Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
ClcnkaQ9WUB7 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ClcnkaQ9WUB7 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ClcnkaQ9WUB7 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ClcnkaQ9WUB7 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
ClcnkaQ9WUB7 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ClcnkaQ9WUB7 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
ClcnkaQ9WUB7 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
ClcnkaQ9WUB7 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ClcnkaQ9WUB7 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC15.74■□□□□ 0.11
ClcnkaQ9WUB7 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ClcnkaQ9WUB7 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC15.74■□□□□ 0.11
ClcnkaQ9WUB7 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC15.74■□□□□ 0.11
ClcnkaQ9WUB7 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC15.74■□□□□ 0.11
ClcnkaQ9WUB7 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC15.74■□□□□ 0.11
ClcnkaQ9WUB7 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC15.74■□□□□ 0.11
ClcnkaQ9WUB7 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC15.74■□□□□ 0.11
ClcnkaQ9WUB7 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ClcnkaQ9WUB7 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ClcnkaQ9WUB7 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
ClcnkaQ9WUB7 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
ClcnkaQ9WUB7 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
ClcnkaQ9WUB7 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
ClcnkaQ9WUB7 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
ClcnkaQ9WUB7 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ClcnkaQ9WUB7 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ClcnkaQ9WUB7 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ClcnkaQ9WUB7 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
ClcnkaQ9WUB7 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
ClcnkaQ9WUB7 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ClcnkaQ9WUB7 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC15.73■□□□□ 0.11
ClcnkaQ9WUB7 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ClcnkaQ9WUB7 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
ClcnkaQ9WUB7 AC175538.1-201ENSMUST00000225343 1269 ntBASIC15.73■□□□□ 0.11
ClcnkaQ9WUB7 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
ClcnkaQ9WUB7 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
ClcnkaQ9WUB7 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ClcnkaQ9WUB7 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC15.73■□□□□ 0.11
ClcnkaQ9WUB7 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
ClcnkaQ9WUB7 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
ClcnkaQ9WUB7 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
ClcnkaQ9WUB7 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ClcnkaQ9WUB7 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
ClcnkaQ9WUB7 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ClcnkaQ9WUB7 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ClcnkaQ9WUB7 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ClcnkaQ9WUB7 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
ClcnkaQ9WUB7 Arhgef33-211ENSMUST00000225658 473 ntBASIC15.72■□□□□ 0.11
ClcnkaQ9WUB7 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ClcnkaQ9WUB7 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
ClcnkaQ9WUB7 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ClcnkaQ9WUB7 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
ClcnkaQ9WUB7 AC125311.2-201ENSMUST00000227477 1940 ntBASIC15.72■□□□□ 0.11
ClcnkaQ9WUB7 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
ClcnkaQ9WUB7 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
ClcnkaQ9WUB7 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
ClcnkaQ9WUB7 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ClcnkaQ9WUB7 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
ClcnkaQ9WUB7 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC15.71■□□□□ 0.11
ClcnkaQ9WUB7 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ClcnkaQ9WUB7 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
ClcnkaQ9WUB7 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
ClcnkaQ9WUB7 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ClcnkaQ9WUB7 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ClcnkaQ9WUB7 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC15.71■□□□□ 0.11
ClcnkaQ9WUB7 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC15.71■□□□□ 0.11
ClcnkaQ9WUB7 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC15.71■□□□□ 0.11
ClcnkaQ9WUB7 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC15.71■□□□□ 0.11
ClcnkaQ9WUB7 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
ClcnkaQ9WUB7 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ClcnkaQ9WUB7 Gm7712-202ENSMUST00000222331 1510 ntBASIC15.71■□□□□ 0.11
ClcnkaQ9WUB7 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
ClcnkaQ9WUB7 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ClcnkaQ9WUB7 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ClcnkaQ9WUB7 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
ClcnkaQ9WUB7 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
ClcnkaQ9WUB7 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
ClcnkaQ9WUB7 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
ClcnkaQ9WUB7 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.1
ClcnkaQ9WUB7 Gm45774-201ENSMUST00000211992 2665 ntBASIC15.71■□□□□ 0.1
ClcnkaQ9WUB7 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
ClcnkaQ9WUB7 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
ClcnkaQ9WUB7 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
ClcnkaQ9WUB7 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
ClcnkaQ9WUB7 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ClcnkaQ9WUB7 Gm37812-201ENSMUST00000195216 2475 ntBASIC15.7■□□□□ 0.1
ClcnkaQ9WUB7 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
ClcnkaQ9WUB7 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC15.7■□□□□ 0.1
ClcnkaQ9WUB7 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
ClcnkaQ9WUB7 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ClcnkaQ9WUB7 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ClcnkaQ9WUB7 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ClcnkaQ9WUB7 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC15.7■□□□□ 0.1
ClcnkaQ9WUB7 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ClcnkaQ9WUB7 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ClcnkaQ9WUB7 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ClcnkaQ9WUB7 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
ClcnkaQ9WUB7 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ClcnkaQ9WUB7 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ClcnkaQ9WUB7 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms