.61□□□□□ -1.67
Cln3Q61124 Mir323-201ENSMUST00000083683 86 ntBASIC4.61□□□□□ -1.67
Cln3Q61124 Gm22155-201ENSMUST00000083836 162 ntBASIC4.61□□□□□ -1.67
Cln3Q61124 Gm7135-202ENSMUST00000191257 1905 ntBASIC4.61□□□□□ -1.67
Cln3Q61124 Zfp595-201ENSMUST00000109735 3896 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
Cln3Q61124 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Cln3Q61124 Gprc6a-201ENSMUST00000020062 2856 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
Cln3Q61124 Gm19744-204ENSMUST00000188936 4533 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Cln3Q61124 AC154462.1-201ENSMUST00000228897 2260 ntBASIC4.61□□□□□ -1.67
Cln3Q61124 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Cln3Q61124 Rnf213-201ENSMUST00000093902 16716 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
Cln3Q61124 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
Cln3Q61124 4931408C20Rik-201ENSMUST00000097801 4318 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Cln3Q61124 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Cln3Q61124 Cntn6-205ENSMUST00000162872 3467 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Cln3Q61124 Vmn1r169-202ENSMUST00000226669 2326 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Cln3Q61124 Gm26019-201ENSMUST00000104407 119 ntBASIC4.6□□□□□ -1.67
Cln3Q61124 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Cln3Q61124 Gm8840-201ENSMUST00000122454 386 ntBASIC4.6□□□□□ -1.67
Cln3Q61124 Gm22792-201ENSMUST00000157225 133 ntBASIC4.6□□□□□ -1.67
Cln3Q61124 Gm23121-201ENSMUST00000157653 173 ntBASIC4.6□□□□□ -1.67
Cln3Q61124 Gm22476-201ENSMUST00000158902 100 ntBASIC4.6□□□□□ -1.67
Cln3Q61124 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Cln3Q61124 Gm44182-201ENSMUST00000204052 115 ntBASIC4.6□□□□□ -1.67
Cln3Q61124 Gm35405-201ENSMUST00000218754 400 ntBASIC4.6□□□□□ -1.67
Cln3Q61124 Gm23510-201ENSMUST00000083083 163 ntBASIC4.6□□□□□ -1.67
Cln3Q61124 Vmn1r214-203ENSMUST00000227652 3906 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Cln3Q61124 Olfr107-205ENSMUST00000216844 4021 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Cln3Q61124 Vmn2r32-201ENSMUST00000094866 3513 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Cln3Q61124 Ccnb3-202ENSMUST00000115752 4554 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Cln3Q61124 Nexn-212ENSMUST00000199470 2392 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
Cln3Q61124 Vmn1r202-202ENSMUST00000228020 5441 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Cln3Q61124 Olfr148-202ENSMUST00000216801 2775 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Cln3Q61124 Olfr362-202ENSMUST00000213817 4059 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Cln3Q61124 Zfp981-201ENSMUST00000105735 3038 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
Cln3Q61124 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC4.59□□□□□ -1.67
Cln3Q61124 Gm11334-201ENSMUST00000121969 156 ntBASIC4.59□□□□□ -1.67
Cln3Q61124 Gm23713-201ENSMUST00000157353 70 ntBASIC4.59□□□□□ -1.67
Cln3Q61124 Gm23536-201ENSMUST00000157541 134 ntBASIC4.59□□□□□ -1.67
Cln3Q61124 Gm22966-201ENSMUST00000157957 129 ntBASIC4.59□□□□□ -1.67
Cln3Q61124 Gm24850-201ENSMUST00000158029 119 ntBASIC4.59□□□□□ -1.67
Cln3Q61124 Gm22615-201ENSMUST00000158102 70 ntBASIC4.59□□□□□ -1.67
Cln3Q61124 Gm24666-201ENSMUST00000158937 167 ntBASIC4.59□□□□□ -1.67
Cln3Q61124 Mir21b-201ENSMUST00000184317 108 ntBASIC4.59□□□□□ -1.67
Cln3Q61124 Gm29408-201ENSMUST00000187536 216 ntBASIC4.59□□□□□ -1.67
Cln3Q61124 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC4.59□□□□□ -1.67
Cln3Q61124 Gm38088-201ENSMUST00000195829 241 ntBASIC4.59□□□□□ -1.67
Cln3Q61124 Gm18015-201ENSMUST00000214879 316 ntBASIC4.59□□□□□ -1.67
Cln3Q61124 Olfr901-203ENSMUST00000216644 2731 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Cln3Q61124 Gm17829-201ENSMUST00000219782 344 ntBASIC4.59□□□□□ -1.67
Cln3Q61124 Polk-205ENSMUST00000221899 2319 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
Cln3Q61124 AL590503.1-201ENSMUST00000222053 321 ntBASIC4.59□□□□□ -1.67
Cln3Q61124 Klhl28-203ENSMUST00000222508 6459 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Cln3Q61124 AC165106.2-201ENSMUST00000226749 97 ntBASIC4.59□□□□□ -1.67
Cln3Q61124 AC165415.1-201ENSMUST00000228924 273 ntBASIC4.59□□□□□ -1.67
Cln3Q61124 Gm597-201ENSMUST00000059937 2887 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Cln3Q61124 Xirp2-201ENSMUST00000028410 11955 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Cln3Q61124 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.68
Cln3Q61124 Inpp4b-209ENSMUST00000172031 8067 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.68
Cln3Q61124 C2cd6-201ENSMUST00000097080 2131 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
Cln3Q61124 Gm43009-201ENSMUST00000199979 3566 ntBASIC4.58□□□□□ -1.68
Cln3Q61124 Gm45804-201ENSMUST00000212137 3435 ntBASIC4.58□□□□□ -1.68
Cln3Q61124 Gm45137-201ENSMUST00000208652 4415 ntBASIC4.58□□□□□ -1.68
Cln3Q61124 Cd28-201ENSMUST00000027165 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Cln3Q61124 Olfr1316-202ENSMUST00000213696 4184 ntAPPRIS ALT1 TSL 5 BASIC4.58□□□□□ -1.68
Cln3Q61124 Xirp2-202ENSMUST00000112347 11979 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Cln3Q61124 Rpl38-ps2-201ENSMUST00000117356 213 ntBASIC4.58□□□□□ -1.68
Cln3Q61124 Gm8129-201ENSMUST00000118230 213 ntBASIC4.58□□□□□ -1.68
Cln3Q61124 Gm12926-201ENSMUST00000121158 409 ntBASIC4.58□□□□□ -1.68
Cln3Q61124 Gm13797-201ENSMUST00000121792 120 ntBASIC4.58□□□□□ -1.68
Cln3Q61124 Gm22139-201ENSMUST00000158747 105 ntBASIC4.58□□□□□ -1.68
Cln3Q61124 Gm16546-201ENSMUST00000159442 355 ntBASIC4.58□□□□□ -1.68
Cln3Q61124 Gm25817-201ENSMUST00000177758 121 ntBASIC4.58□□□□□ -1.68
Cln3Q61124 Gm24766-201ENSMUST00000179182 121 ntBASIC4.58□□□□□ -1.68
Cln3Q61124 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Cln3Q61124 Gm37791-201ENSMUST00000195081 286 ntBASIC4.58□□□□□ -1.68
Cln3Q61124 Gm18502-201ENSMUST00000218679 199 ntBASIC4.58□□□□□ -1.68
Cln3Q61124 Gm4036-201ENSMUST00000220842 626 ntBASIC4.58□□□□□ -1.68
Cln3Q61124 CU062626.2-201ENSMUST00000223953 274 ntBASIC4.58□□□□□ -1.68
Cln3Q61124 CT009713.4-201ENSMUST00000224246 272 ntBASIC4.58□□□□□ -1.68
Cln3Q61124 CT009711.3-201ENSMUST00000225882 250 ntBASIC4.58□□□□□ -1.68
Cln3Q61124 4930579C12Rik-202ENSMUST00000187015 3676 ntTSL 2 BASIC4.58□□□□□ -1.68
Cln3Q61124 Cybb-201ENSMUST00000015484 4752 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Cln3Q61124 Fam169a-202ENSMUST00000169863 6013 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Cln3Q61124 Klhl15-204ENSMUST00000113915 6241 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Cln3Q61124 Zfp799-201ENSMUST00000179695 5833 ntTSL 3 BASIC4.57□□□□□ -1.68
Cln3Q61124 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Cln3Q61124 Rgs5-201ENSMUST00000027997 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Cln3Q61124 Elavl4-204ENSMUST00000106598 3997 ntAPPRIS ALT1 TSL 5 BASIC4.57□□□□□ -1.68
Cln3Q61124 Cp-203ENSMUST00000108325 3183 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
Cln3Q61124 Vmn1r169-203ENSMUST00000227547 2322 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Cln3Q61124 Gm4736-201ENSMUST00000100870 380 ntBASIC4.57□□□□□ -1.68
Cln3Q61124 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Cln3Q61124 Gm15714-201ENSMUST00000117168 250 ntBASIC4.57□□□□□ -1.68
Cln3Q61124 Gm13386-201ENSMUST00000117677 124 ntBASIC4.57□□□□□ -1.68
Cln3Q61124 Gm43735-201ENSMUST00000198245 809 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Cln3Q61124 Gm17887-201ENSMUST00000200194 547 ntBASIC4.57□□□□□ -1.68
Cln3Q61124 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Cln3Q61124 Gm9377-201ENSMUST00000207227 623 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms