Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.11■□□□□ 0.33
H2afb2S4R1M3 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
H2afb2S4R1M3 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
H2afb2S4R1M3 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
H2afb2S4R1M3 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
H2afb2S4R1M3 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
H2afb2S4R1M3 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
H2afb2S4R1M3 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
H2afb2S4R1M3 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
H2afb2S4R1M3 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
H2afb2S4R1M3 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
H2afb2S4R1M3 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
H2afb2S4R1M3 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
H2afb2S4R1M3 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
H2afb2S4R1M3 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
H2afb2S4R1M3 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.1■□□□□ 0.33
H2afb2S4R1M3 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
H2afb2S4R1M3 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
H2afb2S4R1M3 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
H2afb2S4R1M3 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
H2afb2S4R1M3 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
H2afb2S4R1M3 Gm17661-201ENSMUST00000170317 270 ntBASIC17.1■□□□□ 0.33
H2afb2S4R1M3 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.1■□□□□ 0.33
H2afb2S4R1M3 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.1■□□□□ 0.33
H2afb2S4R1M3 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
H2afb2S4R1M3 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
H2afb2S4R1M3 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
H2afb2S4R1M3 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
H2afb2S4R1M3 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
H2afb2S4R1M3 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
H2afb2S4R1M3 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
H2afb2S4R1M3 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
H2afb2S4R1M3 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
H2afb2S4R1M3 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
H2afb2S4R1M3 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
H2afb2S4R1M3 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
H2afb2S4R1M3 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
H2afb2S4R1M3 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
H2afb2S4R1M3 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
H2afb2S4R1M3 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.09■□□□□ 0.33
H2afb2S4R1M3 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
H2afb2S4R1M3 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
H2afb2S4R1M3 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
H2afb2S4R1M3 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
H2afb2S4R1M3 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
H2afb2S4R1M3 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
H2afb2S4R1M3 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
H2afb2S4R1M3 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
H2afb2S4R1M3 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
H2afb2S4R1M3 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
H2afb2S4R1M3 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.08■□□□□ 0.33
H2afb2S4R1M3 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
H2afb2S4R1M3 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
H2afb2S4R1M3 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
H2afb2S4R1M3 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
H2afb2S4R1M3 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
H2afb2S4R1M3 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
H2afb2S4R1M3 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
H2afb2S4R1M3 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
H2afb2S4R1M3 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
H2afb2S4R1M3 Gm38027-201ENSMUST00000192315 235 ntBASIC17.08■□□□□ 0.32
H2afb2S4R1M3 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
H2afb2S4R1M3 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
H2afb2S4R1M3 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
H2afb2S4R1M3 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
H2afb2S4R1M3 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
H2afb2S4R1M3 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
H2afb2S4R1M3 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
H2afb2S4R1M3 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
H2afb2S4R1M3 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
H2afb2S4R1M3 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
H2afb2S4R1M3 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.07■□□□□ 0.32
H2afb2S4R1M3 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.07■□□□□ 0.32
H2afb2S4R1M3 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
H2afb2S4R1M3 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.07■□□□□ 0.32
H2afb2S4R1M3 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
H2afb2S4R1M3 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
H2afb2S4R1M3 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
H2afb2S4R1M3 Gm10812-201ENSMUST00000099864 546 ntBASIC17.07■□□□□ 0.32
H2afb2S4R1M3 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
H2afb2S4R1M3 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
H2afb2S4R1M3 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
H2afb2S4R1M3 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
H2afb2S4R1M3 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
H2afb2S4R1M3 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
H2afb2S4R1M3 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
H2afb2S4R1M3 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
H2afb2S4R1M3 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
H2afb2S4R1M3 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
H2afb2S4R1M3 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
H2afb2S4R1M3 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
H2afb2S4R1M3 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
H2afb2S4R1M3 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
H2afb2S4R1M3 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
H2afb2S4R1M3 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.06■□□□□ 0.32
H2afb2S4R1M3 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.06■□□□□ 0.32
H2afb2S4R1M3 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
H2afb2S4R1M3 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.06■□□□□ 0.32
H2afb2S4R1M3 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
H2afb2S4R1M3 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms