Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Vmn2r-ps47-201ENSMUST00000174515 2557 ntBASIC4.48□□□□□ -1.69
Prpf40bQ80W14 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Prpf40bQ80W14 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Prpf40bQ80W14 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Prpf40bQ80W14 Olfr44-202ENSMUST00000215065 3578 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
Prpf40bQ80W14 Uty-205ENSMUST00000143286 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
Prpf40bQ80W14 Olfr575-203ENSMUST00000216420 3500 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Prpf40bQ80W14 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
Prpf40bQ80W14 Gm24671-201ENSMUST00000104159 158 ntBASIC4.47□□□□□ -1.69
Prpf40bQ80W14 Gm25436-201ENSMUST00000158275 145 ntBASIC4.47□□□□□ -1.69
Prpf40bQ80W14 Gm22531-201ENSMUST00000158819 140 ntBASIC4.47□□□□□ -1.69
Prpf40bQ80W14 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC4.47□□□□□ -1.69
Prpf40bQ80W14 Gm28755-201ENSMUST00000185773 199 ntBASIC4.47□□□□□ -1.69
Prpf40bQ80W14 1700121L16Rik-201ENSMUST00000189166 561 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Prpf40bQ80W14 Gm37300-201ENSMUST00000193327 280 ntBASIC4.47□□□□□ -1.69
Prpf40bQ80W14 Gm38332-201ENSMUST00000194189 147 ntBASIC4.47□□□□□ -1.69
Prpf40bQ80W14 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC4.47□□□□□ -1.69
Prpf40bQ80W14 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC4.47□□□□□ -1.69
Prpf40bQ80W14 Olfr1484-204ENSMUST00000216014 3842 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
Prpf40bQ80W14 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC4.47□□□□□ -1.69
Prpf40bQ80W14 9430025C20Rik-201ENSMUST00000068663 2115 ntBASIC4.47□□□□□ -1.69
Prpf40bQ80W14 Mir128-1-201ENSMUST00000083586 70 ntBASIC4.47□□□□□ -1.69
Prpf40bQ80W14 Vwc2l-203ENSMUST00000161937 4323 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Prpf40bQ80W14 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Prpf40bQ80W14 Ocrl-202ENSMUST00000115013 2910 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Prpf40bQ80W14 Olfr418-202ENSMUST00000213420 4388 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Prpf40bQ80W14 Olfr1280-203ENSMUST00000219291 6883 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
Prpf40bQ80W14 Ankar-201ENSMUST00000053499 4571 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
Prpf40bQ80W14 Gm14062-201ENSMUST00000134795 4134 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Prpf40bQ80W14 Ndst4-204ENSMUST00000173932 7417 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Prpf40bQ80W14 Vmn2r48-201ENSMUST00000165611 2568 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Prpf40bQ80W14 St8sia4-204ENSMUST00000189556 10027 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Prpf40bQ80W14 Gm37777-201ENSMUST00000195546 3366 ntBASIC4.47□□□□□ -1.69
Prpf40bQ80W14 Gm10811-201ENSMUST00000221985 2448 ntBASIC4.46□□□□□ -1.69
Prpf40bQ80W14 Olfr1249-202ENSMUST00000216124 3047 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
Prpf40bQ80W14 Cp-205ENSMUST00000108329 4564 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
Prpf40bQ80W14 Gm17067-201ENSMUST00000166837 3673 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Prpf40bQ80W14 Arhgap12-205ENSMUST00000182066 4506 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
Prpf40bQ80W14 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Prpf40bQ80W14 Trav8-1-201ENSMUST00000103643 328 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Prpf40bQ80W14 Gm25875-201ENSMUST00000104323 107 ntBASIC4.46□□□□□ -1.7
Prpf40bQ80W14 Mir881-201ENSMUST00000104844 78 ntBASIC4.46□□□□□ -1.7
Prpf40bQ80W14 Gm15180-201ENSMUST00000117745 492 ntBASIC4.46□□□□□ -1.7
Prpf40bQ80W14 Gm14551-201ENSMUST00000120802 256 ntBASIC4.46□□□□□ -1.7
Prpf40bQ80W14 Gm15223-201ENSMUST00000120989 826 ntBASIC4.46□□□□□ -1.7
Prpf40bQ80W14 Gm7618-201ENSMUST00000121643 171 ntBASIC4.46□□□□□ -1.7
Prpf40bQ80W14 Gm12412-201ENSMUST00000121867 328 ntBASIC4.46□□□□□ -1.7
Prpf40bQ80W14 Gm15986-201ENSMUST00000122153 400 ntBASIC4.46□□□□□ -1.7
Prpf40bQ80W14 Gm22107-201ENSMUST00000122548 100 ntBASIC4.46□□□□□ -1.7
Prpf40bQ80W14 n-R5s68-201ENSMUST00000122639 82 ntBASIC4.46□□□□□ -1.7
Prpf40bQ80W14 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Prpf40bQ80W14 Mir1934-201ENSMUST00000158127 83 ntBASIC4.46□□□□□ -1.7
Prpf40bQ80W14 Gm22433-201ENSMUST00000158550 142 ntBASIC4.46□□□□□ -1.7
Prpf40bQ80W14 Gm23474-201ENSMUST00000158884 75 ntBASIC4.46□□□□□ -1.7
Prpf40bQ80W14 Mir6383-201ENSMUST00000184545 116 ntBASIC4.46□□□□□ -1.7
Prpf40bQ80W14 Gm17966-201ENSMUST00000193453 594 ntBASIC4.46□□□□□ -1.7
Prpf40bQ80W14 Gm37617-201ENSMUST00000194309 159 ntBASIC4.46□□□□□ -1.7
Prpf40bQ80W14 Gm4644-201ENSMUST00000197587 400 ntBASIC4.46□□□□□ -1.7
Prpf40bQ80W14 Gm6615-201ENSMUST00000199426 631 ntBASIC4.46□□□□□ -1.7
Prpf40bQ80W14 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Prpf40bQ80W14 Gm44030-201ENSMUST00000204865 432 ntBASIC4.46□□□□□ -1.7
Prpf40bQ80W14 Gm45031-201ENSMUST00000206800 288 ntBASIC4.46□□□□□ -1.7
Prpf40bQ80W14 Gm6240-201ENSMUST00000208014 473 ntBASIC4.46□□□□□ -1.7
Prpf40bQ80W14 Gm45420-201ENSMUST00000211243 425 ntBASIC4.46□□□□□ -1.7
Prpf40bQ80W14 Olfr1205-202ENSMUST00000215929 6149 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
Prpf40bQ80W14 Olfr959-202ENSMUST00000215194 4339 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Prpf40bQ80W14 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
Prpf40bQ80W14 Mga-204ENSMUST00000110774 13931 ntAPPRIS P3 TSL 5 BASIC4.46□□□□□ -1.7
Prpf40bQ80W14 Gm38265-201ENSMUST00000193479 3766 ntBASIC4.45□□□□□ -1.7
Prpf40bQ80W14 Lrp1b-201ENSMUST00000052550 16294 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Prpf40bQ80W14 Gm43508-201ENSMUST00000197251 3783 ntBASIC4.45□□□□□ -1.7
Prpf40bQ80W14 Gm25162-201ENSMUST00000158906 159 ntBASIC4.45□□□□□ -1.7
Prpf40bQ80W14 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC4.45□□□□□ -1.7
Prpf40bQ80W14 Gm16303-201ENSMUST00000161498 390 ntBASIC4.45□□□□□ -1.7
Prpf40bQ80W14 Ubl5-209ENSMUST00000161882 489 ntTSL 3 BASIC4.45□□□□□ -1.7
Prpf40bQ80W14 Mir6917-201ENSMUST00000184111 61 ntBASIC4.45□□□□□ -1.7
Prpf40bQ80W14 Gm29334-201ENSMUST00000190334 357 ntBASIC4.45□□□□□ -1.7
Prpf40bQ80W14 Gm43250-201ENSMUST00000196536 273 ntBASIC4.45□□□□□ -1.7
Prpf40bQ80W14 Gm44322-201ENSMUST00000196830 115 ntBASIC4.45□□□□□ -1.7
Prpf40bQ80W14 Mir3535-201ENSMUST00000197651 147 ntBASIC4.45□□□□□ -1.7
Prpf40bQ80W14 Gm44600-201ENSMUST00000208540 111 ntBASIC4.45□□□□□ -1.7
Prpf40bQ80W14 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Prpf40bQ80W14 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Prpf40bQ80W14 Gm25698-201ENSMUST00000082897 107 ntBASIC4.45□□□□□ -1.7
Prpf40bQ80W14 Gm23297-201ENSMUST00000083184 127 ntBASIC4.45□□□□□ -1.7
Prpf40bQ80W14 Gm23042-201ENSMUST00000083866 101 ntBASIC4.45□□□□□ -1.7
Prpf40bQ80W14 Gpr34-202ENSMUST00000096492 1898 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Prpf40bQ80W14 Olfr729-202ENSMUST00000213163 4283 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Prpf40bQ80W14 Olfr1251-202ENSMUST00000214639 3071 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Prpf40bQ80W14 Olfr354-202ENSMUST00000217479 9539 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Prpf40bQ80W14 Erbin-207ENSMUST00000191275 5552 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
Prpf40bQ80W14 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
Prpf40bQ80W14 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC4.44□□□□□ -1.7
Prpf40bQ80W14 Skint3-201ENSMUST00000038455 3627 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
Prpf40bQ80W14 Mgat4e-202ENSMUST00000172898 1735 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
Prpf40bQ80W14 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Prpf40bQ80W14 Gm11645-201ENSMUST00000121589 649 ntBASIC4.44□□□□□ -1.7
Prpf40bQ80W14 Gm22482-201ENSMUST00000122563 359 ntBASIC4.44□□□□□ -1.7
Prpf40bQ80W14 Gm25450-201ENSMUST00000179144 107 ntBASIC4.44□□□□□ -1.7
Prpf40bQ80W14 Mir6938-201ENSMUST00000184173 63 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 104.9 ms