Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cldn9Q9Z0S7 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cldn9Q9Z0S7 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cldn9Q9Z0S7 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.46■□□□□ 0.23
Cldn9Q9Z0S7 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cldn9Q9Z0S7 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cldn9Q9Z0S7 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cldn9Q9Z0S7 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Cldn9Q9Z0S7 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cldn9Q9Z0S7 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Cldn9Q9Z0S7 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.46■□□□□ 0.22
Cldn9Q9Z0S7 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cldn9Q9Z0S7 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cldn9Q9Z0S7 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cldn9Q9Z0S7 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cldn9Q9Z0S7 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cldn9Q9Z0S7 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cldn9Q9Z0S7 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cldn9Q9Z0S7 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Cldn9Q9Z0S7 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cldn9Q9Z0S7 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC16.45■□□□□ 0.22
Cldn9Q9Z0S7 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cldn9Q9Z0S7 Gm8520-201ENSMUST00000186517 868 ntBASIC16.45■□□□□ 0.22
Cldn9Q9Z0S7 Gm37025-201ENSMUST00000195159 829 ntBASIC16.45■□□□□ 0.22
Cldn9Q9Z0S7 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Cldn9Q9Z0S7 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Cldn9Q9Z0S7 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cldn9Q9Z0S7 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cldn9Q9Z0S7 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cldn9Q9Z0S7 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Cldn9Q9Z0S7 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cldn9Q9Z0S7 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cldn9Q9Z0S7 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
Cldn9Q9Z0S7 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
Cldn9Q9Z0S7 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cldn9Q9Z0S7 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cldn9Q9Z0S7 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cldn9Q9Z0S7 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Cldn9Q9Z0S7 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cldn9Q9Z0S7 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cldn9Q9Z0S7 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
Cldn9Q9Z0S7 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cldn9Q9Z0S7 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cldn9Q9Z0S7 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cldn9Q9Z0S7 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
Cldn9Q9Z0S7 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Cldn9Q9Z0S7 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Cldn9Q9Z0S7 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.44■□□□□ 0.22
Cldn9Q9Z0S7 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Cldn9Q9Z0S7 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cldn9Q9Z0S7 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Cldn9Q9Z0S7 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cldn9Q9Z0S7 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cldn9Q9Z0S7 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cldn9Q9Z0S7 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cldn9Q9Z0S7 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cldn9Q9Z0S7 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cldn9Q9Z0S7 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Cldn9Q9Z0S7 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC16.43■□□□□ 0.22
Cldn9Q9Z0S7 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cldn9Q9Z0S7 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cldn9Q9Z0S7 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Cldn9Q9Z0S7 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cldn9Q9Z0S7 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Cldn9Q9Z0S7 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.43■□□□□ 0.22
Cldn9Q9Z0S7 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cldn9Q9Z0S7 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
Cldn9Q9Z0S7 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.42■□□□□ 0.22
Cldn9Q9Z0S7 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cldn9Q9Z0S7 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cldn9Q9Z0S7 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cldn9Q9Z0S7 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cldn9Q9Z0S7 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cldn9Q9Z0S7 Gm17661-201ENSMUST00000170317 270 ntBASIC16.42■□□□□ 0.22
Cldn9Q9Z0S7 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cldn9Q9Z0S7 AC154649.1-201ENSMUST00000227392 384 ntBASIC16.42■□□□□ 0.22
Cldn9Q9Z0S7 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.42■□□□□ 0.22
Cldn9Q9Z0S7 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cldn9Q9Z0S7 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cldn9Q9Z0S7 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cldn9Q9Z0S7 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cldn9Q9Z0S7 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.42■□□□□ 0.22
Cldn9Q9Z0S7 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cldn9Q9Z0S7 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
Cldn9Q9Z0S7 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Cldn9Q9Z0S7 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Cldn9Q9Z0S7 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cldn9Q9Z0S7 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cldn9Q9Z0S7 Mir1199-201ENSMUST00000117015 119 ntBASIC16.41■□□□□ 0.22
Cldn9Q9Z0S7 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cldn9Q9Z0S7 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.41■□□□□ 0.22
Cldn9Q9Z0S7 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC16.41■□□□□ 0.22
Cldn9Q9Z0S7 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC16.41■□□□□ 0.22
Cldn9Q9Z0S7 AC175538.1-201ENSMUST00000225343 1269 ntBASIC16.41■□□□□ 0.22
Cldn9Q9Z0S7 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cldn9Q9Z0S7 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cldn9Q9Z0S7 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Cldn9Q9Z0S7 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Cldn9Q9Z0S7 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cldn9Q9Z0S7 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms