Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 Gm18658-201ENSMUST00000195558 270 ntBASIC3.86□□□□□ -1.79
Msx2Q03358 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC3.86□□□□□ -1.79
Msx2Q03358 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC3.86□□□□□ -1.79
Msx2Q03358 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Msx2Q03358 AC138401.2-201ENSMUST00000220461 365 ntBASIC3.86□□□□□ -1.79
Msx2Q03358 CT010449.1-201ENSMUST00000220624 153 ntBASIC3.86□□□□□ -1.79
Msx2Q03358 CT010506.3-201ENSMUST00000223699 410 ntBASIC3.86□□□□□ -1.79
Msx2Q03358 Gm23517-201ENSMUST00000082830 192 ntBASIC3.86□□□□□ -1.79
Msx2Q03358 Gm25147-201ENSMUST00000083030 105 ntBASIC3.86□□□□□ -1.79
Msx2Q03358 Mir133a-1-201ENSMUST00000083465 68 ntBASIC3.86□□□□□ -1.79
Msx2Q03358 Gm36960-201ENSMUST00000195491 2035 ntBASIC3.86□□□□□ -1.79
Msx2Q03358 Olfr769-203ENSMUST00000216906 4325 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Msx2Q03358 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Msx2Q03358 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
Msx2Q03358 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Msx2Q03358 Olfr577-202ENSMUST00000214080 3282 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Msx2Q03358 Wac-217ENSMUST00000172018 1965 ntTSL 5 BASIC3.85□□□□□ -1.79
Msx2Q03358 Gm24117-201ENSMUST00000103973 133 ntBASIC3.85□□□□□ -1.79
Msx2Q03358 Gm6829-201ENSMUST00000119858 360 ntBASIC3.85□□□□□ -1.79
Msx2Q03358 Gm12617-201ENSMUST00000121268 381 ntBASIC3.85□□□□□ -1.79
Msx2Q03358 Gm22107-201ENSMUST00000122548 100 ntBASIC3.85□□□□□ -1.79
Msx2Q03358 Gm22453-201ENSMUST00000122801 318 ntBASIC3.85□□□□□ -1.79
Msx2Q03358 Gm12238-201ENSMUST00000127764 124 ntBASIC3.85□□□□□ -1.79
Msx2Q03358 Gm15949-201ENSMUST00000129485 126 ntTSL 3 BASIC3.85□□□□□ -1.79
Msx2Q03358 Gm23956-201ENSMUST00000157211 119 ntBASIC3.85□□□□□ -1.79
Msx2Q03358 Gm26414-201ENSMUST00000157674 269 ntBASIC3.85□□□□□ -1.79
Msx2Q03358 Gm13249-201ENSMUST00000177803 345 ntBASIC3.85□□□□□ -1.79
Msx2Q03358 Gm13144-201ENSMUST00000179385 345 ntBASIC3.85□□□□□ -1.79
Msx2Q03358 Mir6943-201ENSMUST00000185186 66 ntBASIC3.85□□□□□ -1.79
Msx2Q03358 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC3.85□□□□□ -1.79
Msx2Q03358 Gm29428-201ENSMUST00000190086 409 ntBASIC3.85□□□□□ -1.79
Msx2Q03358 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC3.85□□□□□ -1.79
Msx2Q03358 Gm29704-201ENSMUST00000196011 253 ntBASIC3.85□□□□□ -1.79
Msx2Q03358 Gm9238-201ENSMUST00000196181 329 ntBASIC3.85□□□□□ -1.79
Msx2Q03358 Gm43193-201ENSMUST00000197732 441 ntBASIC3.85□□□□□ -1.79
Msx2Q03358 Gm43955-201ENSMUST00000204332 142 ntBASIC3.85□□□□□ -1.79
Msx2Q03358 AC165293.1-201ENSMUST00000219669 329 ntBASIC3.85□□□□□ -1.79
Msx2Q03358 Gm7065-201ENSMUST00000222150 474 ntBASIC3.85□□□□□ -1.79
Msx2Q03358 AC121942.2-201ENSMUST00000223824 600 ntBASIC3.85□□□□□ -1.79
Msx2Q03358 Gm24148-201ENSMUST00000082762 80 ntBASIC3.85□□□□□ -1.79
Msx2Q03358 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Msx2Q03358 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
Msx2Q03358 Gm37498-201ENSMUST00000193524 4002 ntBASIC3.85□□□□□ -1.79
Msx2Q03358 Lrrtm2-201ENSMUST00000091636 5665 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Msx2Q03358 Cd86-201ENSMUST00000089620 2539 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Msx2Q03358 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC3.85□□□□□ -1.79
Msx2Q03358 AC126033.1-201ENSMUST00000227628 6773 ntBASIC3.85□□□□□ -1.79
Msx2Q03358 Gm37792-201ENSMUST00000195761 3413 ntBASIC3.85□□□□□ -1.79
Msx2Q03358 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC3.84□□□□□ -1.79
Msx2Q03358 Olfr1249-202ENSMUST00000216124 3047 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Msx2Q03358 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
Msx2Q03358 Gm5596-201ENSMUST00000207988 2421 ntBASIC3.84□□□□□ -1.79
Msx2Q03358 Dst-203ENSMUST00000115104 23279 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
Msx2Q03358 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC3.84□□□□□ -1.79
Msx2Q03358 Gm11251-201ENSMUST00000119593 2800 ntBASIC3.84□□□□□ -1.79
Msx2Q03358 Gm23472-201ENSMUST00000101806 191 ntBASIC3.84□□□□□ -1.79
Msx2Q03358 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Msx2Q03358 Igkv14-100-201ENSMUST00000103325 350 ntAPPRIS ALT2 BASIC3.84□□□□□ -1.79
Msx2Q03358 Gm26367-201ENSMUST00000104165 132 ntBASIC3.84□□□□□ -1.79
Msx2Q03358 Gm24318-201ENSMUST00000104490 131 ntBASIC3.84□□□□□ -1.79
Msx2Q03358 Gm23608-201ENSMUST00000104545 128 ntBASIC3.84□□□□□ -1.79
Msx2Q03358 Gm15517-201ENSMUST00000124863 251 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Msx2Q03358 Gm15350-201ENSMUST00000135138 569 ntTSL 2 BASIC3.84□□□□□ -1.79
Msx2Q03358 Clec9a-203ENSMUST00000164513 714 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
Msx2Q03358 Gm24084-201ENSMUST00000175173 137 ntBASIC3.84□□□□□ -1.79
Msx2Q03358 Gm24497-201ENSMUST00000177868 191 ntBASIC3.84□□□□□ -1.79
Msx2Q03358 Gm27718-201ENSMUST00000183721 86 ntBASIC3.84□□□□□ -1.79
Msx2Q03358 Gm27387-201ENSMUST00000184583 116 ntBASIC3.84□□□□□ -1.79
Msx2Q03358 Gm8599-201ENSMUST00000193033 457 ntBASIC3.84□□□□□ -1.79
Msx2Q03358 Gm30341-201ENSMUST00000194363 289 ntBASIC3.84□□□□□ -1.79
Msx2Q03358 Gm44145-201ENSMUST00000203711 172 ntTSL 3 BASIC3.84□□□□□ -1.79
Msx2Q03358 Gm30674-201ENSMUST00000214523 392 ntBASIC3.84□□□□□ -1.79
Msx2Q03358 CT010511.1-201ENSMUST00000224570 315 ntBASIC3.84□□□□□ -1.79
Msx2Q03358 AC123533.1-201ENSMUST00000227782 446 ntBASIC3.84□□□□□ -1.79
Msx2Q03358 Gm23444-201ENSMUST00000082922 191 ntBASIC3.84□□□□□ -1.79
Msx2Q03358 Iigp1-201ENSMUST00000032473 3121 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.79
Msx2Q03358 Neto2-201ENSMUST00000109686 5610 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
Msx2Q03358 Syne2-201ENSMUST00000044217 21690 ntAPPRIS P2 TSL 5 BASIC3.84□□□□□ -1.8
Msx2Q03358 Olfr1243-202ENSMUST00000144885 3148 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.8
Msx2Q03358 Gm21032-201ENSMUST00000208108 2578 ntBASIC3.83□□□□□ -1.8
Msx2Q03358 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC3.83□□□□□ -1.8
Msx2Q03358 Olfr715-202ENSMUST00000214919 5114 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Msx2Q03358 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Msx2Q03358 Mir466p-201ENSMUST00000103925 89 ntBASIC3.83□□□□□ -1.8
Msx2Q03358 Gm22899-201ENSMUST00000104540 131 ntBASIC3.83□□□□□ -1.8
Msx2Q03358 Gm23879-201ENSMUST00000116874 126 ntBASIC3.83□□□□□ -1.8
Msx2Q03358 Gm12982-201ENSMUST00000117408 190 ntBASIC3.83□□□□□ -1.8
Msx2Q03358 Gm13504-201ENSMUST00000117490 316 ntBASIC3.83□□□□□ -1.8
Msx2Q03358 Gm11366-201ENSMUST00000119279 429 ntBASIC3.83□□□□□ -1.8
Msx2Q03358 Gm11456-201ENSMUST00000121070 256 ntBASIC3.83□□□□□ -1.8
Msx2Q03358 Gm11204-201ENSMUST00000122438 147 ntBASIC3.83□□□□□ -1.8
Msx2Q03358 H2al2c-201ENSMUST00000163651 336 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Msx2Q03358 H2al2b-201ENSMUST00000168551 336 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Msx2Q03358 Gm7497-201ENSMUST00000183064 1003 ntBASIC3.83□□□□□ -1.8
Msx2Q03358 Gm27568-201ENSMUST00000184220 99 ntBASIC3.83□□□□□ -1.8
Msx2Q03358 Gm37898-201ENSMUST00000193781 174 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Msx2Q03358 Gm43978-201ENSMUST00000203491 451 ntBASIC3.83□□□□□ -1.8
Msx2Q03358 Gm45317-201ENSMUST00000210385 223 ntBASIC3.83□□□□□ -1.8
Msx2Q03358 E330011O21Rik-203ENSMUST00000210555 455 ntTSL 5 BASIC3.83□□□□□ -1.8
Msx2Q03358 Gm45907-201ENSMUST00000213023 193 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 83.9 ms