Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 AC134254.4-201ENSMUST00000223086 370 ntBASIC0.8□□□□□ -2.28
Col6a6Q8C6K9 Il1f8-201ENSMUST00000028363 1217 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
Col6a6Q8C6K9 Tmem69-201ENSMUST00000069674 974 ntAPPRIS P1 TSL 2 BASIC0.8□□□□□ -2.28
Col6a6Q8C6K9 Gm14363-201ENSMUST00000122304 409 ntBASIC0.8□□□□□ -2.28
Col6a6Q8C6K9 Gm1989-201ENSMUST00000126244 636 ntBASIC0.8□□□□□ -2.28
Col6a6Q8C6K9 Vmn1r-ps26-201ENSMUST00000174239 840 ntBASIC0.8□□□□□ -2.28
Col6a6Q8C6K9 Mir3109-201ENSMUST00000175301 88 ntBASIC0.8□□□□□ -2.28
Col6a6Q8C6K9 Mir5124a-201ENSMUST00000175528 72 ntBASIC0.8□□□□□ -2.28
Col6a6Q8C6K9 Gm6590-201ENSMUST00000203343 687 ntBASIC0.8□□□□□ -2.28
Col6a6Q8C6K9 Gm18598-201ENSMUST00000207724 597 ntBASIC0.8□□□□□ -2.28
Col6a6Q8C6K9 CT030166.2-201ENSMUST00000222021 368 ntBASIC0.8□□□□□ -2.28
Col6a6Q8C6K9 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC0.8□□□□□ -2.28
Col6a6Q8C6K9 Gm9318-201ENSMUST00000222444 438 ntBASIC0.8□□□□□ -2.28
Col6a6Q8C6K9 Gm23247-201ENSMUST00000083373 107 ntBASIC0.8□□□□□ -2.28
Col6a6Q8C6K9 Gm36989-201ENSMUST00000193225 2160 ntBASIC0.8□□□□□ -2.28
Col6a6Q8C6K9 Igkv13-87-201ENSMUST00000114214 286 ntBASIC0.79□□□□□ -2.28
Col6a6Q8C6K9 Gm14073-201ENSMUST00000117344 381 ntBASIC0.79□□□□□ -2.28
Col6a6Q8C6K9 Gm12646-201ENSMUST00000119144 238 ntBASIC0.79□□□□□ -2.28
Col6a6Q8C6K9 Gm15037-201ENSMUST00000120358 259 ntBASIC0.79□□□□□ -2.28
Col6a6Q8C6K9 Gm14591-201ENSMUST00000120407 518 ntBASIC0.79□□□□□ -2.28
Col6a6Q8C6K9 Gm16129-201ENSMUST00000152628 486 ntBASIC0.79□□□□□ -2.28
Col6a6Q8C6K9 Gm22037-201ENSMUST00000157280 296 ntBASIC0.79□□□□□ -2.28
Col6a6Q8C6K9 Gm24262-201ENSMUST00000157431 144 ntBASIC0.79□□□□□ -2.28
Col6a6Q8C6K9 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
Col6a6Q8C6K9 Gm16289-201ENSMUST00000162079 183 ntBASIC0.79□□□□□ -2.28
Col6a6Q8C6K9 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
Col6a6Q8C6K9 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
Col6a6Q8C6K9 Mir6402-201ENSMUST00000183406 80 ntBASIC0.79□□□□□ -2.28
Col6a6Q8C6K9 Gm27980-201ENSMUST00000184094 169 ntBASIC0.79□□□□□ -2.28
Col6a6Q8C6K9 1700006F04Rik-201ENSMUST00000188582 441 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
Col6a6Q8C6K9 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC0.79□□□□□ -2.28
Col6a6Q8C6K9 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC0.79□□□□□ -2.28
Col6a6Q8C6K9 Gm44446-201ENSMUST00000204864 255 ntBASIC0.79□□□□□ -2.28
Col6a6Q8C6K9 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC0.79□□□□□ -2.28
Col6a6Q8C6K9 AC069074.1-201ENSMUST00000220048 381 ntBASIC0.79□□□□□ -2.28
Col6a6Q8C6K9 Gm9472-201ENSMUST00000221625 526 ntBASIC0.79□□□□□ -2.28
Col6a6Q8C6K9 CT485608.2-201ENSMUST00000227210 291 ntBASIC0.79□□□□□ -2.28
Col6a6Q8C6K9 Gm15421-201ENSMUST00000051985 443 ntTSL 3 BASIC0.79□□□□□ -2.28
Col6a6Q8C6K9 Tas2r113-201ENSMUST00000079035 930 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
Col6a6Q8C6K9 Gm24144-201ENSMUST00000082632 111 ntBASIC0.79□□□□□ -2.28
Col6a6Q8C6K9 Gm7869-201ENSMUST00000121457 1322 ntBASIC0.79□□□□□ -2.28
Col6a6Q8C6K9 BC117090-201ENSMUST00000114850 387 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.28
Col6a6Q8C6K9 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC0.78□□□□□ -2.28
Col6a6Q8C6K9 Gm11854-201ENSMUST00000117839 446 ntBASIC0.78□□□□□ -2.28
Col6a6Q8C6K9 Gm12191-201ENSMUST00000118307 348 ntBASIC0.78□□□□□ -2.28
Col6a6Q8C6K9 Gm4910-201ENSMUST00000119605 366 ntBASIC0.78□□□□□ -2.28
Col6a6Q8C6K9 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC0.78□□□□□ -2.28
Col6a6Q8C6K9 Gm11359-201ENSMUST00000120039 567 ntBASIC0.78□□□□□ -2.28
Col6a6Q8C6K9 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC0.78□□□□□ -2.28
Col6a6Q8C6K9 Gm22483-201ENSMUST00000157986 274 ntBASIC0.78□□□□□ -2.28
Col6a6Q8C6K9 Gm22315-201ENSMUST00000158010 143 ntBASIC0.78□□□□□ -2.28
Col6a6Q8C6K9 Gm22431-201ENSMUST00000158545 107 ntBASIC0.78□□□□□ -2.28
Col6a6Q8C6K9 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC0.78□□□□□ -2.28
Col6a6Q8C6K9 Gm8207-201ENSMUST00000171204 502 ntBASIC0.78□□□□□ -2.28
Col6a6Q8C6K9 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC0.78□□□□□ -2.28
Col6a6Q8C6K9 Gm38353-201ENSMUST00000192351 617 ntTSL 3 BASIC0.78□□□□□ -2.28
Col6a6Q8C6K9 Ighv1-6-201ENSMUST00000193849 293 ntBASIC0.78□□□□□ -2.28
Col6a6Q8C6K9 Gm29920-201ENSMUST00000206876 754 ntBASIC0.78□□□□□ -2.28
Col6a6Q8C6K9 AC161758.2-201ENSMUST00000228513 218 ntBASIC0.78□□□□□ -2.28
Col6a6Q8C6K9 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC0.78□□□□□ -2.28
Col6a6Q8C6K9 Olfr969-202ENSMUST00000213266 1597 ntAPPRIS P1 TSL 2 BASIC0.78□□□□□ -2.28
Col6a6Q8C6K9 Gm16400-201ENSMUST00000116523 1029 ntBASIC0.78□□□□□ -2.28
Col6a6Q8C6K9 Gm16411-201ENSMUST00000122164 1100 ntBASIC0.78□□□□□ -2.28
Col6a6Q8C6K9 Gm23312-201ENSMUST00000158774 102 ntBASIC0.78□□□□□ -2.28
Col6a6Q8C6K9 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC0.78□□□□□ -2.28
Col6a6Q8C6K9 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
Col6a6Q8C6K9 Igkv11-114-201ENSMUST00000200013 346 ntBASIC0.78□□□□□ -2.28
Col6a6Q8C6K9 Olfr886-ps1-201ENSMUST00000212395 708 ntBASIC0.78□□□□□ -2.28
Col6a6Q8C6K9 CT033785.1-201ENSMUST00000224872 272 ntBASIC0.78□□□□□ -2.28
Col6a6Q8C6K9 Senp7-201ENSMUST00000049128 1190 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
Col6a6Q8C6K9 Olfr835-202ENSMUST00000213018 2690 ntAPPRIS P1 TSL 5 BASIC0.78□□□□□ -2.28
Col6a6Q8C6K9 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC0.78□□□□□ -2.29
Col6a6Q8C6K9 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC0.78□□□□□ -2.29
Col6a6Q8C6K9 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC0.77□□□□□ -2.29
Col6a6Q8C6K9 Gm14355-201ENSMUST00000117352 264 ntBASIC0.77□□□□□ -2.29
Col6a6Q8C6K9 Usp46os1-201ENSMUST00000129275 508 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
Col6a6Q8C6K9 Gm14651-201ENSMUST00000147192 442 ntBASIC0.77□□□□□ -2.29
Col6a6Q8C6K9 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC0.77□□□□□ -2.29
Col6a6Q8C6K9 U6.1-201ENSMUST00000157443 101 ntBASIC0.77□□□□□ -2.29
Col6a6Q8C6K9 Sult3a2-201ENSMUST00000165904 882 ntAPPRIS P1 TSL 5 BASIC0.77□□□□□ -2.29
Col6a6Q8C6K9 Igkv2-95-2-201ENSMUST00000166362 222 ntBASIC0.77□□□□□ -2.29
Col6a6Q8C6K9 Gm18416-201ENSMUST00000175635 1003 ntBASIC0.77□□□□□ -2.29
Col6a6Q8C6K9 Obox4-ps3-201ENSMUST00000183474 520 ntBASIC0.77□□□□□ -2.29
Col6a6Q8C6K9 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC0.77□□□□□ -2.29
Col6a6Q8C6K9 Gm42774-201ENSMUST00000198854 283 ntBASIC0.77□□□□□ -2.29
Col6a6Q8C6K9 Mir7215-201ENSMUST00000200383 51 ntBASIC0.77□□□□□ -2.29
Col6a6Q8C6K9 Gm44794-201ENSMUST00000206550 411 ntBASIC0.77□□□□□ -2.29
Col6a6Q8C6K9 AC115047.1-201ENSMUST00000213795 322 ntBASIC0.77□□□□□ -2.29
Col6a6Q8C6K9 AC147256.1-201ENSMUST00000221589 626 ntTSL 3 BASIC0.77□□□□□ -2.29
Col6a6Q8C6K9 AC165284.1-201ENSMUST00000228614 458 ntBASIC0.77□□□□□ -2.29
Col6a6Q8C6K9 Gm10778-201ENSMUST00000105315 1497 ntTSL 5 BASIC0.77□□□□□ -2.29
Col6a6Q8C6K9 Gm4767-201ENSMUST00000099439 1497 ntTSL 5 BASIC0.77□□□□□ -2.29
Col6a6Q8C6K9 Gm24551-201ENSMUST00000158645 92 ntBASIC0.77□□□□□ -2.29
Col6a6Q8C6K9 Gm26363-201ENSMUST00000158866 83 ntBASIC0.77□□□□□ -2.29
Col6a6Q8C6K9 Gm17038-201ENSMUST00000166586 494 ntBASIC0.77□□□□□ -2.29
Col6a6Q8C6K9 Vmn2r-ps80-201ENSMUST00000173697 914 ntBASIC0.77□□□□□ -2.29
Col6a6Q8C6K9 Gm20386-201ENSMUST00000174010 132 ntBASIC0.77□□□□□ -2.29
Col6a6Q8C6K9 Gm22131-201ENSMUST00000178415 94 ntBASIC0.77□□□□□ -2.29
Col6a6Q8C6K9 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
Col6a6Q8C6K9 Gm27419-201ENSMUST00000184576 109 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 76,532 protein–RNA pairs in 83 ms