Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Olfr361-203ENSMUST00000216663 2617 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Col3a1P08121 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Col3a1P08121 Gm25097-201ENSMUST00000104042 145 ntBASIC3.1□□□□□ -1.91
Col3a1P08121 Gm24338-201ENSMUST00000104205 127 ntBASIC3.1□□□□□ -1.91
Col3a1P08121 Gm14125-201ENSMUST00000113442 680 ntBASIC3.1□□□□□ -1.91
Col3a1P08121 Gm11577-201ENSMUST00000118030 737 ntBASIC3.1□□□□□ -1.91
Col3a1P08121 Gm12235-201ENSMUST00000118596 170 ntBASIC3.1□□□□□ -1.91
Col3a1P08121 Gm14843-201ENSMUST00000119596 212 ntBASIC3.1□□□□□ -1.91
Col3a1P08121 Gm6565-201ENSMUST00000121217 438 ntBASIC3.1□□□□□ -1.91
Col3a1P08121 Gm6486-201ENSMUST00000166202 434 ntBASIC3.1□□□□□ -1.91
Col3a1P08121 Defa27-202ENSMUST00000168340 371 ntTSL 5 BASIC3.1□□□□□ -1.91
Col3a1P08121 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Col3a1P08121 Gm28098-201ENSMUST00000191361 699 ntBASIC3.1□□□□□ -1.91
Col3a1P08121 Gm42828-201ENSMUST00000199669 469 ntBASIC3.1□□□□□ -1.91
Col3a1P08121 Gm43914-201ENSMUST00000203592 594 ntBASIC3.1□□□□□ -1.91
Col3a1P08121 Gm44858-201ENSMUST00000207360 154 ntBASIC3.1□□□□□ -1.91
Col3a1P08121 AC166358.7-201ENSMUST00000221132 108 ntBASIC3.1□□□□□ -1.91
Col3a1P08121 AC125543.5-201ENSMUST00000222799 108 ntBASIC3.1□□□□□ -1.91
Col3a1P08121 CT009713.4-201ENSMUST00000224246 272 ntBASIC3.1□□□□□ -1.91
Col3a1P08121 Olfr483-202ENSMUST00000215159 2691 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
Col3a1P08121 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
Col3a1P08121 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Col3a1P08121 Gm14390-201ENSMUST00000117505 1695 ntBASIC3.1□□□□□ -1.91
Col3a1P08121 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
Col3a1P08121 Gm22752-201ENSMUST00000102083 109 ntBASIC3.09□□□□□ -1.91
Col3a1P08121 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC3.09□□□□□ -1.91
Col3a1P08121 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC3.09□□□□□ -1.91
Col3a1P08121 Gm11936-201ENSMUST00000118323 160 ntBASIC3.09□□□□□ -1.91
Col3a1P08121 Gm15106-201ENSMUST00000119691 821 ntBASIC3.09□□□□□ -1.91
Col3a1P08121 Gm23889-201ENSMUST00000122689 104 ntBASIC3.09□□□□□ -1.91
Col3a1P08121 Gm23960-201ENSMUST00000157206 131 ntBASIC3.09□□□□□ -1.91
Col3a1P08121 Gm8580-201ENSMUST00000160295 464 ntBASIC3.09□□□□□ -1.91
Col3a1P08121 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Col3a1P08121 Gm23144-201ENSMUST00000180226 107 ntBASIC3.09□□□□□ -1.91
Col3a1P08121 Gm27220-201ENSMUST00000183453 262 ntBASIC3.09□□□□□ -1.91
Col3a1P08121 Gm27385-201ENSMUST00000184747 104 ntBASIC3.09□□□□□ -1.91
Col3a1P08121 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC3.09□□□□□ -1.91
Col3a1P08121 Gm19257-201ENSMUST00000186121 183 ntBASIC3.09□□□□□ -1.91
Col3a1P08121 Gm28506-201ENSMUST00000189937 150 ntBASIC3.09□□□□□ -1.91
Col3a1P08121 Gm2719-201ENSMUST00000191929 444 ntBASIC3.09□□□□□ -1.91
Col3a1P08121 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Col3a1P08121 Gm18488-201ENSMUST00000215082 364 ntBASIC3.09□□□□□ -1.91
Col3a1P08121 Gm35262-201ENSMUST00000215133 267 ntBASIC3.09□□□□□ -1.91
Col3a1P08121 AC153506.2-201ENSMUST00000218051 257 ntBASIC3.09□□□□□ -1.91
Col3a1P08121 CT485612.2-201ENSMUST00000223014 151 ntBASIC3.09□□□□□ -1.91
Col3a1P08121 AC109172.1-201ENSMUST00000227503 187 ntBASIC3.09□□□□□ -1.91
Col3a1P08121 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Col3a1P08121 Olfr178-203ENSMUST00000215032 2103 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Col3a1P08121 Olfr109-204ENSMUST00000217602 5437 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Col3a1P08121 Gm43256-201ENSMUST00000199995 3091 ntBASIC3.09□□□□□ -1.91
Col3a1P08121 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.92
Col3a1P08121 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.92
Col3a1P08121 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC3.09□□□□□ -1.92
Col3a1P08121 Gm16171-201ENSMUST00000118004 324 ntBASIC3.09□□□□□ -1.92
Col3a1P08121 Gm12954-201ENSMUST00000118610 611 ntBASIC3.09□□□□□ -1.92
Col3a1P08121 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC3.09□□□□□ -1.92
Col3a1P08121 Gm22791-201ENSMUST00000157232 145 ntBASIC3.09□□□□□ -1.92
Col3a1P08121 Gm25718-201ENSMUST00000158632 118 ntBASIC3.09□□□□□ -1.92
Col3a1P08121 Gm3623-201ENSMUST00000173643 2747 ntBASIC3.09□□□□□ -1.92
Col3a1P08121 Snord53-201ENSMUST00000175146 78 ntBASIC3.09□□□□□ -1.92
Col3a1P08121 Gm22716-201ENSMUST00000177596 107 ntBASIC3.09□□□□□ -1.92
Col3a1P08121 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC3.09□□□□□ -1.92
Col3a1P08121 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC3.09□□□□□ -1.92
Col3a1P08121 Crs-ps-201ENSMUST00000203723 760 ntBASIC3.09□□□□□ -1.92
Col3a1P08121 Gm45150-201ENSMUST00000206051 467 ntBASIC3.09□□□□□ -1.92
Col3a1P08121 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC3.09□□□□□ -1.92
Col3a1P08121 AC140285.1-201ENSMUST00000220472 452 ntTSL 3 BASIC3.09□□□□□ -1.92
Col3a1P08121 CT025577.1-201ENSMUST00000220862 2846 ntBASIC3.09□□□□□ -1.92
Col3a1P08121 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC3.09□□□□□ -1.92
Col3a1P08121 AC125350.4-201ENSMUST00000225895 273 ntBASIC3.09□□□□□ -1.92
Col3a1P08121 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC3.09□□□□□ -1.92
Col3a1P08121 Snord68-201ENSMUST00000082516 86 ntBASIC3.09□□□□□ -1.92
Col3a1P08121 Gm25853-201ENSMUST00000082793 132 ntBASIC3.09□□□□□ -1.92
Col3a1P08121 Olfr203-201ENSMUST00000089305 924 ntBASIC3.09□□□□□ -1.92
Col3a1P08121 Olfr1137-202ENSMUST00000214209 3073 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Col3a1P08121 Gm11285-201ENSMUST00000118443 322 ntBASIC3.08□□□□□ -1.92
Col3a1P08121 Gm2005-201ENSMUST00000120759 542 ntBASIC3.08□□□□□ -1.92
Col3a1P08121 Gm12443-201ENSMUST00000122308 323 ntBASIC3.08□□□□□ -1.92
Col3a1P08121 Gm14129-201ENSMUST00000122436 291 ntBASIC3.08□□□□□ -1.92
Col3a1P08121 Gm25339-201ENSMUST00000157458 232 ntBASIC3.08□□□□□ -1.92
Col3a1P08121 Gm14819-202ENSMUST00000169396 639 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Col3a1P08121 Gm10487-201ENSMUST00000177566 639 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Col3a1P08121 Gm14632-202ENSMUST00000177917 639 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Col3a1P08121 Gm10058-202ENSMUST00000178152 639 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Col3a1P08121 Gm10096-201ENSMUST00000178672 639 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Col3a1P08121 Gm10230-202ENSMUST00000178745 639 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Col3a1P08121 Gm2092-201ENSMUST00000178887 639 ntBASIC3.08□□□□□ -1.92
Col3a1P08121 Gm10147-202ENSMUST00000178966 639 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Col3a1P08121 Gm23191-201ENSMUST00000179147 107 ntBASIC3.08□□□□□ -1.92
Col3a1P08121 Gm2759-201ENSMUST00000179938 639 ntBASIC3.08□□□□□ -1.92
Col3a1P08121 Gm27330-201ENSMUST00000184689 132 ntBASIC3.08□□□□□ -1.92
Col3a1P08121 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC3.08□□□□□ -1.92
Col3a1P08121 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC3.08□□□□□ -1.92
Col3a1P08121 Mir6925-201ENSMUST00000197857 70 ntBASIC3.08□□□□□ -1.92
Col3a1P08121 Gm44092-201ENSMUST00000204470 258 ntBASIC3.08□□□□□ -1.92
Col3a1P08121 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC3.08□□□□□ -1.92
Col3a1P08121 Olfr662-ps1-201ENSMUST00000210704 396 ntBASIC3.08□□□□□ -1.92
Col3a1P08121 Gm2446-201ENSMUST00000220144 772 ntBASIC3.08□□□□□ -1.92
Col3a1P08121 AC122924.2-201ENSMUST00000220799 298 ntBASIC3.08□□□□□ -1.92
Col3a1P08121 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC3.08□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 87.9 ms