Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC3.24□□□□□ -1.89
Nkx2-4Q9EQM3 Gm18921-201ENSMUST00000221798 366 ntBASIC3.24□□□□□ -1.89
Nkx2-4Q9EQM3 Gm22970-201ENSMUST00000083304 186 ntBASIC3.24□□□□□ -1.89
Nkx2-4Q9EQM3 Gabra2-203ENSMUST00000197284 5852 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Nkx2-4Q9EQM3 Gm37642-201ENSMUST00000193166 1735 ntBASIC3.24□□□□□ -1.89
Nkx2-4Q9EQM3 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Nkx2-4Q9EQM3 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Nkx2-4Q9EQM3 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Nkx2-4Q9EQM3 Gm24096-201ENSMUST00000103905 110 ntBASIC3.23□□□□□ -1.89
Nkx2-4Q9EQM3 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC3.23□□□□□ -1.89
Nkx2-4Q9EQM3 n-R5s216-201ENSMUST00000122755 112 ntBASIC3.23□□□□□ -1.89
Nkx2-4Q9EQM3 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC3.23□□□□□ -1.89
Nkx2-4Q9EQM3 Gm22611-201ENSMUST00000158288 150 ntBASIC3.23□□□□□ -1.89
Nkx2-4Q9EQM3 Gm22500-201ENSMUST00000158982 99 ntBASIC3.23□□□□□ -1.89
Nkx2-4Q9EQM3 Gm4468-201ENSMUST00000170206 294 ntBASIC3.23□□□□□ -1.89
Nkx2-4Q9EQM3 Gm20484-201ENSMUST00000173738 231 ntTSL 2 BASIC3.23□□□□□ -1.89
Nkx2-4Q9EQM3 Ang-ps3-201ENSMUST00000177964 433 ntBASIC3.23□□□□□ -1.89
Nkx2-4Q9EQM3 Gm24862-201ENSMUST00000179103 79 ntBASIC3.23□□□□□ -1.89
Nkx2-4Q9EQM3 Gm23310-201ENSMUST00000179105 79 ntBASIC3.23□□□□□ -1.89
Nkx2-4Q9EQM3 Gm25461-201ENSMUST00000179293 79 ntBASIC3.23□□□□□ -1.89
Nkx2-4Q9EQM3 Gm7258-201ENSMUST00000179317 300 ntBASIC3.23□□□□□ -1.89
Nkx2-4Q9EQM3 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC3.23□□□□□ -1.89
Nkx2-4Q9EQM3 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Nkx2-4Q9EQM3 Gm44825-201ENSMUST00000207557 150 ntBASIC3.23□□□□□ -1.89
Nkx2-4Q9EQM3 Gm44598-201ENSMUST00000207566 150 ntBASIC3.23□□□□□ -1.89
Nkx2-4Q9EQM3 Olfr807-202ENSMUST00000213379 1866 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Nkx2-4Q9EQM3 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC3.23□□□□□ -1.89
Nkx2-4Q9EQM3 Gm25929-201ENSMUST00000082784 107 ntBASIC3.23□□□□□ -1.89
Nkx2-4Q9EQM3 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Nkx2-4Q9EQM3 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Nkx2-4Q9EQM3 Gm43875-201ENSMUST00000203319 2475 ntBASIC3.22□□□□□ -1.89
Nkx2-4Q9EQM3 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
Nkx2-4Q9EQM3 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Nkx2-4Q9EQM3 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Nkx2-4Q9EQM3 Gm13806-201ENSMUST00000117822 325 ntBASIC3.22□□□□□ -1.89
Nkx2-4Q9EQM3 Gm9059-201ENSMUST00000118319 183 ntBASIC3.22□□□□□ -1.89
Nkx2-4Q9EQM3 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC3.22□□□□□ -1.89
Nkx2-4Q9EQM3 Gm14287-201ENSMUST00000121060 117 ntBASIC3.22□□□□□ -1.89
Nkx2-4Q9EQM3 Gm15244-201ENSMUST00000121122 130 ntBASIC3.22□□□□□ -1.89
Nkx2-4Q9EQM3 Gm25808-201ENSMUST00000122784 284 ntBASIC3.22□□□□□ -1.89
Nkx2-4Q9EQM3 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC3.22□□□□□ -1.89
Nkx2-4Q9EQM3 Gm24504-201ENSMUST00000157679 100 ntBASIC3.22□□□□□ -1.89
Nkx2-4Q9EQM3 Gm22891-201ENSMUST00000158641 164 ntBASIC3.22□□□□□ -1.89
Nkx2-4Q9EQM3 Gm22668-201ENSMUST00000158716 260 ntBASIC3.22□□□□□ -1.89
Nkx2-4Q9EQM3 Gm24225-201ENSMUST00000158825 98 ntBASIC3.22□□□□□ -1.89
Nkx2-4Q9EQM3 Gm10075-201ENSMUST00000162030 545 ntBASIC3.22□□□□□ -1.89
Nkx2-4Q9EQM3 Gm25671-201ENSMUST00000178612 105 ntBASIC3.22□□□□□ -1.89
Nkx2-4Q9EQM3 Gm23307-201ENSMUST00000179167 105 ntBASIC3.22□□□□□ -1.89
Nkx2-4Q9EQM3 Gm21978-201ENSMUST00000179696 377 ntBASIC3.22□□□□□ -1.89
Nkx2-4Q9EQM3 Gm25286-201ENSMUST00000179790 105 ntBASIC3.22□□□□□ -1.89
Nkx2-4Q9EQM3 Gm28755-201ENSMUST00000185773 199 ntBASIC3.22□□□□□ -1.89
Nkx2-4Q9EQM3 Gm29602-201ENSMUST00000186887 442 ntBASIC3.22□□□□□ -1.89
Nkx2-4Q9EQM3 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC3.22□□□□□ -1.89
Nkx2-4Q9EQM3 Gm38332-201ENSMUST00000194189 147 ntBASIC3.22□□□□□ -1.89
Nkx2-4Q9EQM3 Ighv1-32-201ENSMUST00000195149 351 ntBASIC3.22□□□□□ -1.89
Nkx2-4Q9EQM3 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC3.22□□□□□ -1.89
Nkx2-4Q9EQM3 Gm6059-201ENSMUST00000196903 340 ntBASIC3.22□□□□□ -1.89
Nkx2-4Q9EQM3 Gm18982-201ENSMUST00000198118 529 ntBASIC3.22□□□□□ -1.89
Nkx2-4Q9EQM3 Gm43812-201ENSMUST00000200976 581 ntTSL 5 BASIC3.22□□□□□ -1.89
Nkx2-4Q9EQM3 AC174457.1-201ENSMUST00000215932 226 ntBASIC3.22□□□□□ -1.89
Nkx2-4Q9EQM3 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Nkx2-4Q9EQM3 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Nkx2-4Q9EQM3 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Nkx2-4Q9EQM3 Oog1-203ENSMUST00000222332 1464 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
Nkx2-4Q9EQM3 Olfr986-203ENSMUST00000216720 3381 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.89
Nkx2-4Q9EQM3 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.89
Nkx2-4Q9EQM3 Gm14416-201ENSMUST00000118630 2308 ntBASIC3.21□□□□□ -1.89
Nkx2-4Q9EQM3 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Nkx2-4Q9EQM3 Gm15975-201ENSMUST00000122385 1402 ntBASIC3.21□□□□□ -1.9
Nkx2-4Q9EQM3 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
Nkx2-4Q9EQM3 Gm14013-201ENSMUST00000119006 270 ntBASIC3.21□□□□□ -1.9
Nkx2-4Q9EQM3 Gm15223-201ENSMUST00000120989 826 ntBASIC3.21□□□□□ -1.9
Nkx2-4Q9EQM3 Gm22957-201ENSMUST00000122511 123 ntBASIC3.21□□□□□ -1.9
Nkx2-4Q9EQM3 Gm22225-201ENSMUST00000157358 278 ntBASIC3.21□□□□□ -1.9
Nkx2-4Q9EQM3 Gm16567-201ENSMUST00000160967 576 ntTSL 5 BASIC3.21□□□□□ -1.9
Nkx2-4Q9EQM3 Gm15914-201ENSMUST00000161922 309 ntBASIC3.21□□□□□ -1.9
Nkx2-4Q9EQM3 Gm29429-201ENSMUST00000187071 121 ntBASIC3.21□□□□□ -1.9
Nkx2-4Q9EQM3 Gm44703-201ENSMUST00000205724 248 ntBASIC3.21□□□□□ -1.9
Nkx2-4Q9EQM3 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC3.21□□□□□ -1.9
Nkx2-4Q9EQM3 AC166341.3-201ENSMUST00000221861 114 ntBASIC3.21□□□□□ -1.9
Nkx2-4Q9EQM3 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC3.21□□□□□ -1.9
Nkx2-4Q9EQM3 Gm10025-201ENSMUST00000079568 372 ntBASIC3.21□□□□□ -1.9
Nkx2-4Q9EQM3 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC3.21□□□□□ -1.9
Nkx2-4Q9EQM3 Gm10242-201ENSMUST00000090064 330 ntBASIC3.21□□□□□ -1.9
Nkx2-4Q9EQM3 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Nkx2-4Q9EQM3 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Nkx2-4Q9EQM3 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC3.21□□□□□ -1.9
Nkx2-4Q9EQM3 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Nkx2-4Q9EQM3 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
Nkx2-4Q9EQM3 Gm38706-201ENSMUST00000182397 2617 ntBASIC3.21□□□□□ -1.9
Nkx2-4Q9EQM3 AC153887.2-201ENSMUST00000219160 3838 ntBASIC3.2□□□□□ -1.9
Nkx2-4Q9EQM3 Gm13122-201ENSMUST00000118380 453 ntBASIC3.2□□□□□ -1.9
Nkx2-4Q9EQM3 Gm12803-201ENSMUST00000118907 821 ntBASIC3.2□□□□□ -1.9
Nkx2-4Q9EQM3 Gm13153-201ENSMUST00000120969 637 ntBASIC3.2□□□□□ -1.9
Nkx2-4Q9EQM3 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC3.2□□□□□ -1.9
Nkx2-4Q9EQM3 Gm14821-201ENSMUST00000121975 435 ntBASIC3.2□□□□□ -1.9
Nkx2-4Q9EQM3 Gm15700-201ENSMUST00000139791 821 ntTSL 3 BASIC3.2□□□□□ -1.9
Nkx2-4Q9EQM3 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC3.2□□□□□ -1.9
Nkx2-4Q9EQM3 Gm12976-202ENSMUST00000153817 412 ntTSL 3 BASIC3.2□□□□□ -1.9
Nkx2-4Q9EQM3 Gm22141-201ENSMUST00000157403 277 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms