Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
PdfS4R2K0 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PdfS4R2K0 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PdfS4R2K0 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PdfS4R2K0 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
PdfS4R2K0 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PdfS4R2K0 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
PdfS4R2K0 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
PdfS4R2K0 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PdfS4R2K0 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PdfS4R2K0 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PdfS4R2K0 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PdfS4R2K0 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
PdfS4R2K0 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
PdfS4R2K0 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PdfS4R2K0 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
PdfS4R2K0 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PdfS4R2K0 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
PdfS4R2K0 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
PdfS4R2K0 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC13.14□□□□□ -0.31
PdfS4R2K0 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
PdfS4R2K0 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
PdfS4R2K0 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PdfS4R2K0 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PdfS4R2K0 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
PdfS4R2K0 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
PdfS4R2K0 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PdfS4R2K0 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
PdfS4R2K0 Gm7290-201ENSMUST00000104990 617 ntBASIC13.14□□□□□ -0.31
PdfS4R2K0 Gm12918-201ENSMUST00000120234 636 ntBASIC13.14□□□□□ -0.31
PdfS4R2K0 Gm15710-201ENSMUST00000121821 636 ntBASIC13.14□□□□□ -0.31
PdfS4R2K0 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC13.14□□□□□ -0.31
PdfS4R2K0 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC13.14□□□□□ -0.31
PdfS4R2K0 Gm5075-201ENSMUST00000196916 622 ntBASIC13.14□□□□□ -0.31
PdfS4R2K0 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC13.14□□□□□ -0.31
PdfS4R2K0 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
PdfS4R2K0 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC13.14□□□□□ -0.31
PdfS4R2K0 Ap3s1-204ENSMUST00000225520 957 ntBASIC13.14□□□□□ -0.31
PdfS4R2K0 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PdfS4R2K0 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PdfS4R2K0 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC13.14□□□□□ -0.31
PdfS4R2K0 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC13.14□□□□□ -0.31
PdfS4R2K0 Gm10602-201ENSMUST00000098239 609 ntBASIC13.14□□□□□ -0.31
PdfS4R2K0 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PdfS4R2K0 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PdfS4R2K0 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PdfS4R2K0 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PdfS4R2K0 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PdfS4R2K0 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
PdfS4R2K0 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC13.13□□□□□ -0.31
PdfS4R2K0 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC13.13□□□□□ -0.31
PdfS4R2K0 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
PdfS4R2K0 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PdfS4R2K0 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
PdfS4R2K0 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PdfS4R2K0 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PdfS4R2K0 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PdfS4R2K0 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC13.13□□□□□ -0.31
PdfS4R2K0 Gm38205-201ENSMUST00000192243 258 ntBASIC13.13□□□□□ -0.31
PdfS4R2K0 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC13.13□□□□□ -0.31
PdfS4R2K0 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
PdfS4R2K0 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PdfS4R2K0 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PdfS4R2K0 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PdfS4R2K0 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
PdfS4R2K0 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
PdfS4R2K0 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC13.13□□□□□ -0.31
PdfS4R2K0 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
PdfS4R2K0 Gm8309-201ENSMUST00000206627 1448 ntBASIC13.13□□□□□ -0.31
PdfS4R2K0 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC13.13□□□□□ -0.31
PdfS4R2K0 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
PdfS4R2K0 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
PdfS4R2K0 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PdfS4R2K0 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PdfS4R2K0 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PdfS4R2K0 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
PdfS4R2K0 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
PdfS4R2K0 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PdfS4R2K0 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
PdfS4R2K0 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
PdfS4R2K0 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PdfS4R2K0 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
PdfS4R2K0 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PdfS4R2K0 Gm26971-201ENSMUST00000182423 1072 ntBASIC13.12□□□□□ -0.31
PdfS4R2K0 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC13.12□□□□□ -0.31
PdfS4R2K0 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PdfS4R2K0 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PdfS4R2K0 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
PdfS4R2K0 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC13.12□□□□□ -0.31
PdfS4R2K0 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
PdfS4R2K0 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
PdfS4R2K0 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PdfS4R2K0 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PdfS4R2K0 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PdfS4R2K0 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
PdfS4R2K0 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
PdfS4R2K0 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
PdfS4R2K0 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
PdfS4R2K0 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
PdfS4R2K0 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms