Protein–RNA interactions for Protein: Q9Z2L7

Crlf3, Cytokine receptor-like factor 3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf3Q9Z2L7 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Crlf3Q9Z2L7 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Crlf3Q9Z2L7 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.32■□□□□ 0.36
Crlf3Q9Z2L7 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.32■□□□□ 0.36
Crlf3Q9Z2L7 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Crlf3Q9Z2L7 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Crlf3Q9Z2L7 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Crlf3Q9Z2L7 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Crlf3Q9Z2L7 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Crlf3Q9Z2L7 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Crlf3Q9Z2L7 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Crlf3Q9Z2L7 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Crlf3Q9Z2L7 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Crlf3Q9Z2L7 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.31■□□□□ 0.36
Crlf3Q9Z2L7 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Crlf3Q9Z2L7 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.31■□□□□ 0.36
Crlf3Q9Z2L7 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Crlf3Q9Z2L7 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Crlf3Q9Z2L7 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Crlf3Q9Z2L7 Gm13216-201ENSMUST00000117145 591 ntBASIC17.31■□□□□ 0.36
Crlf3Q9Z2L7 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.31■□□□□ 0.36
Crlf3Q9Z2L7 Gm38285-201ENSMUST00000192928 922 ntBASIC17.31■□□□□ 0.36
Crlf3Q9Z2L7 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.31■□□□□ 0.36
Crlf3Q9Z2L7 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.31■□□□□ 0.36
Crlf3Q9Z2L7 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.31■□□□□ 0.36
Crlf3Q9Z2L7 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Crlf3Q9Z2L7 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Crlf3Q9Z2L7 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Crlf3Q9Z2L7 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Crlf3Q9Z2L7 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Crlf3Q9Z2L7 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Crlf3Q9Z2L7 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Crlf3Q9Z2L7 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Crlf3Q9Z2L7 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Crlf3Q9Z2L7 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Crlf3Q9Z2L7 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Crlf3Q9Z2L7 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Crlf3Q9Z2L7 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.3■□□□□ 0.36
Crlf3Q9Z2L7 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Crlf3Q9Z2L7 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Crlf3Q9Z2L7 Gm6365-201ENSMUST00000054711 744 ntBASIC17.3■□□□□ 0.36
Crlf3Q9Z2L7 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Crlf3Q9Z2L7 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Crlf3Q9Z2L7 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.3■□□□□ 0.36
Crlf3Q9Z2L7 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Crlf3Q9Z2L7 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Crlf3Q9Z2L7 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Crlf3Q9Z2L7 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Crlf3Q9Z2L7 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Crlf3Q9Z2L7 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Crlf3Q9Z2L7 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Crlf3Q9Z2L7 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Crlf3Q9Z2L7 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Crlf3Q9Z2L7 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Crlf3Q9Z2L7 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Crlf3Q9Z2L7 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Crlf3Q9Z2L7 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Crlf3Q9Z2L7 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Crlf3Q9Z2L7 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Crlf3Q9Z2L7 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Crlf3Q9Z2L7 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Crlf3Q9Z2L7 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Crlf3Q9Z2L7 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Crlf3Q9Z2L7 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Crlf3Q9Z2L7 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Crlf3Q9Z2L7 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Crlf3Q9Z2L7 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Crlf3Q9Z2L7 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Crlf3Q9Z2L7 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Crlf3Q9Z2L7 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.28■□□□□ 0.36
Crlf3Q9Z2L7 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Crlf3Q9Z2L7 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Crlf3Q9Z2L7 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Crlf3Q9Z2L7 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Crlf3Q9Z2L7 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.28■□□□□ 0.36
Crlf3Q9Z2L7 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Crlf3Q9Z2L7 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.28■□□□□ 0.36
Crlf3Q9Z2L7 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.28■□□□□ 0.36
Crlf3Q9Z2L7 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.28■□□□□ 0.36
Crlf3Q9Z2L7 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.28■□□□□ 0.36
Crlf3Q9Z2L7 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Crlf3Q9Z2L7 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Crlf3Q9Z2L7 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Crlf3Q9Z2L7 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Crlf3Q9Z2L7 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Crlf3Q9Z2L7 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Crlf3Q9Z2L7 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Crlf3Q9Z2L7 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Crlf3Q9Z2L7 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Crlf3Q9Z2L7 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Crlf3Q9Z2L7 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Crlf3Q9Z2L7 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Crlf3Q9Z2L7 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Crlf3Q9Z2L7 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Crlf3Q9Z2L7 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Crlf3Q9Z2L7 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Crlf3Q9Z2L7 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.27■□□□□ 0.36
Crlf3Q9Z2L7 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Crlf3Q9Z2L7 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Crlf3Q9Z2L7 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms