Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cldn3Q9Z0G9 Gm3375-201ENSMUST00000203929 796 ntBASIC17.31■□□□□ 0.36
Cldn3Q9Z0G9 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cldn3Q9Z0G9 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cldn3Q9Z0G9 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cldn3Q9Z0G9 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cldn3Q9Z0G9 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cldn3Q9Z0G9 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cldn3Q9Z0G9 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cldn3Q9Z0G9 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.31■□□□□ 0.36
Cldn3Q9Z0G9 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cldn3Q9Z0G9 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cldn3Q9Z0G9 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cldn3Q9Z0G9 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cldn3Q9Z0G9 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Cldn3Q9Z0G9 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.3■□□□□ 0.36
Cldn3Q9Z0G9 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Cldn3Q9Z0G9 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cldn3Q9Z0G9 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cldn3Q9Z0G9 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cldn3Q9Z0G9 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.3■□□□□ 0.36
Cldn3Q9Z0G9 Gm17661-201ENSMUST00000170317 270 ntBASIC17.3■□□□□ 0.36
Cldn3Q9Z0G9 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cldn3Q9Z0G9 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.3■□□□□ 0.36
Cldn3Q9Z0G9 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cldn3Q9Z0G9 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cldn3Q9Z0G9 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cldn3Q9Z0G9 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cldn3Q9Z0G9 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Cldn3Q9Z0G9 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cldn3Q9Z0G9 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cldn3Q9Z0G9 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cldn3Q9Z0G9 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Cldn3Q9Z0G9 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cldn3Q9Z0G9 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cldn3Q9Z0G9 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.29■□□□□ 0.36
Cldn3Q9Z0G9 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cldn3Q9Z0G9 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cldn3Q9Z0G9 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.29■□□□□ 0.36
Cldn3Q9Z0G9 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cldn3Q9Z0G9 Gm7638-201ENSMUST00000121348 967 ntBASIC17.29■□□□□ 0.36
Cldn3Q9Z0G9 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cldn3Q9Z0G9 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.29■□□□□ 0.36
Cldn3Q9Z0G9 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cldn3Q9Z0G9 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cldn3Q9Z0G9 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cldn3Q9Z0G9 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cldn3Q9Z0G9 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cldn3Q9Z0G9 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cldn3Q9Z0G9 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cldn3Q9Z0G9 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Cldn3Q9Z0G9 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cldn3Q9Z0G9 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cldn3Q9Z0G9 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cldn3Q9Z0G9 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cldn3Q9Z0G9 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cldn3Q9Z0G9 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cldn3Q9Z0G9 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Cldn3Q9Z0G9 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Cldn3Q9Z0G9 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.29■□□□□ 0.36
Cldn3Q9Z0G9 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Cldn3Q9Z0G9 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cldn3Q9Z0G9 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Cldn3Q9Z0G9 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Cldn3Q9Z0G9 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cldn3Q9Z0G9 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cldn3Q9Z0G9 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.28■□□□□ 0.36
Cldn3Q9Z0G9 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cldn3Q9Z0G9 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cldn3Q9Z0G9 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cldn3Q9Z0G9 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cldn3Q9Z0G9 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cldn3Q9Z0G9 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cldn3Q9Z0G9 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cldn3Q9Z0G9 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.28■□□□□ 0.36
Cldn3Q9Z0G9 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.28■□□□□ 0.36
Cldn3Q9Z0G9 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.28■□□□□ 0.36
Cldn3Q9Z0G9 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.28■□□□□ 0.36
Cldn3Q9Z0G9 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cldn3Q9Z0G9 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.28■□□□□ 0.36
Cldn3Q9Z0G9 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cldn3Q9Z0G9 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Cldn3Q9Z0G9 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.28■□□□□ 0.36
Cldn3Q9Z0G9 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cldn3Q9Z0G9 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cldn3Q9Z0G9 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cldn3Q9Z0G9 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Cldn3Q9Z0G9 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
Cldn3Q9Z0G9 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cldn3Q9Z0G9 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.27■□□□□ 0.36
Cldn3Q9Z0G9 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cldn3Q9Z0G9 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.27■□□□□ 0.36
Cldn3Q9Z0G9 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cldn3Q9Z0G9 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
Cldn3Q9Z0G9 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cldn3Q9Z0G9 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cldn3Q9Z0G9 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Cldn3Q9Z0G9 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Cldn3Q9Z0G9 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.27■□□□□ 0.36
Cldn3Q9Z0G9 Gm9731-201ENSMUST00000209480 747 ntBASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms