Protein–RNA interactions for Protein: Q9Z2Q5

Mrpl40, 39S ribosomal protein L40, mitochondrial, mousemouse

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl40Q9Z2Q5 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mrpl40Q9Z2Q5 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mrpl40Q9Z2Q5 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mrpl40Q9Z2Q5 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mrpl40Q9Z2Q5 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mrpl40Q9Z2Q5 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mrpl40Q9Z2Q5 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Mrpl40Q9Z2Q5 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Mrpl40Q9Z2Q5 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mrpl40Q9Z2Q5 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mrpl40Q9Z2Q5 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mrpl40Q9Z2Q5 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Mrpl40Q9Z2Q5 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mrpl40Q9Z2Q5 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mrpl40Q9Z2Q5 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mrpl40Q9Z2Q5 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mrpl40Q9Z2Q5 Mir2861-201ENSMUST00000175539 82 ntBASIC17.11■□□□□ 0.33
Mrpl40Q9Z2Q5 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mrpl40Q9Z2Q5 Gm7889-201ENSMUST00000185591 958 ntBASIC17.11■□□□□ 0.33
Mrpl40Q9Z2Q5 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.11■□□□□ 0.33
Mrpl40Q9Z2Q5 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mrpl40Q9Z2Q5 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mrpl40Q9Z2Q5 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mrpl40Q9Z2Q5 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Mrpl40Q9Z2Q5 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mrpl40Q9Z2Q5 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mrpl40Q9Z2Q5 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mrpl40Q9Z2Q5 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mrpl40Q9Z2Q5 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mrpl40Q9Z2Q5 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mrpl40Q9Z2Q5 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Mrpl40Q9Z2Q5 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Mrpl40Q9Z2Q5 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.1■□□□□ 0.33
Mrpl40Q9Z2Q5 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mrpl40Q9Z2Q5 Gm12085-201ENSMUST00000119263 940 ntBASIC17.1■□□□□ 0.33
Mrpl40Q9Z2Q5 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.1■□□□□ 0.33
Mrpl40Q9Z2Q5 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mrpl40Q9Z2Q5 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mrpl40Q9Z2Q5 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mrpl40Q9Z2Q5 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.1■□□□□ 0.33
Mrpl40Q9Z2Q5 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Mrpl40Q9Z2Q5 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mrpl40Q9Z2Q5 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mrpl40Q9Z2Q5 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mrpl40Q9Z2Q5 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mrpl40Q9Z2Q5 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mrpl40Q9Z2Q5 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mrpl40Q9Z2Q5 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mrpl40Q9Z2Q5 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.09■□□□□ 0.33
Mrpl40Q9Z2Q5 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.09■□□□□ 0.33
Mrpl40Q9Z2Q5 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Mrpl40Q9Z2Q5 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Mrpl40Q9Z2Q5 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.09■□□□□ 0.33
Mrpl40Q9Z2Q5 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mrpl40Q9Z2Q5 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mrpl40Q9Z2Q5 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Mrpl40Q9Z2Q5 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mrpl40Q9Z2Q5 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mrpl40Q9Z2Q5 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mrpl40Q9Z2Q5 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mrpl40Q9Z2Q5 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Mrpl40Q9Z2Q5 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Mrpl40Q9Z2Q5 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Mrpl40Q9Z2Q5 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mrpl40Q9Z2Q5 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mrpl40Q9Z2Q5 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Mrpl40Q9Z2Q5 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Mrpl40Q9Z2Q5 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.08■□□□□ 0.33
Mrpl40Q9Z2Q5 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Mrpl40Q9Z2Q5 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Mrpl40Q9Z2Q5 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Mrpl40Q9Z2Q5 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Mrpl40Q9Z2Q5 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Mrpl40Q9Z2Q5 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC17.08■□□□□ 0.32
Mrpl40Q9Z2Q5 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Mrpl40Q9Z2Q5 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.08■□□□□ 0.32
Mrpl40Q9Z2Q5 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Mrpl40Q9Z2Q5 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.08■□□□□ 0.32
Mrpl40Q9Z2Q5 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Mrpl40Q9Z2Q5 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Mrpl40Q9Z2Q5 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Mrpl40Q9Z2Q5 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Mrpl40Q9Z2Q5 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Mrpl40Q9Z2Q5 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Mrpl40Q9Z2Q5 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Mrpl40Q9Z2Q5 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Mrpl40Q9Z2Q5 Haglr-201ENSMUST00000100000 2085 ntBASIC17.08■□□□□ 0.32
Mrpl40Q9Z2Q5 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Mrpl40Q9Z2Q5 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mrpl40Q9Z2Q5 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mrpl40Q9Z2Q5 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Mrpl40Q9Z2Q5 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mrpl40Q9Z2Q5 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.07■□□□□ 0.32
Mrpl40Q9Z2Q5 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Mrpl40Q9Z2Q5 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.07■□□□□ 0.32
Mrpl40Q9Z2Q5 Gm10517-202ENSMUST00000192970 758 ntBASIC17.07■□□□□ 0.32
Mrpl40Q9Z2Q5 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Mrpl40Q9Z2Q5 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.07■□□□□ 0.32
Mrpl40Q9Z2Q5 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mrpl40Q9Z2Q5 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms