Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm37630-201ENSMUST00000194210 1456 ntBASIC2□□□□□ -2.09
Upf3bQ3ULL6 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
Upf3bQ3ULL6 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC1.99□□□□□ -2.09
Upf3bQ3ULL6 Gm22750-201ENSMUST00000102076 103 ntBASIC1.99□□□□□ -2.09
Upf3bQ3ULL6 Gm14670-201ENSMUST00000117327 337 ntBASIC1.99□□□□□ -2.09
Upf3bQ3ULL6 Gm13355-201ENSMUST00000117996 317 ntBASIC1.99□□□□□ -2.09
Upf3bQ3ULL6 Gm11935-201ENSMUST00000118608 399 ntBASIC1.99□□□□□ -2.09
Upf3bQ3ULL6 Gm6444-201ENSMUST00000119611 458 ntBASIC1.99□□□□□ -2.09
Upf3bQ3ULL6 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC1.99□□□□□ -2.09
Upf3bQ3ULL6 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC1.99□□□□□ -2.09
Upf3bQ3ULL6 Gm23538-201ENSMUST00000157535 101 ntBASIC1.99□□□□□ -2.09
Upf3bQ3ULL6 Defa27-201ENSMUST00000167683 282 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
Upf3bQ3ULL6 Gm25873-201ENSMUST00000180317 107 ntBASIC1.99□□□□□ -2.09
Upf3bQ3ULL6 Gm27544-201ENSMUST00000185069 155 ntBASIC1.99□□□□□ -2.09
Upf3bQ3ULL6 Mir7215-201ENSMUST00000200383 51 ntBASIC1.99□□□□□ -2.09
Upf3bQ3ULL6 Gm44524-201ENSMUST00000203899 271 ntBASIC1.99□□□□□ -2.09
Upf3bQ3ULL6 Gm9377-201ENSMUST00000207227 623 ntBASIC1.99□□□□□ -2.09
Upf3bQ3ULL6 Gm19140-201ENSMUST00000209790 421 ntBASIC1.99□□□□□ -2.09
Upf3bQ3ULL6 Olfr1454-201ENSMUST00000073732 924 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
Upf3bQ3ULL6 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
Upf3bQ3ULL6 Gm23645-201ENSMUST00000083228 108 ntBASIC1.99□□□□□ -2.09
Upf3bQ3ULL6 Snord14d-201ENSMUST00000083424 86 ntBASIC1.99□□□□□ -2.09
Upf3bQ3ULL6 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC1.98□□□□□ -2.09
Upf3bQ3ULL6 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
Upf3bQ3ULL6 Gm14868-201ENSMUST00000117840 216 ntBASIC1.98□□□□□ -2.09
Upf3bQ3ULL6 Gm15896-201ENSMUST00000118045 440 ntBASIC1.98□□□□□ -2.09
Upf3bQ3ULL6 n-R5s189-201ENSMUST00000122675 114 ntBASIC1.98□□□□□ -2.09
Upf3bQ3ULL6 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
Upf3bQ3ULL6 Gm25874-201ENSMUST00000178030 79 ntBASIC1.98□□□□□ -2.09
Upf3bQ3ULL6 Gm37029-201ENSMUST00000195773 239 ntBASIC1.98□□□□□ -2.09
Upf3bQ3ULL6 Gm23370-202ENSMUST00000197008 129 ntBASIC1.98□□□□□ -2.09
Upf3bQ3ULL6 Gm44988-201ENSMUST00000203835 1161 ntBASIC1.98□□□□□ -2.09
Upf3bQ3ULL6 Gm44794-201ENSMUST00000206550 411 ntBASIC1.98□□□□□ -2.09
Upf3bQ3ULL6 Olfr1468-ps1-201ENSMUST00000207287 1208 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
Upf3bQ3ULL6 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC1.98□□□□□ -2.09
Upf3bQ3ULL6 AC154252.1-201ENSMUST00000226041 473 ntBASIC1.98□□□□□ -2.09
Upf3bQ3ULL6 Gm24610-201ENSMUST00000083270 109 ntBASIC1.98□□□□□ -2.09
Upf3bQ3ULL6 Sult3a1-201ENSMUST00000092597 1047 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
Upf3bQ3ULL6 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
Upf3bQ3ULL6 Gm14445-201ENSMUST00000117051 1484 ntBASIC1.97□□□□□ -2.09
Upf3bQ3ULL6 Gm15312-201ENSMUST00000118827 271 ntBASIC1.97□□□□□ -2.09
Upf3bQ3ULL6 Cox20-ps-201ENSMUST00000119872 353 ntBASIC1.97□□□□□ -2.09
Upf3bQ3ULL6 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC1.97□□□□□ -2.09
Upf3bQ3ULL6 Gm15692-201ENSMUST00000152173 352 ntBASIC1.97□□□□□ -2.09
Upf3bQ3ULL6 Gm13661-201ENSMUST00000154297 318 ntTSL 3 BASIC1.97□□□□□ -2.09
Upf3bQ3ULL6 Gm25996-201ENSMUST00000175393 117 ntBASIC1.97□□□□□ -2.09
Upf3bQ3ULL6 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
Upf3bQ3ULL6 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC1.97□□□□□ -2.09
Upf3bQ3ULL6 Mir6995-201ENSMUST00000183658 71 ntBASIC1.97□□□□□ -2.09
Upf3bQ3ULL6 Gm28000-201ENSMUST00000184380 85 ntBASIC1.97□□□□□ -2.09
Upf3bQ3ULL6 Gm5329-201ENSMUST00000186898 463 ntBASIC1.97□□□□□ -2.09
Upf3bQ3ULL6 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC1.97□□□□□ -2.09
Upf3bQ3ULL6 Gm20304-201ENSMUST00000218168 444 ntBASIC1.97□□□□□ -2.09
Upf3bQ3ULL6 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
Upf3bQ3ULL6 AC125488.1-201ENSMUST00000219586 212 ntBASIC1.97□□□□□ -2.09
Upf3bQ3ULL6 AC168880.1-201ENSMUST00000225113 707 ntBASIC1.97□□□□□ -2.09
Upf3bQ3ULL6 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
Upf3bQ3ULL6 Gm36989-201ENSMUST00000193225 2160 ntBASIC1.96□□□□□ -2.1
Upf3bQ3ULL6 AC125532.1-201ENSMUST00000216210 2334 ntBASIC1.96□□□□□ -2.1
Upf3bQ3ULL6 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
Upf3bQ3ULL6 Gm25090-201ENSMUST00000104000 132 ntBASIC1.96□□□□□ -2.1
Upf3bQ3ULL6 Gm25485-201ENSMUST00000104120 132 ntBASIC1.96□□□□□ -2.1
Upf3bQ3ULL6 Gm24340-201ENSMUST00000104208 97 ntBASIC1.96□□□□□ -2.1
Upf3bQ3ULL6 Gm12507-201ENSMUST00000119155 415 ntBASIC1.96□□□□□ -2.1
Upf3bQ3ULL6 Gm25961-201ENSMUST00000157174 135 ntBASIC1.96□□□□□ -2.1
Upf3bQ3ULL6 Gm25392-201ENSMUST00000157335 297 ntBASIC1.96□□□□□ -2.1
Upf3bQ3ULL6 Gm24783-201ENSMUST00000157639 100 ntBASIC1.96□□□□□ -2.1
Upf3bQ3ULL6 Gm24056-201ENSMUST00000158617 146 ntBASIC1.96□□□□□ -2.1
Upf3bQ3ULL6 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC1.96□□□□□ -2.1
Upf3bQ3ULL6 Gm17062-201ENSMUST00000166987 461 ntBASIC1.96□□□□□ -2.1
Upf3bQ3ULL6 Gm21744-201ENSMUST00000178403 662 ntBASIC1.96□□□□□ -2.1
Upf3bQ3ULL6 Gm21171-201ENSMUST00000180048 673 ntBASIC1.96□□□□□ -2.1
Upf3bQ3ULL6 Gm24137-201ENSMUST00000180055 79 ntBASIC1.96□□□□□ -2.1
Upf3bQ3ULL6 Gm22391-201ENSMUST00000180356 79 ntBASIC1.96□□□□□ -2.1
Upf3bQ3ULL6 Mir7678-201ENSMUST00000185076 71 ntBASIC1.96□□□□□ -2.1
Upf3bQ3ULL6 Gm29413-201ENSMUST00000186019 880 ntBASIC1.96□□□□□ -2.1
Upf3bQ3ULL6 Gm28870-201ENSMUST00000187033 880 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
Upf3bQ3ULL6 Gm28700-201ENSMUST00000187614 579 ntBASIC1.96□□□□□ -2.1
Upf3bQ3ULL6 Gm29639-201ENSMUST00000188375 580 ntBASIC1.96□□□□□ -2.1
Upf3bQ3ULL6 Gm28843-201ENSMUST00000189198 678 ntBASIC1.96□□□□□ -2.1
Upf3bQ3ULL6 Gm29546-201ENSMUST00000191171 678 ntBASIC1.96□□□□□ -2.1
Upf3bQ3ULL6 Gm18964-201ENSMUST00000193013 563 ntBASIC1.96□□□□□ -2.1
Upf3bQ3ULL6 Mir7021-201ENSMUST00000197026 63 ntBASIC1.96□□□□□ -2.1
Upf3bQ3ULL6 Gm30275-202ENSMUST00000198124 416 ntTSL 3 BASIC1.96□□□□□ -2.1
Upf3bQ3ULL6 Gm45387-201ENSMUST00000209792 632 ntBASIC1.96□□□□□ -2.1
Upf3bQ3ULL6 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC1.96□□□□□ -2.1
Upf3bQ3ULL6 AC163289.1-201ENSMUST00000215919 262 ntBASIC1.96□□□□□ -2.1
Upf3bQ3ULL6 Gm46994-201ENSMUST00000221523 219 ntBASIC1.96□□□□□ -2.1
Upf3bQ3ULL6 Gm5955-201ENSMUST00000222712 219 ntBASIC1.96□□□□□ -2.1
Upf3bQ3ULL6 Gm6109-201ENSMUST00000223297 348 ntBASIC1.96□□□□□ -2.1
Upf3bQ3ULL6 Olfr802-201ENSMUST00000074713 939 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
Upf3bQ3ULL6 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
Upf3bQ3ULL6 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
Upf3bQ3ULL6 Gm15183-201ENSMUST00000118933 348 ntBASIC1.95□□□□□ -2.1
Upf3bQ3ULL6 Gm14770-201ENSMUST00000122197 312 ntBASIC1.95□□□□□ -2.1
Upf3bQ3ULL6 Gm24858-201ENSMUST00000158058 323 ntBASIC1.95□□□□□ -2.1
Upf3bQ3ULL6 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
Upf3bQ3ULL6 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC1.95□□□□□ -2.1
Upf3bQ3ULL6 Gm27245-201ENSMUST00000184385 376 ntBASIC1.95□□□□□ -2.1
Upf3bQ3ULL6 Gm27991-201ENSMUST00000184804 137 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 76,532 protein–RNA pairs in 109.5 ms