Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
H2afb3S4R1G7 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC15.4■□□□□ 0.06
H2afb3S4R1G7 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC15.4■□□□□ 0.06
H2afb3S4R1G7 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
H2afb3S4R1G7 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC15.4■□□□□ 0.06
H2afb3S4R1G7 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
H2afb3S4R1G7 Gm15743-202ENSMUST00000182690 1901 ntBASIC15.4■□□□□ 0.06
H2afb3S4R1G7 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC15.4■□□□□ 0.06
H2afb3S4R1G7 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
H2afb3S4R1G7 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
H2afb3S4R1G7 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
H2afb3S4R1G7 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
H2afb3S4R1G7 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
H2afb3S4R1G7 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC15.4■□□□□ 0.06
H2afb3S4R1G7 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
H2afb3S4R1G7 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
H2afb3S4R1G7 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
H2afb3S4R1G7 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
H2afb3S4R1G7 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
H2afb3S4R1G7 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
H2afb3S4R1G7 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
H2afb3S4R1G7 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
H2afb3S4R1G7 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
H2afb3S4R1G7 Gm6576-201ENSMUST00000169678 883 ntBASIC15.39■□□□□ 0.05
H2afb3S4R1G7 Alkbh1-212ENSMUST00000185301 408 ntBASIC15.39■□□□□ 0.05
H2afb3S4R1G7 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
H2afb3S4R1G7 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
H2afb3S4R1G7 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC15.39■□□□□ 0.05
H2afb3S4R1G7 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
H2afb3S4R1G7 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
H2afb3S4R1G7 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
H2afb3S4R1G7 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
H2afb3S4R1G7 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
H2afb3S4R1G7 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
H2afb3S4R1G7 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
H2afb3S4R1G7 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
H2afb3S4R1G7 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
H2afb3S4R1G7 Gm45560-201ENSMUST00000211492 1472 ntBASIC15.39■□□□□ 0.05
H2afb3S4R1G7 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
H2afb3S4R1G7 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
H2afb3S4R1G7 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
H2afb3S4R1G7 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
H2afb3S4R1G7 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
H2afb3S4R1G7 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
H2afb3S4R1G7 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
H2afb3S4R1G7 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
H2afb3S4R1G7 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
H2afb3S4R1G7 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
H2afb3S4R1G7 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
H2afb3S4R1G7 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
H2afb3S4R1G7 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
H2afb3S4R1G7 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
H2afb3S4R1G7 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC15.38■□□□□ 0.05
H2afb3S4R1G7 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
H2afb3S4R1G7 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC15.38■□□□□ 0.05
H2afb3S4R1G7 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
H2afb3S4R1G7 Gm13158-201ENSMUST00000122007 736 ntBASIC15.38■□□□□ 0.05
H2afb3S4R1G7 AC164629.5-201ENSMUST00000220387 632 ntBASIC15.38■□□□□ 0.05
H2afb3S4R1G7 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
H2afb3S4R1G7 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
H2afb3S4R1G7 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
H2afb3S4R1G7 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
H2afb3S4R1G7 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
H2afb3S4R1G7 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
H2afb3S4R1G7 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
H2afb3S4R1G7 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
H2afb3S4R1G7 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
H2afb3S4R1G7 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
H2afb3S4R1G7 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
H2afb3S4R1G7 Gm11249-201ENSMUST00000117071 859 ntBASIC15.37■□□□□ 0.05
H2afb3S4R1G7 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC15.37■□□□□ 0.05
H2afb3S4R1G7 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
H2afb3S4R1G7 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
H2afb3S4R1G7 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC15.37■□□□□ 0.05
H2afb3S4R1G7 AC163280.1-201ENSMUST00000228194 1100 ntBASIC15.37■□□□□ 0.05
H2afb3S4R1G7 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
H2afb3S4R1G7 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
H2afb3S4R1G7 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
H2afb3S4R1G7 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
H2afb3S4R1G7 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
H2afb3S4R1G7 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
H2afb3S4R1G7 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
H2afb3S4R1G7 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
H2afb3S4R1G7 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
H2afb3S4R1G7 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
H2afb3S4R1G7 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
H2afb3S4R1G7 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.36■□□□□ 0.05
H2afb3S4R1G7 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
H2afb3S4R1G7 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
H2afb3S4R1G7 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.36■□□□□ 0.05
H2afb3S4R1G7 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
H2afb3S4R1G7 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.36■□□□□ 0.05
H2afb3S4R1G7 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
H2afb3S4R1G7 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
H2afb3S4R1G7 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC15.36■□□□□ 0.05
H2afb3S4R1G7 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
H2afb3S4R1G7 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
H2afb3S4R1G7 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
H2afb3S4R1G7 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
H2afb3S4R1G7 Gm19721-201ENSMUST00000195284 1764 ntBASIC15.36■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms