Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm28637-201ENSMUST00000179424 345 ntBASIC1.85□□□□□ -2.11
Cdx1P18111 Mir6335-201ENSMUST00000184081 98 ntBASIC1.85□□□□□ -2.11
Cdx1P18111 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Cdx1P18111 Gm27959-201ENSMUST00000185172 111 ntBASIC1.85□□□□□ -2.11
Cdx1P18111 Gm28058-201ENSMUST00000186421 264 ntBASIC1.85□□□□□ -2.11
Cdx1P18111 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC1.85□□□□□ -2.11
Cdx1P18111 Gm37533-201ENSMUST00000193848 545 ntBASIC1.85□□□□□ -2.11
Cdx1P18111 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC1.85□□□□□ -2.11
Cdx1P18111 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC1.85□□□□□ -2.11
Cdx1P18111 Gm44254-201ENSMUST00000204184 322 ntBASIC1.85□□□□□ -2.11
Cdx1P18111 Gm44825-201ENSMUST00000207557 150 ntBASIC1.85□□□□□ -2.11
Cdx1P18111 Gm44598-201ENSMUST00000207566 150 ntBASIC1.85□□□□□ -2.11
Cdx1P18111 Gm44954-201ENSMUST00000208513 227 ntBASIC1.85□□□□□ -2.11
Cdx1P18111 Gm45879-201ENSMUST00000212521 392 ntBASIC1.85□□□□□ -2.11
Cdx1P18111 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC1.85□□□□□ -2.11
Cdx1P18111 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC1.85□□□□□ -2.11
Cdx1P18111 3830403N18Rik-201ENSMUST00000033458 1022 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Cdx1P18111 Gm24151-201ENSMUST00000082758 141 ntBASIC1.85□□□□□ -2.11
Cdx1P18111 Gm10717-203ENSMUST00000099051 639 ntAPPRIS ALT2 TSL 5 BASIC1.85□□□□□ -2.11
Cdx1P18111 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
Cdx1P18111 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC1.84□□□□□ -2.11
Cdx1P18111 Gm24670-201ENSMUST00000104154 132 ntBASIC1.84□□□□□ -2.11
Cdx1P18111 Gm22091-201ENSMUST00000116908 127 ntBASIC1.84□□□□□ -2.11
Cdx1P18111 Gm12507-201ENSMUST00000119155 415 ntBASIC1.84□□□□□ -2.11
Cdx1P18111 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC1.84□□□□□ -2.11
Cdx1P18111 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC1.84□□□□□ -2.11
Cdx1P18111 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
Cdx1P18111 Gm17154-201ENSMUST00000165748 431 ntBASIC1.84□□□□□ -2.11
Cdx1P18111 Gm2930-201ENSMUST00000170403 474 ntBASIC1.84□□□□□ -2.11
Cdx1P18111 Gm8114-201ENSMUST00000172225 484 ntBASIC1.84□□□□□ -2.11
Cdx1P18111 Olfr756-ps1-201ENSMUST00000173450 928 ntBASIC1.84□□□□□ -2.11
Cdx1P18111 Gm25156-201ENSMUST00000179809 79 ntBASIC1.84□□□□□ -2.11
Cdx1P18111 Gm27511-201ENSMUST00000183502 127 ntBASIC1.84□□□□□ -2.11
Cdx1P18111 Mir7009-201ENSMUST00000184519 64 ntBASIC1.84□□□□□ -2.11
Cdx1P18111 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC1.84□□□□□ -2.11
Cdx1P18111 Gm44609-201ENSMUST00000207157 460 ntBASIC1.84□□□□□ -2.11
Cdx1P18111 Gm44844-201ENSMUST00000207242 336 ntBASIC1.84□□□□□ -2.11
Cdx1P18111 Olfr1088-ps1-201ENSMUST00000213686 863 ntBASIC1.84□□□□□ -2.11
Cdx1P18111 AC160030.1-201ENSMUST00000218916 506 ntTSL 2 BASIC1.84□□□□□ -2.11
Cdx1P18111 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC1.84□□□□□ -2.11
Cdx1P18111 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC1.84□□□□□ -2.11
Cdx1P18111 AC138401.1-201ENSMUST00000221533 116 ntBASIC1.84□□□□□ -2.11
Cdx1P18111 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC1.84□□□□□ -2.11
Cdx1P18111 Snord14d-201ENSMUST00000083424 86 ntBASIC1.84□□□□□ -2.11
Cdx1P18111 Gm42635-201ENSMUST00000200266 2571 ntBASIC1.83□□□□□ -2.12
Cdx1P18111 Gm14852-201ENSMUST00000120065 647 ntBASIC1.83□□□□□ -2.12
Cdx1P18111 Gm15692-201ENSMUST00000152173 352 ntBASIC1.83□□□□□ -2.12
Cdx1P18111 U6.1-201ENSMUST00000157443 101 ntBASIC1.83□□□□□ -2.12
Cdx1P18111 Gm18358-201ENSMUST00000173179 1277 ntBASIC1.83□□□□□ -2.12
Cdx1P18111 Gm5900-201ENSMUST00000179862 375 ntBASIC1.83□□□□□ -2.12
Cdx1P18111 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC1.83□□□□□ -2.12
Cdx1P18111 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC1.83□□□□□ -2.12
Cdx1P18111 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC1.83□□□□□ -2.12
Cdx1P18111 Gm28706-201ENSMUST00000186830 355 ntTSL 2 BASIC1.83□□□□□ -2.12
Cdx1P18111 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC1.83□□□□□ -2.12
Cdx1P18111 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Cdx1P18111 Gm38154-201ENSMUST00000195444 340 ntBASIC1.83□□□□□ -2.12
Cdx1P18111 Gm25820-202ENSMUST00000197479 128 ntBASIC1.83□□□□□ -2.12
Cdx1P18111 Gm42807-201ENSMUST00000200141 329 ntBASIC1.83□□□□□ -2.12
Cdx1P18111 Gm2676-201ENSMUST00000207279 606 ntBASIC1.83□□□□□ -2.12
Cdx1P18111 Gm17911-201ENSMUST00000210806 877 ntBASIC1.83□□□□□ -2.12
Cdx1P18111 Gm45730-201ENSMUST00000212560 395 ntBASIC1.83□□□□□ -2.12
Cdx1P18111 AC153522.1-201ENSMUST00000220047 1090 ntBASIC1.83□□□□□ -2.12
Cdx1P18111 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC1.83□□□□□ -2.12
Cdx1P18111 AC154252.1-201ENSMUST00000226041 473 ntBASIC1.83□□□□□ -2.12
Cdx1P18111 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Cdx1P18111 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC1.83□□□□□ -2.12
Cdx1P18111 Mir465-201ENSMUST00000093563 74 ntBASIC1.83□□□□□ -2.12
Cdx1P18111 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC1.82□□□□□ -2.12
Cdx1P18111 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Cdx1P18111 Gm23744-201ENSMUST00000104231 149 ntBASIC1.82□□□□□ -2.12
Cdx1P18111 Mdga2-203ENSMUST00000113942 423 ntBASIC1.82□□□□□ -2.12
Cdx1P18111 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC1.82□□□□□ -2.12
Cdx1P18111 Gm23956-201ENSMUST00000157211 119 ntBASIC1.82□□□□□ -2.12
Cdx1P18111 Gm24770-201ENSMUST00000158505 92 ntBASIC1.82□□□□□ -2.12
Cdx1P18111 Gm24837-201ENSMUST00000158683 81 ntBASIC1.82□□□□□ -2.12
Cdx1P18111 Gm25488-201ENSMUST00000158728 118 ntBASIC1.82□□□□□ -2.12
Cdx1P18111 Gm2343-201ENSMUST00000161177 1042 ntBASIC1.82□□□□□ -2.12
Cdx1P18111 Ear-ps4-201ENSMUST00000166834 450 ntBASIC1.82□□□□□ -2.12
Cdx1P18111 Trbv24-201ENSMUST00000194614 347 ntBASIC1.82□□□□□ -2.12
Cdx1P18111 Gm38167-201ENSMUST00000195704 1178 ntBASIC1.82□□□□□ -2.12
Cdx1P18111 Gm38268-201ENSMUST00000195813 193 ntBASIC1.82□□□□□ -2.12
Cdx1P18111 Gm44392-201ENSMUST00000196758 115 ntBASIC1.82□□□□□ -2.12
Cdx1P18111 Igkv13-73-1-201ENSMUST00000196767 200 ntBASIC1.82□□□□□ -2.12
Cdx1P18111 Gm45490-201ENSMUST00000210084 742 ntTSL 3 BASIC1.82□□□□□ -2.12
Cdx1P18111 AC124104.1-201ENSMUST00000226279 417 ntBASIC1.82□□□□□ -2.12
Cdx1P18111 Gm23246-201ENSMUST00000083371 67 ntBASIC1.82□□□□□ -2.12
Cdx1P18111 Gm19194-201ENSMUST00000192015 3774 ntBASIC1.82□□□□□ -2.12
Cdx1P18111 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
Cdx1P18111 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC1.81□□□□□ -2.12
Cdx1P18111 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC1.81□□□□□ -2.12
Cdx1P18111 Gm26015-201ENSMUST00000104402 125 ntBASIC1.81□□□□□ -2.12
Cdx1P18111 Mir669d-201ENSMUST00000104644 121 ntBASIC1.81□□□□□ -2.12
Cdx1P18111 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Cdx1P18111 Gm23118-201ENSMUST00000122657 187 ntBASIC1.81□□□□□ -2.12
Cdx1P18111 Gm25113-201ENSMUST00000157185 143 ntBASIC1.81□□□□□ -2.12
Cdx1P18111 Gm27396-201ENSMUST00000157708 58 ntBASIC1.81□□□□□ -2.12
Cdx1P18111 Gm25866-201ENSMUST00000158245 112 ntBASIC1.81□□□□□ -2.12
Cdx1P18111 Gm24210-201ENSMUST00000158263 133 ntBASIC1.81□□□□□ -2.12
Cdx1P18111 Snord116l14-201ENSMUST00000179875 94 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms