Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm31849-201ENSMUST00000220306 375 ntBASIC2.19□□□□□ -2.06
Col2a1P28481 Gm30155-201ENSMUST00000223458 339 ntBASIC2.19□□□□□ -2.06
Col2a1P28481 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC2.19□□□□□ -2.06
Col2a1P28481 Olfr1193-201ENSMUST00000081697 957 ntBASIC2.19□□□□□ -2.06
Col2a1P28481 Gm25586-201ENSMUST00000082499 112 ntBASIC2.19□□□□□ -2.06
Col2a1P28481 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC2.19□□□□□ -2.06
Col2a1P28481 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
Col2a1P28481 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC2.18□□□□□ -2.06
Col2a1P28481 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
Col2a1P28481 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC2.18□□□□□ -2.06
Col2a1P28481 Gm25090-201ENSMUST00000104000 132 ntBASIC2.18□□□□□ -2.06
Col2a1P28481 Gm13614-201ENSMUST00000117306 503 ntBASIC2.18□□□□□ -2.06
Col2a1P28481 Gm11577-201ENSMUST00000118030 737 ntBASIC2.18□□□□□ -2.06
Col2a1P28481 Gm13454-201ENSMUST00000118166 483 ntBASIC2.18□□□□□ -2.06
Col2a1P28481 Gm14293-201ENSMUST00000118528 577 ntBASIC2.18□□□□□ -2.06
Col2a1P28481 Gm13239-201ENSMUST00000119920 637 ntBASIC2.18□□□□□ -2.06
Col2a1P28481 Gm7916-201ENSMUST00000120325 456 ntBASIC2.18□□□□□ -2.06
Col2a1P28481 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC2.18□□□□□ -2.06
Col2a1P28481 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
Col2a1P28481 Gm26348-201ENSMUST00000157528 240 ntBASIC2.18□□□□□ -2.06
Col2a1P28481 Mir3964-201ENSMUST00000174898 74 ntBASIC2.18□□□□□ -2.06
Col2a1P28481 Gm25156-201ENSMUST00000179809 79 ntBASIC2.18□□□□□ -2.06
Col2a1P28481 Gm23186-201ENSMUST00000180078 107 ntBASIC2.18□□□□□ -2.06
Col2a1P28481 Gm26864-201ENSMUST00000181346 156 ntBASIC2.18□□□□□ -2.06
Col2a1P28481 Gm26914-201ENSMUST00000182262 223 ntBASIC2.18□□□□□ -2.06
Col2a1P28481 Gm26960-201ENSMUST00000182263 412 ntBASIC2.18□□□□□ -2.06
Col2a1P28481 Mir6541-201ENSMUST00000183649 110 ntBASIC2.18□□□□□ -2.06
Col2a1P28481 Gm10193-201ENSMUST00000188288 231 ntBASIC2.18□□□□□ -2.06
Col2a1P28481 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC2.18□□□□□ -2.06
Col2a1P28481 Gm44349-201ENSMUST00000197048 123 ntBASIC2.18□□□□□ -2.06
Col2a1P28481 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC2.18□□□□□ -2.06
Col2a1P28481 Gm45439-201ENSMUST00000211723 359 ntBASIC2.18□□□□□ -2.06
Col2a1P28481 Olfr929-ps1-201ENSMUST00000216338 585 ntBASIC2.18□□□□□ -2.06
Col2a1P28481 AC154747.1-201ENSMUST00000225265 239 ntBASIC2.18□□□□□ -2.06
Col2a1P28481 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
Col2a1P28481 Gm25792-201ENSMUST00000083289 100 ntBASIC2.18□□□□□ -2.06
Col2a1P28481 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Col2a1P28481 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Col2a1P28481 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC2.17□□□□□ -2.06
Col2a1P28481 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Col2a1P28481 Mir19b-1-201ENSMUST00000102301 87 ntBASIC2.17□□□□□ -2.06
Col2a1P28481 Gm13482-201ENSMUST00000119842 254 ntBASIC2.17□□□□□ -2.06
Col2a1P28481 Gm14411-201ENSMUST00000121798 914 ntBASIC2.17□□□□□ -2.06
Col2a1P28481 Gm6568-201ENSMUST00000122274 697 ntBASIC2.17□□□□□ -2.06
Col2a1P28481 n-R5s192-201ENSMUST00000122577 119 ntBASIC2.17□□□□□ -2.06
Col2a1P28481 Mup-ps12-201ENSMUST00000126217 549 ntBASIC2.17□□□□□ -2.06
Col2a1P28481 Gm23167-201ENSMUST00000157155 103 ntBASIC2.17□□□□□ -2.06
Col2a1P28481 Gm22554-201ENSMUST00000157798 147 ntBASIC2.17□□□□□ -2.06
Col2a1P28481 Gm24438-201ENSMUST00000157893 115 ntBASIC2.17□□□□□ -2.06
Col2a1P28481 Gm24100-201ENSMUST00000178592 79 ntBASIC2.17□□□□□ -2.06
Col2a1P28481 Gm24137-201ENSMUST00000180055 79 ntBASIC2.17□□□□□ -2.06
Col2a1P28481 Gm22391-201ENSMUST00000180356 79 ntBASIC2.17□□□□□ -2.06
Col2a1P28481 Mir6341-201ENSMUST00000183490 121 ntBASIC2.17□□□□□ -2.06
Col2a1P28481 Gm29167-201ENSMUST00000190024 377 ntBASIC2.17□□□□□ -2.06
Col2a1P28481 Gm37692-201ENSMUST00000192633 232 ntBASIC2.17□□□□□ -2.06
Col2a1P28481 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC2.17□□□□□ -2.06
Col2a1P28481 Gm44923-201ENSMUST00000206673 85 ntBASIC2.17□□□□□ -2.06
Col2a1P28481 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC2.17□□□□□ -2.06
Col2a1P28481 Gm46194-201ENSMUST00000218136 320 ntBASIC2.17□□□□□ -2.06
Col2a1P28481 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC2.17□□□□□ -2.06
Col2a1P28481 Gm2446-201ENSMUST00000220144 772 ntBASIC2.17□□□□□ -2.06
Col2a1P28481 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Col2a1P28481 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Col2a1P28481 Gm11284-201ENSMUST00000121910 1887 ntBASIC2.17□□□□□ -2.06
Col2a1P28481 Olfr196-202ENSMUST00000205471 1711 ntAPPRIS P1 TSL 3 BASIC2.17□□□□□ -2.06
Col2a1P28481 Vmn1r228-201ENSMUST00000072410 1443 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Col2a1P28481 Mir667-201ENSMUST00000102441 92 ntBASIC2.16□□□□□ -2.06
Col2a1P28481 Gm25728-201ENSMUST00000104525 159 ntBASIC2.16□□□□□ -2.06
Col2a1P28481 Gm25563-201ENSMUST00000104603 74 ntBASIC2.16□□□□□ -2.06
Col2a1P28481 Gm6923-201ENSMUST00000118343 406 ntBASIC2.16□□□□□ -2.06
Col2a1P28481 Gm16411-201ENSMUST00000122164 1100 ntBASIC2.16□□□□□ -2.06
Col2a1P28481 Gm22597-201ENSMUST00000157602 80 ntBASIC2.16□□□□□ -2.06
Col2a1P28481 Gm25163-201ENSMUST00000158905 104 ntBASIC2.16□□□□□ -2.06
Col2a1P28481 Gm23619-201ENSMUST00000178411 94 ntBASIC2.16□□□□□ -2.06
Col2a1P28481 Gm25474-201ENSMUST00000179052 94 ntBASIC2.16□□□□□ -2.06
Col2a1P28481 Gm22047-201ENSMUST00000179176 94 ntBASIC2.16□□□□□ -2.06
Col2a1P28481 Gm26968-201ENSMUST00000182894 481 ntBASIC2.16□□□□□ -2.06
Col2a1P28481 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC2.16□□□□□ -2.06
Col2a1P28481 Gm28414-201ENSMUST00000190111 294 ntBASIC2.16□□□□□ -2.06
Col2a1P28481 Gm18291-201ENSMUST00000190791 301 ntBASIC2.16□□□□□ -2.06
Col2a1P28481 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC2.16□□□□□ -2.06
Col2a1P28481 Gm43541-201ENSMUST00000197208 581 ntBASIC2.16□□□□□ -2.06
Col2a1P28481 Gm43513-201ENSMUST00000199779 1076 ntBASIC2.16□□□□□ -2.06
Col2a1P28481 Gm45023-201ENSMUST00000207951 379 ntBASIC2.16□□□□□ -2.06
Col2a1P28481 Gm45445-201ENSMUST00000209586 232 ntBASIC2.16□□□□□ -2.06
Col2a1P28481 Gm45316-201ENSMUST00000210128 162 ntBASIC2.16□□□□□ -2.06
Col2a1P28481 Gm18703-201ENSMUST00000215318 333 ntBASIC2.16□□□□□ -2.06
Col2a1P28481 Gm46312-201ENSMUST00000220961 420 ntBASIC2.16□□□□□ -2.06
Col2a1P28481 AC153662.1-201ENSMUST00000222220 270 ntBASIC2.16□□□□□ -2.06
Col2a1P28481 AC159621.1-201ENSMUST00000223249 163 ntBASIC2.16□□□□□ -2.06
Col2a1P28481 AC173481.1-201ENSMUST00000223351 270 ntBASIC2.16□□□□□ -2.06
Col2a1P28481 AC147633.1-201ENSMUST00000225134 259 ntBASIC2.16□□□□□ -2.06
Col2a1P28481 CT030238.4-201ENSMUST00000228579 801 ntBASIC2.16□□□□□ -2.06
Col2a1P28481 Gm23733-201ENSMUST00000083750 106 ntBASIC2.16□□□□□ -2.06
Col2a1P28481 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Col2a1P28481 AC125532.1-201ENSMUST00000216210 2334 ntBASIC2.16□□□□□ -2.06
Col2a1P28481 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC2.15□□□□□ -2.06
Col2a1P28481 Gm4855-201ENSMUST00000192270 1967 ntBASIC2.15□□□□□ -2.06
Col2a1P28481 Gm43047-201ENSMUST00000200089 3460 ntBASIC2.15□□□□□ -2.06
Col2a1P28481 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 85.6 ms